Carassius gibelio (silver crucian carp): 127969875
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Entry
127969875 CDS
T08819
Name
(RefSeq) homeobox protein SIX2
KO
K19472
homeobox protein SIX2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127969875
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
127969875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
Phage_mat-A
HTH_72
Motif
Other DBs
NCBI-GeneID:
127969875
NCBI-ProteinID:
XP_052427962
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All DBs
Position
B13:complement(17379051..17381859)
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AA seq
286 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENTNSHNPLTSSMNGNKTILGSSDDDKTPSGTPDHTSSSPALLLTSNPGL
QSLHGLAPPPGPSAIPVPSADSVHHHHSLHDTILNPMSSNLVDLGS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgcttcccacattcggctttacgcaagagcaagtggcgtgcgtctgcgaggtc
cttcagcagggtggaaacattgaacgtctcgggcgcttcttgtggtctctgccggcttgc
gaacatctccacaagaacgagagtgtgctcaaagcaaaagcagtggtcgcttttcatagg
ggaaatttcagagagctttataagattctggagagccaccagttctctccgcacaaccat
ccgaagctgcagcagctgtggctcaaagcgcattatgtcgaggctgagaagctccggggc
cgccctcttggggctgttgggaagtaccgcgtccgaagaaagtttccgctaccccgctcc
atttgggacggcgaggagacaagttactgctttaaagaaaagagcaggagcgtgctgcgg
gaatggtacacccataacccgtacccttccccgcgggagaagagggaactagcagaggca
acggggctaacgacaacacaagtcagtaactggtttaaaaacagacgtcaacgcgaccga
gcagcggaggccaaggaaagggagaacaatgagaacacaaacagtcacaacccgttaacg
tcttccatgaatggaaataagactattttaggaagctcggacgacgacaaaacgccgtct
ggtaccccagatcacacctcgtcaagcccggccttgctcctcacgtcaaaccccgggctt
cagtccctccacggcctcgcacctccacccggtcccagcgccatcccagtgcctagtgca
gattccgtgcatcaccaccactcattacacgacactatactgaaccctatgtcatcaaac
ttggtcgacctcggctcttaa
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