Carassius gibelio (silver crucian carp): 127969902
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Entry
127969902 CDS
T08819
Name
(RefSeq) DNA mismatch repair protein Mlh1
KO
K08734
DNA mismatch repair protein MLH1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03430
Mismatch repair
cgib03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127969902
03460 Fanconi anemia pathway
127969902
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127969902
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
127969902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
127969902
NCBI-ProteinID:
XP_052428010
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Position
B13:complement(6030059..6037173)
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AA seq
720 aa
AA seq
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MAGVIRRLDETVVNRIAAGEIIQRPANAIKEMMENCLDAKATNIQITVKEGGLKLILIQD
NGTGIRKDDMEIVCERFTTSKLQSFEDLSSIATYGFRGEALASVSHVAHVTITTKTADAK
CAYRASYCDGKLKAPPKPCAGNQGTLISVEDLFYNVSTRRKALKSPSEEYSRIIEVVSRY
AIHNSGKSFSVKKQGEMVADVKTLQNASVLDNIRAVFGVAVSRELIEVECEDQKLAFKMK
GYISNANYSVKKCILILFINHRLVESSGLKKAIETVYTAYLPKNTHPFLYLSLEIAPQNI
DVNVHPTKHEVHFLHEDSIIESVQKHIESKLLGSNSSRTYFTQTLLPGLSVSTSASKASA
DSQERVYAHQMVRTDSKVQKLDAFLQPSTSSSAAQSRSDKASSSSSAAQGSAEPDDSELL
TALDVLEPCDTEDPQTDSQPPPDEAPPRKRSHVEEVKEDLTATSVPRRRVIKLTSIKELR
EDIEQHTHKGLHDLLQNHSFVGSVNPQWTLVQHQTKLYLLNTTKLSQELFYQILIYDFGN
FGVLRLSNPAPLYDLAMLALDSEESGWTEEDGPKEGLAQYIVDFLKQKAVMLEEYFSLEI
DEEGNLTGLPMLLDDYTPVMEGLPTFILRLATEVNWDQEKECFHDFSIECSHFYSIRKQY
TLEPDAEEPQGAEMSWQWKVEHVIFKALRTLFSPPKHFSEDGSVLQIASLPELYKVFERC
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagtcatccgcagactcgatgagactgtagtgaaccgcatcgctgcaggagag
atcatccagcggcctgccaatgccatcaaagagatgatggagaactgtttggatgcaaag
gccacaaatatccagataacagtgaaagagggcggactgaagctcatcctcattcaggac
aacggcactggcatcaggaaagatgatatggaaatagtctgtgagcgttttacaaccagc
aagctccagtcttttgaggacttgtcatcaatcgcaacatatggcttcagaggggaggct
ctcgccagtgtaagtcatgtagcccatgttacaatcaccactaaaacagctgatgcaaaa
tgtgcctacagggccagttactgtgatgggaagctgaaagctccacctaaaccctgcgct
ggaaaccaagggacattgatttctgtagaagatctgttctataatgtgtctactcgacgg
aaagccctgaagagccccagtgaggaatattctagaatcattgaggttgtgagcagatac
gccattcacaactctgggaaaagtttttctgtcaagaagcaaggtgagatggttgcagat
gtgaagacccttcagaacgcctctgtgctggacaacattcgtgctgtgttcggtgtagct
gttagcagggagctgattgaagttgagtgtgaagatcagaaactcgcttttaaaatgaag
ggctacatctccaatgcaaactactccgtcaagaaatgcatcctcatcctttttatcaac
catcgcttggtggagtctagtggcctgaaaaaggcaattgagactgtctacactgcttat
cttcccaaaaacactcatccttttctttatcttagtttagagattgctcctcagaacatt
gacgtgaacgttcaccccaccaagcacgaggtgcacttcctgcatgaggacagcattatc
gagagcgttcagaaacacatcgagagtaaactgctcggctcgaactcttcacgcacatac
ttcacacagactttgcttccaggactttcggtgtccaccagtgcttcaaaagcctcagca
gattcccaggagcgagtatacgcccatcagatggtccgcaccgacagcaaagtccaaaag
ctggatgcatttctccagccatcgacctcatcgtctgctgctcagagcaggtcagataaa
gcctccagctcctcctctgctgctcagggttcagccgaaccagacgactccgagctgctg
actgctctggatgttcttgagccgtgtgacacagaggatccacagacagacagtcaacct
cctcctgatgaagcaccaccaaggaaaagatctcatgttgaggaggtgaaggaggattta
acggccacctctgtgcccaggagacgcgtcattaaactgaccagcataaaggagctccgg
gaagatattgagcagcatactcacaaaggtttgcacgatctgctccagaatcactcattc
gtaggttcagtcaatcctcagtggactctagtacagcaccagaccaaactctacctgctc
aatacaaccaaactcagccaggagctgttttatcaaattttgatctacgattttggtaac
ttcggggttcttcgattgtcgaatccagctccgctctatgatttggccatgttggctctg
gattcggaggagagtggatggaccgaggaggacggtccaaaagaaggactggctcagtat
atcgtggattttctgaagcagaaagcagtaatgctggaagagtacttttctcttgaaata
gatgaagaagggaacctgactggtctgccaatgctgcttgatgattacactcccgttatg
gagggacttcccacgttcattctgcgtttagccacagaggtgaactgggaccaagagaag
gagtgttttcatgacttcagcatagaatgcagtcacttctattccataaggaaacaatac
acactggagccggatgcagaagagccacagggtgcagagatgagctggcagtggaaggta
gagcatgtgatttttaaagcactccgaactctcttcagtcctccaaaacacttcagtgaa
gacggcagcgttctgcagatagccagcctgcctgaactctacaaagtgtttgaaagatgc
taa
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