Carassius gibelio (silver crucian carp): 127969768
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Entry
127969768 CDS
T08819
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit-like isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127969768
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
127969768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127969768
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
127969768
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
127969768
NCBI-ProteinID:
XP_052427823
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All DBs
Position
B13:19410240..19420846
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AA seq
910 aa
AA seq
DB search
MAGALRMDETHFNMKFSNPEFMVELPYLHEPFEVKPEPYVPETVHGPYLQIIEEPKQRGF
RFRYECEGPSHGGLPGASSERNRRTYPTVKVSNYVGHARVEVQLVTHTDPPRVHAHSLVG
RHCTDNGICTIDVGPNDLTAQFSNLGILHVTKRGVHEVLTKRLKEEKRRIKEPGCKFTDA
EEQAILQEAKELGKTMDLNIVRLKFTAYLQDSNGSFTRALNPVVSNPIYDSKSPNASNLK
ISRMDKTSGSVLGGEEVFLLCDKVQKDDIDIRFYEEEDDGGWEAFGDFSPTDVHKQYAIV
FKTPPYRCTDITRPVTVFLQLKRKKGGDCSEPKQFTYIPHNQDKEEVQRKRMKVLHQSYD
HWRGGGAGAYGGPGSGTGGGGGGMGGGFPFNPPMDGSGFYIGGCGGFSGGAQMSGSTPQA
EGSPNQSTNTQTQSGSQMQQQLFQIATALQSRASLMAKCSARALLQYCSTGDVRPLLALQ
RHLCGVQDENGDTPLHLAIIHQQPVVVQQLIQALNNTPQQKFINKLNHLNQAPLHLAVIT
KQARLVEMLMKTGADPSLLDQEGRTALHLAAHTGDEAVLRVILGLLGERHAHLINSADFS
GQYPVHLAVKKDGEHCLRLLVGAGAKINMPEQKSGCTALHLAVRDNFLKLACYLITELQA
DVNACTYGGNSPLHLAASQGSPPLCSMLIAAGADKRMENDEPLFFQSSSSSDEDDESEKN
EVDRQLPDLMVQQVHCMSISSERGAFNPRKRPAAGHTPFDLAKCQKVRDLLDGRKGPKSS
SLAPKRTKITTEEVNQGLDSEVLTKLCSILIEDHVPWRELAEKLGMLTLTHLYQESSSPC
QKLLENYQLSGGPVDGLVEALQSLGVSEGVRLLRDSQPREDKQSTDSKEDSGFGSQSIEE
EMGNPAVANH
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggctggagcactaaggatggatgaaacacattttaacatgaagtttagcaatcctgag
ttcatggtggagcttccatatctgcacgaaccttttgaggtcaagcctgaaccctatgtg
ccagagacagttcatgggccttatctacagattattgaggagccaaagcagagaggattc
agatttcgttatgaatgtgagggcccatcccatggtggtctgcctggggcctccagtgag
aggaacagaaggacgtatcccacagtcaaggtgtcaaactacgtgggtcacgctcgcgta
gaggttcagcttgtgacgcacacagaccccccacgtgtccacgcacacagccttgtgggt
cgccactgtactgacaacggaatatgcaccattgatgtcgggcctaatgatctcacagca
caattcagtaatttaggcatcctccatgtcactaagagaggagtgcatgaagtattaacg
aaaagactgaaagaagagaagaggaggataaaagagcctggatgtaaatttacagatgca
gaggaacaggctattttgcaagaggccaaagaactgggcaaaaccatggacctaaacatt
gtgagattaaagtttactgcgtatttgcaggacagcaatgggagtttcacaagagccttg
aatccagttgtctccaaccctatctatgatagcaaatcaccaaatgcttcaaatctgaag
atctcccgcatggacaaaacctctggatcagttctgggaggagaagaggtctttctgctc
tgtgataaagttcaaaaagatgatattgacattcgtttttatgaggaggaagatgatgga
ggatgggaggcatttggagacttctcccctactgatgtccacaaacagtatgcgatcgtg
tttaagaccccaccataccgctgcacagatatcacacgtcctgtcacagtcttcctgcag
ctcaagaggaagaagggaggcgactgcagcgaacccaaacagttcacctatattcctcac
aatcaagacaaagaagaggttcagaggaagaggatgaaggtacttcatcagtcctacgat
cactggcggggaggaggagcaggggcctatgggggtcctggatctggaacaggaggagga
ggaggaggaatgggaggaggttttccatttaatcctccgatggatggttcagggttttac
attggtggatgcggtggatttagcggcggggcacagatgtcaggctccacaccacaggct
gaaggatctccgaatcagtcgacaaacacacaaactcagtctggctctcaaatgcaacag
cagctctttcagattgccacagctctgcagagtcgtgcctctttgatggcaaagtgctct
gctcgtgctttgttacagtactgcagcactggggatgtgcgccccctgctggctctgcaa
agacatctgtgtggagtgcaggacgagaacggagacactcctttgcacttggccattatc
catcagcaacctgttgtggtacaacagctcattcaggccctgaacaacactccacagcag
aagttcatcaacaagctcaaccacctcaatcaagctccattgcatctggctgtgatcaca
aagcaggccaggttagttgagatgctgatgaaaacgggtgcagacccgagcctgctggac
caggagggccggacagcgcttcacttggccgctcacaccggtgacgaggccgtgctacga
gtgatcctgggtctgctgggagagcgccatgcccatttaataaactctgctgacttctca
ggtcaatatccagtccatctcgcagtaaagaaagacggagagcactgtcttcgattgttg
gtgggggcaggagcaaagattaacatgcccgagcagaaaagcggctgcacagcactacac
ctggcagtgagggacaactttttaaaactggcctgttatctcattaccgagctgcaggct
gacgtgaatgcgtgtacctacgggggcaacagtcctcttcaccttgctgccagtcagggc
tctccacctctctgctccatgctgatagctgcaggtgctgataaacgcatggagaacgac
gagcctctttttttccagagctcgtcctcctcagatgaagatgacgagagcgagaagaat
gaagtcgacaggcagcttccagatctcatggttcagcaagttcactgcatgtcgatatca
tctgaaagaggagcatttaacccacgcaagagacctgctgcgggacacacaccatttgac
ctggccaaatgccaaaaggttagagatcttttagatggcaggaaaggacccaagtccagt
tctctcgcccccaagaggaccaaaataaccaccgaggaagtgaaccaaggtttggacagt
gaggtgctcaccaaactgtgtagtattctcattgaagaccatgtaccctggagagagctg
gcggaaaaactgggcatgctcacactcactcacctgtaccaggagagtagctcaccctgc
cagaagcttctcgagaactaccagttgagtggtggtcctgtggacggcctggtggaggcg
ctgcagtctctgggtgtgagtgaaggagtgagactgctgagagacagccaacccagagag
gacaagcagagcacagattctaaagaggacagcggctttgggagtcagtccattgaagag
gagatgggaaatcctgcagtggccaatcactga
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