Carassius gibelio (silver crucian carp): 127970017
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Entry
127970017 CDS
T08819
Name
(RefSeq) poly(A) polymerase gamma-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127970017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127970017
Enzymes [BR:
cgib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
127970017
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
127970017
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
DUF4269
Motif
Other DBs
NCBI-GeneID:
127970017
NCBI-ProteinID:
XP_052428162
LinkDB
All DBs
Position
B13
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AA seq
751 aa
AA seq
DB search
MHAVADKRPWTGNSTLGGQQPQKHYGITSSISLAFPREIDHIYTQKLTEAMKPFGVFESE
DELNHRLAVLGKLNSFVKEWIAEISESKNLPLSAVVNVGGKIFTFGSYRLGVHTKGADID
ALCVAPRHVERTDFFSSFFEKLKRLDEIKDLRAVEDAFVPVIKFKFDGIEIDLLFARLAL
QSIPDNLDLRGDSLLRNLDIRCIRSLNGCRVTDEILYLVPNKENFRLTLRAIKLWAKRRG
IYSNMLGFLGGVSWAMLVARTCQLYPNAVAATLVHKFFLVFSKWEWPNPVLLKQPEDSNL
NLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSTSTRTIMSEEFKNGLTVTDEILQGK
ADWSKLFEPPNFFQKYKHYIVLTASASTEENHLEWIGLVESKIRVLVGNLERNEYITLAH
VNPQSFPGSKENHNENEFVSMWFIGISFKKLDNSDCVNIDLTYDIQSFTDTVYRQASNIN
MLKDGMTIEATHVKKKQLHHYLPPELVQRKKKSLGDINRSSNGGGSKRCSLDGSQLDSSR
DTDIGTPFSSPTPVSKPCQPASTPEDSSISPPKHPVLAFMDSPPASEVSPPKPEQGMSIP
VIGSKPIATPVAKPPAPPAGNTIPTVVGRSVIPRITSTSPGLTELPNSVNGAPKRPHSPS
LEDPPKRHKDTEVFSDDSAFKEPYPPNSNGLNSEEESTVEGLSTTKPMPIPTIDTSRSQR
LPSKELPDASSPIPTSNLRVIKNSIRLTLNR
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgcatgctgtagcggataagcggccttggactggtaacagtacgcttggcgggcagcag
cctcagaaacattatggcatcacttcttcaatcagcctggcctttcccagagagatagac
catatctacactcagaagcttactgaggctatgaaaccatttggagtgtttgagagtgaa
gatgaactcaatcacagacttgcagttcttggaaagctgaattcctttgtgaaggagtgg
attgcagaaatcagtgaatcaaagaatcttccactgtcagcagtagtgaatgttggtggc
aaaatctttacttttgggtcatataggttgggagtgcacacaaaaggtgctgatatagat
gctttgtgtgttgccccacgtcacgtcgaaagaactgactttttttcatccttctttgaa
aaactaaaacggcttgatgagattaaggatctacgagctgtggaagatgcatttgtaccg
gtcatcaaattcaagtttgatggaattgagattgatctgctgtttgccaggctcgcttta
cagtcaattcctgacaacctggacctgagaggagactctctcctcagaaacttggacatc
agatgcattcgcagtttaaacggttgccgtgttacagatgagatcctatatctggtgcct
aataaagagaacttcaggttaacattgagagcgattaaactgtgggccaaacgacgtgga
atctattccaacatgctaggcttccttggtggagtttcctgggctatgctcgtggccaga
acttgtcagctctatccaaatgctgttgccgccacacttgtgcacaagttctttctggtc
ttctctaaatgggaatggccaaaccctgtgcttttaaaacaacctgaagacagcaatttg
aatcttccagtctgggatccacgggtgaatccatcagacaggtatcatctgatgccaatc
atcactcctgcatatccacaacagaactccacctacaacgtgtccacttccacacgcacc
atcatgagtgaagagttcaaaaatggtctcactgttacagatgaaattcttcagggtaaa
gccgattggtccaagttgtttgaacctcctaactttttccagaagtataagcattacatt
gtcctcactgccagtgcatccactgaggaaaaccatctggagtggattggactggtagaa
tcaaagataagagtgttggttggaaatttggagcgcaatgagtacatcacccttgcccat
gtcaacccacagtcttttcctgggtcaaaagagaatcacaacgaaaatgaatttgtttcc
atgtggttcattggaatcagtttcaaaaaactggacaactctgactgtgtgaatattgac
ttgacctacgacatccagtccttcacagatactgtttataggcaggccagcaatatcaac
atgctaaaggatggcatgactattgaggccacacatgtgaagaaaaaacagttgcatcat
tacctgcctcctgaacttgtgcagaggaagaagaagagtttgggagatataaatcggagc
tcaaatggtggggggtcaaagcgctgctctctggatggcagtcagctggacagctccagg
gacacagacatcggcactccattcagttctcctacaccggtcagcaaaccatgccagcca
gcctccacacctgaagacagtagtataagcccacccaagcatccagtacttgcattcatg
gacagcccaccagcatcagaagtttctcctccaaaaccagaacagggaatgtccattcca
gtcatcggatccaagcccattgccactccagttgccaagcccccggcacctcccgctggc
aacactattcctacagtggtgggccgcagtgtgataccccggattacctctacctcccct
ggcctaactgaactgcccaacagtgtcaatggagcgccaaagagacctcactctccatct
ctggaagatccacctaagaggcacaaagatacagaggtgttttcagatgactctgctttt
aaagagccgtaccctccaaatagtaatggcttgaacagtgaagaggagtcaacagtggag
ggtctttcaacaaccaaacctatgccaataccaacaattgatacatcaagatcacagaga
ctacccagtaaagagcttccggatgcatcttccccaattcccacaagcaacctccgtgtg
attaaaaattcaatcaggctcactcttaaccgataa
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