Carassius gibelio (silver crucian carp): 127969387
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Entry
127969387 CDS
T08819
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127969387
03036 Chromosome and associated proteins [BR:
cgib03036
]
127969387
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127969387
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Gene silencing
piRNA pathway
127969387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
127969387
NCBI-ProteinID:
XP_052427246
LinkDB
All DBs
Position
B12:13289962..13326954
Genome browser
AA seq
1992 aa
AA seq
DB search
MEDKKRKKEDKRKRETSQKVAEQKNKVPELTKPPSAQSPATPNSASPSPGPVLSSTPSTA
TAAAGALPQGGNNAKRPAVANGTPSPSTQNSQRYMPREVPPRFRCQQDHKVLLKRGQPPL
SSMLLGGGNSGGDSPNETVASASDPIQGLLGPAAPSLPHTSSSSSSIAASSSSNYANSMW
GNSSGSQPLSQGREKMIVDRSDLEEWPSIAAGDGSKAGDTAGTGGADSSGILNCSTSWGE
RHLQQQPKVVGGGNGRKGVNSGSPSPPTSSGSPNECMQSGSVWASSSHELIGGNAVAAGS
LPPISKAATLPGGSDSSLGVSCGIPGANFNPNANPSAWPALVQEGAGTVATEGGSSSLQS
SSLSASNPLSVNQASHQHQLHQMQSRDRDPPCGEWGGAALEPGAGPKNKGLTEAAEINSG
STGGGDGSTSSSSSTSSSFWRAQPFPANSKTGASRTESWEDGAGGSSGSAEGRKAWGYAS
QDDQGDLTGASAWGTASGGQTPGVSQGAWGGDHMLVGEWGASSGVGAVNNPGGKDGSSSN
SSSGGSVGNPTTSSSTPSTMTRAWDNQKGVGDVGAGDSSEWGGRGSRGGGGTSSSSGGGN
SRSGNQHHGLHRTHQPLNPEVTLQNLLSRSDLDPRVLSNSGWGQTQIRQNVAWDLEGGGG
KVAPGGAESSSAMSAPAPTQPYSGLSTTTTTDPSSSSLLQDAALDANLNSNSILGPPAAS
PGEGWDNSSSNGSSSLHVRGPPPSGVNIQNPAVSQSVGVVSSSVGGQGKPPGGWGGTATS
EGKGKDWDSEGNEWREFRTGSSSGRWGDFQTQGTPSTGGSGWGDSQEDKRKGSWKEVGRG
DVGNWGTRGNSDWGENEPKSCSGGWGDGKSSGGTSGDSEVGTWVSWDGETSRGAWGTGGT
GSGGDMGGKSHQGWGGKMHQSQMPNSQLASQKGPAQQQQQQQSQPQQCQSVDTGAMQGSW
GRPAGPSAQSQSSGWTSGPIPQVSSGSGDTSEPSGWEEPSPQSISRKMEIDDGTSAWGDP
SKYNNKSVWDKNNAPSVQAQSVSPQQGPPTLQQQPPGRMPTGLGNRDMNLTHSANKGPGI
ASSGWGGSDSPSSPCVDNGTAAWGKPTEAPTSWCDPDDTGKSPGWGDPSPNPVNSGSKSM
QEGWGEGEVSVSASRHSSWEEDESGGVWNSAGSQGSSSSYNSGGWGAKKANKGSLKGAGD
SWMNPMTRQFSNMGILGEDPTGRSLDLAPGPPQDKKIEGEKRGMGLNEYNGEMRKGGRGG
GAGVVFRSPGSKEVGACEPGPYYDKVSGQLFSSGGGMGQSRHQPGVPPINPSVRAQVPHQ
FLSPQVPGSVLKQMPPPSGGVGGGIFPPQLSPQHIAMLNSIYPHHIQFQLACQLLLQQQP
QQQQQQLLQNQRKFPPNIRQQADPQQLARIMAVLQQQRQQQQHLGGPGGGSKLSPSHLGG
GGPKMPMSDPLSHPGLAASVADLHQKTQGTYSGFGPGVSLPGLELGPMVGGPTGIKDSGG
QQSRFKWMMEGHSPAPSPPDVTLHKNGPIAAPLKMRGGSPYSQYEMLGGEGLGVPPQGPS
DHWHRSPGNKMGAKTGTSSWPPEFQPGVPWKGIQSVDPESDPYMTPGSMLGSSMSSLNDN
EHQLLRDNTESNPSLNTLLPSPGAWPYSASESPLNNAHNQAKYTTDYKGSWPLEPIGHNK
PWKTNRNNSHLPRPPPGLSHQKQHSVSPWTGGGPRFGRGWGGTGGGQESKFGPGSAWSDG
GASKGSCWLVLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGSALIRYSTRQEAAKAQS
ALHMCVLGNTTILAEFVSEEEVARYFAHSQTGAGGSSGGGSGAGGVAVSGPAGMTGSSGA
GAVGTISTGSGERERAGVGSLTTGGSNNAGGPGPSGSTWQSLEGTGSSPDPASAQGAGLS
IFTQWSSNGAGGSVGSNTGGVDPGRAGLWSGMTPGYTSSSLWGSPAMEDRHQMSSPAALL
PGDLLGGGADSI
NT seq
5979 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaggaaaaaggaagataaaaggaaacgggaaacctcacagaaggtt
gcagagcaaaaaaataaagtgccagaattgaccaagcctccatcagcacagtctcctgcc
acccccaactcagcttcccccagccctggacccgtcctctcttcaaccccatccactgcc
accgcggctgctggcgccctccctcagggtgggaacaatgctaagcggccggcggtggcc
