Carassius gibelio (silver crucian carp): 127970127
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Entry
127970127 CDS
T08819
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cgib04054
]
127970127
Pattern recognition receptors [BR:
cgib04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127970127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
NOD2_WH
LRR_6
Motif
Other DBs
NCBI-GeneID:
127970127
NCBI-ProteinID:
XP_052428367
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All DBs
Position
B13:complement(25054370..25072225)
Genome browser
AA seq
1025 aa
AA seq
DB search
METPKKTGCKMSFYQERKEEDVDHSQSQRAESPEPSCVSMMSDTSMTEHPKFSDESVPFH
PRKEKKRAASPEPSCVSMMSDTSMTERPKFSGGLVPFNPRKEKKRAASPEPSCVSMMSDT
SMTEHPKFSDGSVPFNPSNNQPDHPPQPLNDELQTVKEQHKTSMRNKYERLFEGIKLQEN
ETLLNSIYTQLYIIEGEREGVNEEHEVLQMEKTARTQHSQDTPIYCNDIFKGSAEAGCEE
KEQIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDFMFVLPFRELNLIRDHQYSLHR
LLLDFHPELQDLDSQIYEECKVVFIFDGLDESRITLMFSDAQKVCDVTETSSVAVLMSKL
MKGELLPSALIWITSRPAAANQIPSEYIHRLTEIQGFTDPQKEEYFRKRISDEHQASRII
SHIRRARSLHIMCHIPVFCWISSTVLQKLLEEDLRAEIPQTLTEMYIHFLLIQINMRKQK
YEERDPEKLLPSNREVIVKLAEVAFKQLMKGNVMFYEEDLIESSIDVTDASVYSGICSEI
FKEESVIHQRKVYSFIHLSIQEFLAAFYLFYCHLTKNMEPLQDINYERYSSQENSLYDLL
RSAVDEALKRENGRLDLFLRFLLGVSLESNQRLLQDLLTHTENSSENIKQITQYIKDKIK
KKDYIMKLSTERSINLFLSLLEVKDQTLSREIQEFVKSDNHSENELTPANCSTIAYMLQM
SEEPLDELDLMKYNTSDEGRGRLVPAVSNCKKALLAGCCPFDQHCETVCSALQSPNSHLN
ELDLCINGLKDSGVKLLSYGLKSQNCQLEILRLPGCNLTAQSCESLSSVLQSSTSRLREL
DLSNNDLHNSGLKLLSDGLKSPNCQLKILKCSICSLSAQSCESLSSVLPSSTSCLRELDL
SNNDLHNSGVKLLSDGLKSPNCQLKILRLSGCMVTEKGCRYVSSALSSNPSHLEELDLSY
NHPGDSGVKLLSKNLEDPKCTLDKLKYANKNCLYSSDSLSLCSSLVIFTTTLKLEMFQTH
APASL
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaccgaagaagactggttgtaaaatgagtttctatcaggagagaaaggaggag
gatgttgatcactctcagtcccagagagcagaatctcctgagccaagctgtgtgtctatg
atgagtgatacatccatgacagaacaccctaaattcagtgatgaatcagtgccctttcac
cccagaaaagagaaaaagagggcagcatctcctgagccaagctgtgtgtctatgatgagt
gatacatccatgacagaacgccctaaattcagtggaggattagtgccctttaaccccaga
aaagagaaaaagagggcagcatctcctgagccaagctgtgtgtctatgatgagtgataca
tccatgacagaacaccctaaattcagtgatggatcagtgccctttaaccccagcaataat
cagcctgatcatcctcctcaaccactgaatgatgaactacaaacagtcaaagagcagcac
aaaaccagcatgaggaacaagtatgagagattatttgagggaatcaaactccaggaaaat
gaaaccctcctgaacagcatctacacacagctctacatcatagagggagagagagaagga
gtgaatgaagaacatgaggttttacagatggagaaaacagccagaacacaacactcacaa
gacactccaatctactgcaatgacatctttaaaggctccgctgaagcaggatgtgaggag
