Carassius gibelio (silver crucian carp): 127970008
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Entry
127970008 CDS
T08819
Name
(RefSeq) integrin alpha-9-like
KO
K06585
integrin alpha 9
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
cgib04514
Cell adhesion molecules
cgib04810
Regulation of actin cytoskeleton
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127970008
04514 Cell adhesion molecules
127970008
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127970008
09142 Cell motility
04820 Cytoskeleton in muscle cells
127970008
04810 Regulation of actin cytoskeleton
127970008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127970008
Cell adhesion molecules [BR:
cgib04515
]
Integrins
Integrin alpha subunits
127970008
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Ortholog
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GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
127970008
NCBI-ProteinID:
XP_052428151
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All DBs
Position
B13:3689503..3773184
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AA seq
1032 aa
AA seq
DB search
MRDRMTGLSTRNRRPLDVFVCLCLVSLAYSFNIDLQHTLVFRGPNTTFFGYSVLEHVHDN
TRWIVVGAPRANSSFSSSVQSPGAIYKCRIRNNPEQRCTEMDLGRGNKQRESCGKTCQGD
RNDEWMGVSLARQDKPNGKILACAHRWKNVYYESEHILPHGYCSVIPATLQGKSQPLIPC
YEDHKKTYGEEHGSCQAGIAGVFTEELVIMGAPGSYYWTGTVKVFNMTSNTHYNLNQDNL
SPHRYSYLGYAVTAGHFSSPNTIDVAAGAPQDSGGGKVYVFRIEGTSLVKTFEASGKIMG
SYFGSSLCAVDLNADGLSDLLVGAPMHSEIRDEGQVSVYLSSGNGVMEEVAILNGDNAYN
AHFGECITSLGDIDDDGYQDVAIGAPKEDDYGGAVYIYHGDATGIVKKYSMRLSGRSINP
TLQMFGQSISGNVDMDGNGYPDVTIGAFMADSVVLLRSRPVISVDVSIFLPVSINITVPQ
CHEGPQHLNCFNVSICMSFRGKQVPGHIELLYNLTADSDKRHRGLPVRVYFGNGGEQTGA
VSQRFSLEINRPQCHHYTSFVRKEVKDVFAAIVFEAAYSLGKHIVDGHQDRDLPSLSPVL
RWKKGEKIAAKNETWFEKNCLSEDCAADLRLRGKLLLSGRYISSRLALGGVKNVSLNVTI
SNAGDDAYDTNIYFNFSREVHYINFLQREEKGISCMLVDLDFLKCSVGFPFMRAQTKYHL
SVLFDTSRLSGENETLLFLVHAKSANPEHDSTLHDNTLELSIPLVHEVDTTITGVVTPTS
FVYGNSVDRSRFLQLDDMECSFQPLNFTFQVINNGPSRLPGSTVDIRIPNRMAGNGADMF
HIIDTQVSEGRGNCTWHRNPKPCTIPHDKKSIFHTIFAFFTKSGRKVLDCDRPGRACLTI
SCSLSSQAKEEATSIDVQMLLNTEILQKDSFSVIQFVTRGHVQLDDRAVEVSTGLPEEIS
LVFEALHSQEPRGYVVGWIIAISLLVGILLFLLLAVLLWKMGFFRRHYREIIEAEKNRKD
SDESWDWVQKSQ
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgacagaatgacgggactttctacgcggaacagacgccctttggatgtttttgtg
tgtttgtgtttggtttctttggcttattccttcaacattgacttgcaacacaccttggtg
ttccgaggaccaaatacgacgttttttggatattcagtcttggagcacgtacatgacaac
acacgctggattgtggtcggggctcccagagccaactcatcattcagcagttcagttcag
tcgcccggagccatatacaagtgtcggatccgcaacaacccagagcagcgctgcactgag
atggacctcggcagaggaaataagcagagggagtcctgtgggaagacgtgtcaaggcgac
agaaatgacgagtggatgggggtcagtctggctcgacaggacaaacccaatggcaaaatt
ctggcctgtgctcaccgctggaagaatgtatactatgaatcggagcatatcctccctcat