aacggaacgccctcccccagcacacagaattctcagcgctacatgccccgtgaagtgccc
cctcgattccgttgccagcaggaccataaagtgctactgaagaggggtcagccaccactg
tcctccatgctgctggggggaggcaacagcgggggagacagccccaatgaaacagtggct
tctgcctcagatccaatccagggccttttgggtccagctgctccctcactgccccatacg
tcatcctcctcctcatcaatcgctgcttcttcttcttcaaattatgcaaattccatgtgg
gggaacagctctggcagccaacccctctctcagggcagagaaaagatgatagtggatcgg
tcagacctggaggaatggcccagtattgctgctggggatgggtcaaaggcaggggataca
gcaggaaccggaggtgcggacagtagcggaattctgaactgcagcacctcatggggtgag
aggcatctccagcagcaaccgaaagttgtgggaggaggaaacgggaggaaaggagtgaat
tctggcagcccttccccacccacatcctccggttcaccaaatgaatgtatgcagtctggt
agtgtttgggcttcatcctcccatgaactaataggggggaatgcagtagcagcaggctca
ttgccccccatatccaaagctgccactctaccagggggctccgatagctcccttggtgtt
agctgtgggattccaggtgccaattttaaccctaatgccaatccttctgcttggcctgcc
ctggtacaggaaggggctgggacagttgcaacagagggtggctcctcttccctccaaagc
tcatctttgtctgccagcaaccctctttctgtgaatcaagcctctcatcagcaccaactt
caccaaatgcaatccagagacagagatccaccctgtggagagtggggtggtgcagcactg
gaaccaggagcaggaccaaaaaacaaagggttgacagaggcggctgaaattaactctgga
agcacaggtggaggggacggctccacttcatcttcctcctccaccagctcatcattttgg
agagctcagcctttccctgcaaactccaaaacgggtgcctcaaggactgaatcttgggag
gatggagcaggagggagctctgggtctgctgaaggcagaaaagcatggggttatgccagt
caggatgatcaaggagatttgacaggggcaagtgcgtggggaactgcaagtgggggtcag
acccccggggtatctcagggagcatggggtggggaccatatgttggttggggaatggggg
gcatcaagtggtgttggggctgtcaacaatccaggtgggaaagatggttcgagcagtaac
agcagcagcggtggcagtgtcggtaacccgacgacttcctcctccacaccttcaactatg
acaagagcttgggacaatcagaaaggtgttggggatgtaggagcaggagactcaagtgag
tggggaggccggggtagcagaggtgggggaggtacctcatcctccagtggcggaggaaac
tccagaagtggcaatcagcaccatggcctccaccgcactcatcaacctctcaaccctgaa
gtgaccttacagaatctgcttagccggtctgacttggatccaagagtgctgtccaactct
ggttggggtcagacacaaatccgtcagaatgtggcatgggatttggagggaggaggcgga
aaagtggcaccaggtggagcagaatcctcatctgcaatgagtgcacctgcccccactcaa
ccgtactctggtttatccaccaccacaactactgatccatcttcctcctctctgctgcaa
gatgcagctctagatgccaacttgaactcaaactccatcctcgggccgcctgctgcttcc
cctggtgaaggttgggataacagtagtagcaacggcagttcttctttgcatgtcagaggc
cctccaccctctggtgtcaatatccaaaaccctgcagtctcacaatctgtaggtgttgta
agtagttcagttggtggacaaggtaagccacccgggggttggggagggactgctacatca
gaaggcaaagggaaagattgggacagcgaaggaaatgagtggcgagaatttagaacaggg
agctcgtcgggcaggtggggagatttccaaacgcagggtactccatcaactggaggaagt
ggctggggagacagtcaggaggataaacgaaaaggcagttggaaagaagtgggacggggg
gatgtgggcaattggggaacaagaggtaacagtgactggggagagaatgagcccaaatca
tgcagtgggggttggggggatgggaagagtagtggaggtactagtggggactcagaagtg
ggcacatgggttagttgggatggggaaacttctaggggggcatggggaactggaggtaca
gggtcgggtggagacatgggtggcaaatctcaccaaggctggggtgggaagatgcaccaa
tcacagatgccaaacagccaattggcctcacagaaaggcccggcacaacagcagcagcag
caacaatcacagcctcagcagtgtcagtcggtggacacaggggccatgcaagggagctgg
ggaagaccagcaggtccttcagcccagagccaaagttcagggtggacttcagggcccata
ccccaagtttccagtggctctggagacacatcagagcccagtggttgggaggagccttct
ccacagtccatcagcaggaaaatggagattgatgatggaacatctgcgtggggtgacccc
agcaaatacaacaacaaaagtgtgtgggataagaacaacgccccatctgtccaggcacaa
