Carassius gibelio (silver crucian carp): 127970239
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Entry
127970239 CDS
T08819
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
127970239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgib03021
]
127970239
Enzymes [BR:
cgib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
127970239
Transcription machinery [BR:
cgib03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
127970239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
127970239
NCBI-ProteinID:
XP_052428591
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All DBs
Position
B13:complement(6323004..6335317)
Genome browser
AA seq
1132 aa
AA seq
DB search
MDLNKWCNLKSEPSLKHLTEAGFGVPKEKQRVPVQELVKAHIESFDQAVTDGLCRVVEAI
PPVEFMYKGDRISLSFVEAIIHTPAVSKGGISSDLRVFPAECRGRRCTYRGKLVADVSWS
INGIPKGIIKQSLGNVPIMVKSKLCNLHGLSPKELIEHHEEAEEMGGYFIVNGIEKVIRL
LIMPRRNYPIAVSRPKFKSRGQGYTQYAISMRCVRGEHTAINMNLHYLDNGTVMVNFIYR
KELFFLPLGFALKALVDFSDYQIYQELIKGREENSFYKSCVSEMLRMVMEQGCMTKAKVL
NYLGERFRVKLNLPDWFTHEQCAHFLLDECLCIHLKSDVEKFYMLCLMTRKLFGFAKQEC
MEENPDSLMFQEVLTPGQLYLMFLKEKMAGWLVSVKLSLDKRSQRLGGLTADSMTKLFNT
GTDLTRAFEYLLATGNLQSKTGLGMLQDTGLCVVADKLNFIRYLSHFRCVHRGAAFAKMR
TTSVRKLLPESWGFLCPVHTPDGEPCGLMNHLTAHCEIVAPMYPTTTLPALLCSLGVTAA
DGSPGQPYSDCYPVILDGAMIGWVEKEVAPSVIESLRRFKVLGEKKIPPWTEIVLVPQTG
KASLYPGLYLFTTPCRMVRPVRNLGLGKQELIGTFEQVYLNVGIFEEELEQGVTTHQELF
PHSMLSVVAEFIPFSDHNQSPRNMYQCQMSKQTMGFPLHSYQERSDNKLYRLQTPQSPLV
RPAMYDHYDIDNYPIGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSVYKTELIDLS
EKVKGEDSIVFGVKPGDPKVMDKLDADGLPFIGSTLKYGDPYYSYINLNTGQSYVTFFKY
QESCVVDNIKVCSNDTGTGRFKRVCITARIPRNPTIGDKFASRHGQKGILSRLWPAEDMP
FTESGMCPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFKFSEESSALEHFG
EMLKAAGYNYYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDKVTN
QPLGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAQVCMDCGSLLSPLLEK
PPPYWSNTRHRKTICLLCNKSDSIETVSVPYVFRYFVAELAAMNIKIKLDVK
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggatcttaacaagtggtgcaatttaaagtccgaaccgagtttaaaacatttgacagag
gcagggttcggtgtcccgaaggaaaagcagcgcgtgcccgtgcaggagctggtgaaggcg
cacattgaatcattcgaccaggcagttactgatggattatgtcgggttgtggaggccatt
cctcctgtggagttcatgtacaagggagacaggatcagtctgtcgttcgtggaggccatc
attcacactccagcggtctctaaaggaggaatcagcagtgacctgcgggtcttccctgct
gaatgcagaggcaggcgctgtacttacagaggaaagctagtggcagacgtgagttggtct
attaatggcattcccaaaggaattatcaaacagtctctgggtaatgtgccgatcatggtc
aaatcaaaactctgcaaccttcatggtctctcacccaaagaactcatcgagcatcacgaa
gaagctgaggaaatggggggctatttcatcgttaatggcatagagaaggtgattcgtctt
ctgatcatgccgaggaggaactatcccatcgcagtgtcaagaccaaagtttaagagcaga
ggacagggctacactcagtacgctatttcaatgcgctgtgtaagaggcgaacacacagcc
attaatatgaatcttcactacctggacaatggtacggtgatggtgaatttcatttaccga
aaggagctgttctttcttcccttgggctttgcactgaaggctctagtggacttctccgat
