Carassius gibelio (silver crucian carp): 127969372
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Entry
127969372 CDS
T08819
Name
(RefSeq) ras-related protein Rab-40B
KO
K07928
Ras-related protein Rab-40
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127969372
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cgib04031
]
127969372
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
127969372
GTP-binding proteins [BR:
cgib04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
127969372
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
127969372
NCBI-ProteinID:
XP_052427220
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All DBs
Position
B12:7161666..7177531
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AA seq
286 aa
AA seq
DB search
MGHRADVKMNHRSSPAKAYDFLLKFLLVGDSDVGKGEILASLQDGSSESPYGYNMGIDYK
TTTILLDGRRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEI
DEHAPGVPKILVGNRLHLAYKRQVTTEHAQAFAERLGVTFFEVSPLCNFNITESFTELAR
IVLMRHGMERLWRPNKVLSLQDLCCRSIVSCTPVHLVDKLPLPIALKSHLKSFSMANGLN
ARMMHGRSYSVIASSAKKRNGTKKSKIIYPPLSPSQNCARTSCKIS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatcgggctgatgtgaagatgaaccacaggagcagcccagcaaaagcttatgat
ttcctcctgaaattcctgctggtgggagacagtgatgttgggaaaggggaaatactggcc
agtctacaggatggatccagtgagtcaccctatggatacaatatgggaattgactacaag
acaactaccatactgctcgatggacgcagagtcaaactccagctttgggacacctcagga
caaggcagattctgcaccatattccgctcatattccagaggagcacagggcgttatcctt
gtatatgacatcacaaaccggtggtcttttgacggcatcgacagatggattaaagagatc
gatgagcatgcaccaggtgttcccaagatcctggtgggaaacaggcttcacctggcctat
aagcgtcaggtgacaaccgagcacgcccaggcttttgcagagcgactgggggtcacattc
ttcgaggtcagccctctctgtaacttcaacattactgagtccttcactgagctggcccga
atcgtgcttatgaggcatggtatggagcgactttggagacccaataaagtgttgagtctg
caggatctgtgctgtcgttctatcgtttcctgcactccagtgcaccttgtggacaaactt
ccccttcctattgccttaaagagccatctgaagtccttctccatggccaacggcctcaac
gccaggatgatgcacggccgttcctactcggtcatagccagcagcgctaaaaaaaggaac
ggaaccaaaaaatccaaaatcatctacccacccctgagcccatcccagaactgtgcacgg
acaagctgcaagatttcatag
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