Carassius gibelio (silver crucian carp): 127969277
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Entry
127969277 CDS
T08819
Name
(RefSeq) ran GTPase-activating protein 1b
KO
K14319
Ran GTPase-activating protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127969277
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127969277
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
127969277
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
LRR_8
NTS_TR130
BSP_II
Motif
Other DBs
NCBI-GeneID:
127969277
NCBI-ProteinID:
XP_052427085
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All DBs
Position
B12:complement(13121393..13128636)
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AA seq
567 aa
AA seq
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MASGDIAQITEALAKTHVGEVELSYKGQGLKLDHAESVKEMVKEIEGCQGLQSLRLEGNT
LGVEAAQAIAKSLEAKRELEQCHWSDLFTGRLRSEIPPALKSLGYSLMTSGARLTLLDLS
DNAFGPDGVKGIESLLKSAACYTLLELRLNNCGMGIGGGMVLASALTECHKQSSAAGSPL
RLKVFIAGRNRLENDGAAALAKAFKLLGSLEEVYMPQNGINHLGITALATAIKHNPNLQV
LNLNDNTFTKRGSIAMAEAIRHLQCLKVINFGDCLVRSEGAIAIAGALREGLPFLRELNL
SFGEICEAAAVVVAKAVRGKSDLEKLDLNGNCFGEEGCEALREVMESMNMEDLLGTLSDD
EGEPEDDDEEEEEEEDEEEKEDEVHTEENGVNGTKDVIEEKEEPRCTSELTSFLISPSAE
KLISLGAKRIQLIEQQVDVSDASKVSEIFLKISSVYKDEPEVKQAIFESTDALLRKAFSN
SHSQSYSFISSLIVNLGLLKSEDKKIKKVAVLPGHLLALEHAAAQEFFPADQAEVLEEFV
SRNGKVLESCCNARDVLKTTLVKRTTA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcttctggagatattgctcagattacagaggcgctggccaaaactcatgttggagaa
gtggaattaagctataagggacaagggctgaagttggaccatgctgagtcagtgaaagag
atggtgaaggagatcgaggggtgtcagggactgcagtctctcagattagagggaaacaca
ttgggggttgaagcagcacaggcaattgcaaaatctcttgaagcgaaaagggaattggag
caatgccactggagtgacttgttcacgggtcgccttcgctctgaaattccacctgctctg
aaatcattgggctattctttgatgacatcgggggccagactgactcttctggacttgagc
gacaatgcctttggccctgacggtgtaaagggaattgaaagccttctgaagagcgctgca
tgctacactttacttgagctcaggcttaataattgtggcatgggcatcggagggggtatg
gtccttgcttctgctttgactgaatgtcacaagcagtctagtgcagctggctctcccctg
aggttaaaagtcttcatcgctggacgtaatcggctggagaatgatggtgctgctgcactt
gccaaagcatttaagttgttgggcagtcttgaagaggtctatatgccacagaatggaatc
aaccatcttggcatcactgctttagccactgccataaagcacaacccaaaccttcaggtc
ctcaacctcaacgacaacacttttactaagagaggatcgatagccatggcggaggctatt
aggcacctccagtgtcttaaagtcatcaattttggggattgtttggttcgctcagaaggt
gcgattgctatagcaggggcccttagagagggactgccattcctcagggagctgaatttg
tcatttggagagatatgtgaggctgcagctgtggtagttgcaaaggctgttcggggcaaa
tctgatctggagaaactggacctgaatggaaattgctttggagaggaaggctgtgaggct
ctcagggaagtgatggagagcatgaacatggaagatctgctgggcacgctcagtgatgat
gaaggagagcctgaagatgatgatgaggaggaggaggaggaggaagatgaagaagagaag
gaagatgaagtgcatacagaggaaaatggtgtcaatggaacaaaagatgtaattgaagaa
aaggaggagcctcgctgcacttctgagctcacgtctttcctcatctcaccgtcagctgag
aaactgatctcccttggagccaaaaggatccagctcatagagcagcaggttgacgtctcc
gatgctagcaaggtttcagaaatttttctcaagatttcatcagtatacaaagatgaacca
gaagtaaagcaagcaatatttgagagcactgatgccctgttgaggaaagccttttccaac
tcccactctcaatcctattcttttatctcctcactgatagtgaacctgggacttttaaag
agtgaagataagaagataaagaaggtagctgtactgcctggacacttacttgctttggag
cacgcagctgcacaagagtttttcccagcagatcaggctgaagttctggaagaatttgtg
tcacgaaatggcaaagtcttagaatcctgctgcaatgccagagatgttctcaagaccaca
ttagtgaaaaggaccactgcttaa
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