tcagtgtcccctcagcaaggacccccaaccctacagcagcagccacctggaagaatgcca
actggcctaggaaatagggacatgaaccttacacattcagcaaacaaggggccaggaata
gcttcttctggatggggaggtagtgactctccttccagtccatgtgtggataacggtact
gcagcctggggtaaacctactgaagcacctactagttggtgtgaccctgatgacactggc
aagtcaccaggttggggggatccctctcccaatccagtgaattctggctcaaagtctatg
caagaaggttggggtgaaggagaggtatcagtcagtgcttcacgtcactccagctgggag
gaggatgagagtggtggtgtatggaacagtgctggttctcaaggcagcagctcctcctac
aactctggaggctggggagccaagaaagccaacaagggttccttgaagggtgcaggagac
tcttggatgaacccaatgacaagacagttttcaaacatggggattctgggagaggacccc
actggtcgttctttggatctggcccctggtcctccgcaggacaaaaagatagaaggagaa
aagcgtggcatgggcttaaatgagtacaatggagagatgcgtaaaggaggacgtggaggg
ggagcaggcgtagtcttccgttcacctggttccaaagaggtgggggcatgtgaacctggg
ccttactatgacaaggtgagtggtcagttgtttagtagcggaggtgggatgggacagtcc
aggcaccaaccaggggtgcctcccatcaacccatcagtacgagcgcaagtgcctcatcag
ttcctgtcaccacaggtgccaggctctgtgctgaagcagatgcctcctcccagtggaggt
gttgggggaggcatctttcctcctcagctctccccacagcacattgccatgctcaacagc
atatacccccatcatattcagttccaactggcctgtcagctgcttcttcaacagcaaccg
cagcaacaacagcagcaactgctgcagaaccagcgcaagttccccccaaacatacgtcaa
caagcagacccccaacagcttgctagaatcatggctgttcttcagcagcagagacaacag
cagcagcatttgggaggcccaggaggcggctccaaactctctccttctcaccttggtggt
ggtggtccaaagatgccaatgtcggaccccctctcacacccaggcttggcagcatctgta
gcagacctgcatcaaaaaacacaaggaacttattctggatttgggcctggagtgagcctc
cctggtctggaattgggtcccatggttggtggcccaactgggattaaagacagtgggggc
cagcagtctcgtttcaagtggatgatggaaggtcactccccagccccctcacctcctgat
gttacactccataaaaatggtcccattgctgctcctctcaaaatgagaggcggttcccca
tattcccagtatgagatgctgggaggtgaggggttgggtgtgcctccacaagggccgtca
gatcactggcacagaagccctggaaacaagatgggtgccaagactggcacatccagctgg
cctccagagtttcaaccaggagtgccttggaaaggaattcagagtgtggaccctgaatct
gatccttacatgacccctggaagtatgctgggctcgtcgatgtcaagtctcaatgacaat
gagcaccagttgttaagagacaacacagaatcaaatccctccctcaacaccttgctgcct
tcacctggtgcctggccctacagtgcctcagagagccccctcaacaatgcacacaaccaa
gctaagtacacaacagactataaaggcagttggccacttgagcctatagggcacaacaag
ccttggaaaaccaatcgaaacaactcccatctgccacgcccacctcctggactgtcccat
cagaaacagcactccgtttctccctggacaggaggaggcccacgatttggcagaggctgg
ggtggcactggaggtggccaagaaagcaaatttgggcctggctctgcgtggagtgatgga
ggagcctctaaggggagctgctggctggtgttgagtaatcttacccctcagattgatggc
tccactttgaggactatctgtatgcagcatgggccgcttttgacctttcacctcggtttg
actcaaggtagtgctctgattcgctacagtactcgccaagaagcagccaaagcccagagc
gcacttcacatgtgtgttttaggtaacaccacaatcctggccgagtttgtgagcgaggag
gaggttgctcgctattttgcacattcccagactggagctggcgggagcagcggtggaggt
agtggagccggtggcgtagctgtctccgggccggcaggcatgacagggtcatcgggggct
ggggctgtgggtaccatcagcactgggagtggcgagcgagaacgggctggagtgggaagt
ttgactacaggaggaagcaacaatgctggtggacctgggccctctggctctacctggcag
agtttagaaggtacaggcagctctcctgaccctgcctctgcccagggagcgggcctaagt
attttcacccagtggagcagcaatggtgctggcggaagcgtgggcagcaacacagggggt
gttgatcctggcagggcggggttgtggagcggcatgactccagggtacacaagcagcagt
ctatggggctctccggccatggaagatcggcaccagatgagcagccctgcagcgctgctg
cctggagacctgctgggaggaggtgcagactctatctga
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