aaagagcagatcaagactgttcttactaaaggcatcgctggaatcggaaaaaccgtctct
gtgcagaagttcattctggactgggccgagggaaaagccaatcaggatgtagatttcatg
tttgtgctaccatttcgagagctgaacttgatccgagatcatcagtacagtcttcacaga
cttctgctggactttcatcctgaacttcaagatctggactcacagatttatgaggagtgt
aaagttgtgttcatctttgatggtctggatgaaagcagaatcacactgatgttttcagac
gctcagaaagtttgtgatgtgactgagacttcatcagtggctgtgttgatgtcaaagctg
atgaaaggagagctgcttccctctgctctcatctggatcacctccagaccagcagcagcc
aatcagatcccctccgaatacatccaccgtctgacagaaattcagggattcactgatcct
cagaaggaggaatatttcaggaagagaatcagtgatgagcatcaagccagcagaatcatc
tcacacatcagaagagcaagaagcctccacatcatgtgccacatccccgtcttctgctgg
atctcatccactgtgcttcagaagctcctggaagaagatctgagagcagaaatccctcaa
actctgactgaaatgtacatccacttcctgctgattcagatcaacatgaggaagcagaag
tatgaagagagagatccagagaaactcctgccgtccaacagagaagtgattgtgaaactt
gctgaagtggctttcaaacagctgatgaagggcaatgtgatgttctatgaggaggacctg
attgagagcagcatagacgtcactgacgcctcagtgtattctgggatttgcagtgagatc
tttaaggaggaatctgtgattcatcagaggaaagtctacagcttcattcacctgagcatt
caggaatttcttgctgctttttatctgttttactgccatctgacaaagaacatggagcca
ttgcaggacattaattatgaaagatacagttctcaggaaaactctttgtatgatctacta
agatcagcagtagatgaagctcttaagagggaaaatggacgtctggatctgttcctgcgg
ttcctgctgggcgtctcattggagtccaatcagagactcttacaggatctactgacacac
acagagaacagctcagaaaacatcaaacaaatcacacaatacattaaagacaagatcaag
aaaaaagactatatcatgaaactctccactgaaagatccatcaatctgttcctctctctg
ttggaggtaaaagatcagactctgtccagagagattcaggagtttgtgaaatccgataat
cactcagagaatgaactcacacctgctaactgctcaacaatcgcctacatgcttcagatg
tcagaggagccactggatgagctggacctcatgaaatacaacacatcagatgagggtaga
ggaagactggtaccagctgtgagcaactgcaaaaaagctttacttgctggatgttgccct
tttgatcagcactgtgaaactgtatgttcagctctccaatcaccaaactctcatctgaat
gagctggacctgtgtataaatggcctaaaggattcaggagtgaagctgctttcttatgga
ctgaagagtcaaaattgtcagctggagatactaaggctacctgggtgtaatctcacggct
cagtcttgtgagagtttgtcatcagtattacaatcctcaacctcccgtctgagagagctg
gacctgagtaacaatgacctgcacaattcaggattgaagcttctttctgatgggctgaag
agcccaaactgtcagctgaagatactaaaatgttccatatgtagtctcagtgctcagtct
tgtgagagtttgtcatcagttttaccgtcctctacttcctgtctgagagagctggatctg
agtaacaatgacctgcacaattcaggagtgaagcttctttctgatggactgaagagtcca
aactgtcagctgaagatactgagattgtcaggttgtatggtgacagaaaagggctgtcgt
tatgtatcttcagctctgagttcaaacccttcacatctagaggagctggatctgagctac
aatcacccaggagactcaggagtcaagctgctctctaaaaacctggaggatccaaagtgc
acactggacaaactcaagtatgccaacaagaattgtttatactcttcagactctctctct
ctctgttcttctttggtcatctttacgaccacattaaaattggagatgtttcagacacat
gctccagcttcactttag
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