ggatactgctccgtcatcccagccactctccagggcaagtcacagcctctcattccctgt
tatgaagaccataaaaagacctatggggaagaacacggctcgtgccaagccgggatcgca
ggcgttttcactgaggagctggttatcatgggtgcacctggatcttactactggaccgga
acggtcaaagtgtttaacatgacatccaatactcactacaacctaaatcaagacaacctg
agtcctcacagatacagttacctcgggtatgctgtgacagctggtcacttctcctcaccg
aataccatagacgtggcggctggtgctcctcaagacagtggtggtggaaaagtttacgtc
ttcagaatcgaagggacgtctcttgtgaagacctttgaagcctcagggaaaataatgggc
tcttactttggctcctcattgtgtgcagttgacctaaacgcggacggactgtcggacttg
ctggtgggagcacccatgcacagcgagatccgggatgaaggccaggtttctgtttacctc
agcagtggtaacggagtgatggaggaagttgcaatattaaatggtgacaatgcatacaat
gctcattttggagagtgtatcacttctcttggggacattgatgacgatggctaccaagat
gtagctattggagcccccaaagaggatgactatggaggagcggtctacatctaccacggt
gatgctacaggaatagttaagaaatactcaatgagactgtctgggcgaagcatcaacccc
accctccaaatgttcggccagtcgatttccggcaatgtggacatggatggaaacggatat
ccagatgtgacgataggggcgttcatggctgacagtgtggttttgttaagatccaggccg
gtgatctctgtagacgtctccatcttcctccccgtctcgataaacatcacagtaccgcag
tgtcacgagggccctcagcatctcaactgcttcaacgtcagcatctgcatgagctttcga
ggaaaacaagtacctggccacatagagctgctgtacaatctaacggcagattcagataag
agacacagaggtctgccggtgcgggtgtattttggaaatggtggagagcagacaggtgct
gtaagtcagcgtttcagcctggagatcaaccgaccgcagtgccatcactacacgtccttc
gtgaggaaagaagtgaaggacgtgtttgctgccatcgtgtttgaagcagcctacagctta
ggaaaacacattgtggatggacaccaggaccgtgatcttccctcgctctctcctgttcta
cgctggaaaaaaggagagaagatcgctgcaaagaacgagacgtggtttgagaagaactgt
ctgtcagaagactgcgccgctgacctgaggcttcgtgggaaactgctgctttctgggcgt
tacatcagttctcgtcttgctcttggtggagtgaaaaacgtgtcattaaatgtaaccatc
tctaatgctggagatgatgcctacgacaccaacatctacttcaacttctccagagaggtt
cactacattaacttcttacaaagagaagagaagggcatttcctgtatgctggtagacctg
gacttcctcaagtgcagtgttggatttcctttcatgagagcgcaaaccaagtaccatcta
tcagtgcttttcgacacgagtcgtctgtccggtgaaaatgagacgctgctatttttagtt
catgctaaaagtgccaatccagaacatgatagcactcttcatgataacacattggagctg
tccatacctctggttcatgaggtggacacaacaatcacaggtgtggtcacacctacatct
tttgtgtatggaaactcagtggaccgatcgcgcttccttcagctggacgacatggagtgc
agctttcagccgctcaacttcacctttcaggtgataaacaatgggccgagcagacttcca
ggctccaccgtggacatcaggatacccaaccgcatggctggtaacggagcagatatgttc
catatcattgacacacaagtatctgaaggacgagggaactgcacgtggcacaggaacccc
aaaccctgcacaatccctcacgacaagaagagcatcttccacaccatttttgcattcttc
accaaatcaggcagaaaagttctggactgtgaccggcctggcagagcgtgtcttactatt
tcctgcagtctgagctctcaggccaaagaggaagctacgagtatagatgtgcaaatgcta
ctgaacactgaaatactacagaaggacagcttctctgtgatccagtttgtgacacgaggt
cacgtccagctggacgacagggccgtggaggtctcgaccggactcccagaggagatttct
ctggtgtttgaggctcttcacagtcaggagcccaggggatatgtggtgggatggatcatc
gccatcagcctcctcgtgggaatcctcctcttcctgctgctggccgtgctgctctggaag
atgggattcttcaggaggcattacagagagatcatagaggccgaaaagaacaggaaggac
agcgatgaaagctgggattgggtccagaagagccaatga
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integrated database retrieval system