taccagatctaccaggagctgattaaaggtcgagaggaaaactccttctacaaaagctgt
gtctcagaaatgctgcgtatggtcatggagcagggctgcatgactaaagccaaggtgctt
aattacctgggcgagcgtttccgggtcaaactcaacctcccagactggttcactcatgag
cagtgtgctcacttcctgttagatgaatgtctgtgtattcacctgaagtcagatgtggag
aagttctacatgttgtgtctgatgacacggaagctcttcggctttgccaagcaggagtgt
atggaggaaaacccggacagtctgatgttccaagaggttctgacaccaggccagctctac
ctcatgttcctaaaagagaaaatggcaggctggttggtatcggtaaaactgtcattggac
aagagaagtcagagactgggaggactgactgcagatagtatgaccaaactcttcaacacg
ggaacagatctcaccagagcctttgagtatctgttagccacaggaaacctccagtctaag
accggtctgggcatgctgcaggacaccggactgtgtgtcgtggcagataagctgaacttc
atccgttacctgtctcatttccgctgcgtgcacagaggagccgccttcgctaagatgagg
accacatctgtgaggaagctgctgcccgagtcctggggtttcctgtgccccgttcataca
ccggacggagaaccgtgcggccttatgaaccacctgacagcccactgcgagattgtggcc
ccgatgtaccccacaacaactctgcctgccctgctctgctctctgggtgtaactgcggca
gacgggagccccggtcagccgtattcagactgttatcctgtcatactggacggagccatg
attggctgggtggaaaaagaagtggcaccatcagtcatcgaatctcttcgcagatttaag
gtgctgggagagaagaagattccgccctggactgagatcgttttggttcctcagacgggt
aaagccagcttgtacccaggcctctatctgttcacgacaccctgtcgcatggtgcggccc
gtccggaacctcggcctgggcaaacaggagcttattggcacctttgaacaggtgtatctg
aacgtgggcatcttcgaggaagagctggagcagggagtgacaacacatcaagagctgttt
cctcacagcatgttgagtgtggtggcagaattcatcccgttttctgatcacaatcagagc
cccaggaacatgtaccagtgccagatgagtaaacagactatgggcttcccgctgcattca
taccaggaacgttcagacaataaactgtaccgtctgcagacccctcagagtcctctggtc
agacctgcgatgtacgatcactacgacattgataattaccctattggcacaaacgcgata
gtggctgtcatttcttacactggctacgatatggaagacgctatgattgtcaataagtct
tcatgggagcgtggctttgctcatggttcagtttataagactgagctcatagacctgtcc
gaaaaggtcaaaggtgaagacagcatcgtgtttggggtgaagccaggtgaccccaaagta
atggacaagctggatgcagacggattgccgtttattggctccacgctgaagtatggagac
ccttactacagctacatcaatctcaataccggccagagctatgtgaccttcttcaagtat
caggagagctgtgtggtggacaacatcaaggtgtgcagcaatgacaccggcactggccgc
ttcaaacgtgtttgcatcacagcccgtattcccagaaaccccaccatcggagacaagttc
gccagcagacacggtcagaagggaatcctgagccgcctgtggcctgcggaggacatgccc
ttcaccgagagcggcatgtgtccggacatcctgttcaacccgcacggcttcccctccaga
atgaccatcgggatgctcatcgagagcatggctggaaaatccgcagccctccacggcctg
tgtcacgacgccaccccattcaagttctctgaggagagttctgcgctcgagcacttcggc
gaaatgctgaaagcagcaggatacaactactacggcacggagcgcctctactctggcatc
agcggcttggagctcgaggcggacatcttcatcggggtggtttactaccagcgcctgcgt
cacatggtctccgacaaattccaggtcagaactacgggagcgagagataaagtgaccaat
cagccgctgggagggaggaacgttcagggaggaatccggttcggagagatggaacgagac
gctctgctggctcacgggacatcgttcctgctccacgaccggctgtttaattgctccgat
cgttctgtggcacaggtttgcatggactgcggtagcctgctgtcaccgcttctggaaaag
cctcctccttattggtcaaatacacgccatcggaaaaccatctgcttgctgtgcaacaag
agcgactctattgagactgtgtccgttccttatgtgtttagatacttcgtagcagagctt
gcggcaatgaacatcaaaatcaaattagacgtcaagtaa
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integrated database retrieval system
