Carassius gibelio (silver crucian carp): 127969830
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Entry
127969830 CDS
T08819
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127969830
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
127969830
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
I-set
Ig_3
LRR_5
ig
Ig_2
LRR_9
V-set
LRRNT
Ig_C17orf99
C2-set_2
Ig_6
Herpes_gE
Motif
Other DBs
NCBI-GeneID:
127969830
NCBI-ProteinID:
XP_052427915
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All DBs
Position
B13:complement(16440537..16454747)
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AA seq
607 aa
AA seq
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MLFSSFSCALGLSLLSLLLLQCPAHACPARCECSVPTRSVSCHRRRLVQVPEGIPIETRA
LDLSKNRLRTVTPQNFSSLLLLEELDLSNNLLSSVEPGSFRAQPRLRSLRLRSNQLTLLQ
RGALAGLSELTLLDVSQNRLVILLDYGFEEQRRLRVLELSDNELVFIAPRAFSGLASLRS
LTLQRCNLSTVPTHALAHLHGLTSLRLRDLGIAELQAHAFKGLPRLKHLEVDRWPLLEGF
PTSTLQGLNLSTLSITHTNLTSVPVVTHLLYLTHLNLSYSRIRVLPAGWLRGMDRLEVVR
VRQSNLLSVETQAFQGASSLRILDLCYNRLSTLERSVFPASEALQSLLIGQNPLVCDCRL
RWLLERTPLLLYGDVQPECSAPAPLAGKPLRNLVEPQISRYVICTKPRVVSMAIYPAQAE
EGQRAWLYCSADGAPPPSVSWLTPHRRHITTKSTGRMVVHTNGSLEFRMAEPQDSGMYVC
VASNPAGNATLSITVAVKSSGIRDRALYANRSFLFDSDYNSSLINGTEEYTIRVVLDFTT
ILVSTAMGCLSFLGVVLFCFLLLFAWSRGKGKHRGSVDIQYVPRKRKGANSELTETSGPR
RVNMKMI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctcttcattctcttgtgctctggggctctccctcctgtcactcctcctgctt
cagtgccccgcccatgcctgccctgcccgctgtgagtgctctgtgcccacacgttctgtg
tcatgccatcgcaggcggttagtgcaggtgcctgagggaatccctatagagacaagggca
ttggacctcagtaaaaaccggctgcgcactgtgacaccacagaacttttcctcgctgctg
ttgctggaggagctggacctcagcaacaacctgttgtcatctgtggaacctggcagcttc
cgagctcagccgcggctgcgctcgctccgactgcgaagcaatcaactgactttgttgcaa
cgcggagcgctggctggcctcagcgagctaaccctgctggatgtcagtcaaaaccgtctt
gttattctgctggactacggttttgaggagcagcggaggctcagggtactagagctgagt
gataatgagctagtgttcatcgccccacgggccttcagtggcctggcatccctgcgctct
ctaacgctgcagcgatgcaacctgagcacagtacccacacatgctctcgcacatctgcac
ggtctaaccagcctgcgattgcgggacttgggcattgcagagcttcaggcacacgcattt
aagggtctaccacgattgaaacaccttgaagtggaccgctggcctttgttagaagggttt
ccgacctccactttgcaggggctgaatctcagcacactctccattacccacaccaatttg
acgtccgtgccagtggtgacacatctgttgtatctaacgcatctcaacctgtcttacagc
cgcatacgtgtcctgccagcaggatggttgaggggaatggaccggctggaagttgtacgt
gtgcgacagtctaacctgctcagtgtggaaactcaagcctttcaaggagcctcctcgctg
cgcattcttgacctttgttacaaccgtctctccacgctcgagaggagtgtttttcctgct
tctgaggccctgcagagtcttctgattggccagaacccattagtgtgcgactgtcgtctt
cgctggctactggagaggactccacttttgctgtatggtgatgttcaacctgaatgtagt
gcccctgctcccttggctgggaagcctcttaggaacctggtggaacctcagatctctcgc
tacgttatctgcaccaagcccagggttgtctcaatggcaatttacccagcacaggcagaa
gaaggacagagagcttggttatactgcagtgcggacggggctccaccaccttctgtctca
tggctgacaccgcataggcggcacattaccacaaaaagtacgggacgaatggttgtccat
accaatggctcgttggagttccgcatggcagagcctcaggatagcggcatgtacgtatgt
gtggcatcgaacccagcagggaatgccactttgtccatcactgttgctgttaaaagctcg
ggaatcagggatagagccctttacgccaaccgcagctttctgtttgactccgactacaac
agttccctgattaatggcacagaagagtacaccatcagggtggtactggacttcaccact
atcctggtctccacagcaatgggctgcctcagcttcctgggtgtcgtcttgttctgtttc
ttgttgttgtttgcatggagccgtggcaaagggaagcatagaggtagcgtggacattcag
tacgtcccacgaaaacggaaaggcgcaaactcagaacttacggaaacaagtgggcccaga
cgtgtcaacatgaagatgatctaa
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