Carassius gibelio (silver crucian carp): 127970322
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Entry
127970322 CDS
T08819
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease DNA2
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
127970322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgib03032
]
127970322
Enzymes [BR:
cgib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
127970322
DNA replication proteins [BR:
cgib03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
127970322
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
127970322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
Dna2_Rift
AAA_30
AAA_19
PDDEXK_1
DEAD
nSTAND3
SRP54
bpMoxR
UvrD-helicase
ResIII
AAA_22
AAA_25
PIF1
SLFN-g3_helicase
CbiA
MobB
AAA_7
AAA
T2SSE
Motif
Other DBs
NCBI-GeneID:
127970322
NCBI-ProteinID:
XP_052428793
LinkDB
All DBs
Position
B13:19457476..19471283
Genome browser
AA seq
1350 aa
AA seq
DB search
MIKCKSRKSSMVTGVQSNISAFFVSKASPKSPKKIAAGITRFPVSLKTGFMEDRNVPSSP
TPSAVPETPDSLRSENPSDTSYENCSPVSRGLHTKGVRGKPSLMARKLMQPQKTSSPEPE
DTFELKNGVSHSGSVKRLLQSSENIQSAKRSRTMQKPPDRDASSPGANRNAFSNSLGKKI
KAESVSFESMNGETNGFSKPLKKSQHLSFSTSGKENSLAVNLKPEIDTSTVSGTNDFDLV
MSYSSWIQNGSTEDKEPFLSCPLTKKRPLSTADLQAKDKIADGKTLPVPFEDDFTDLIDD
WFDDGMEQKLETPKPKKFSHEKNKSIPEHVILASGVHNRYWVLDVRDITSSRNCTEKHLT
ITCSKTAQSRETCILKDGWESTPVAVGDVIHLEGRCVSGSWTIDRDSGFLVLLPDLLISG
TSIANSIRCMRRGVLGEMFKAFDGGSKQMLNGTIVHDIFQKAAMSSDFSLERIQRLAAEA
LRNPNYLGQMYSLKLTQADMKQEVDEYLPSLSEWSKHYLHTSPQAGQKQLTLKLPSDGAL
SKQDATCSVTFTDFADIEENIWCPRFGLKGKIDVTAGVRIHRRGRKPTERIVPLELKTGK
ESNSIEHRSQVILYTLMSSSRRCDPEAGFLVYLKTGSLHPVVGNHMDRRELIKIRNSLAH
HIGNNLIKEKGKSRMAPLPAIVSDQQACKYCPQKRNCAVYSRAIERDPMENCSEDPQAFV
QSESEHLSRVHLQYFSHWLLLCMLEALTMENKAGRRNIWLQTAQQREKSGGCVGNMQLAG
DVSVVSDGVYKHSFVRKESDQTLTGLIVGDRIVVSDQDLMLIGLATGYVTEITVSGVTCS
LDKNLSKYSLNTIFRLDQDEGAGGLSTHLGNLSMLMENTPNSERLRELIVEFRPPQFIDS
LSSVLPRDAKDTVASILKGLNKPQKQAMKKVLLSKDYTLIVGMPGTGKTTTICTLVRILH
ACGFSVLLTSYTHSAVDNILLKLKRFKIGFLRLGRSQKVHHDILPFTEESCRAKGIQTLE
ELEQLYNKELIVATTCMGVKHPIFSRRRFDFCIVDEASQISQPVCLGPLFYAQRFVLVGD
HQQLPPIVQNAEARTLGMDESLFKRLEHHSDAVVQLNVQYRMNSAIMSLSNALMYEGRLE
CGSERTASAVLQLPGRAQVEKELDLFVCQPQYSAWVQAALDPNSPVCFLDTSEVPAPETV
EKSGISNHMEAILVHAIVTLLLKAGCRASDIGVIAPYRQQLKAISSLLQGDAYKALEVNT
VDKYQGRDKSVIIVSFVRSNPEGNLGELLQDWRRLNVAITRAKHKLLMLGSAPSLRRYAP
LEKLLCHLQQEDMIFQLPAAAHEALPRIHL
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtgtaaatccagaaaatcttccatggtcactggagttcagtcaaacatttct
gccttttttgtttcaaaggcttcaccaaagtcacctaaaaaaatagcagctgggattaca
agattccctgtttcattgaagactggttttatggaggatagaaatgtccccagctctcca
accccttctgcagtcccagagacgcctgacagtctgaggagcgagaacccttcagacact
tcctatgagaactgctcacctgtctcccgtggcctgcatactaaaggtgtcaggggtaaa
cctagcctgatggcacgcaagctgatgcagccacagaaaaccagcagtccagagccagaa
gacacttttgagctcaagaatggcgtaagtcactctggctctgtgaagaggttgttgcaa
agctcagagaacatccagagtgccaaacggtccaggaccatgcagaaaccacctgatcgt
gatgcaagctctccaggggccaatcgaaatgctttttcaaatagtcttgggaaaaaaatt
aaagcagagtctgtcagttttgagagtatgaatggagaaacaaatggattctcaaagcct
ttaaaaaaatctcaacatctgagctttagtactagtggaaaagaaaattcacttgctgta
aacctgaagccggaaatagacacgagtacggtttctggaacgaatgattttgatcttgtg
atgtcatacagttcatggatacaaaatggatctactgaagacaaagagccttttctcagc
tgtcctcttactaagaagaggcccttgagtactgctgatctgcaagcgaaagacaaaatt
gctgatggaaaaactttgccagttccatttgaagatgactttactgatctaatcgacgat
tggtttgatgatggcatggagcaaaaattggagacgccaaaacccaagaagttcagtcat
gaaaaaaacaaaagtataccagagcatgttatactggcctctggtgttcataaccgatac
tgggttctggatgtacgggacatcacctcatcacgaaattgcactgagaagcacttaacc
atcacctgctccaagacggcacagtccagagagacctgtattctcaaagatggctgggag
agtactccggttgctgttggggatgtcattcacttggaagggaggtgtgtttctggctcg
tggacgattgatagagactctggcttcctggttctgctgcctgacctgctgatttcgggg
accagcattgccaacagtattcgctgcatgaggcgaggggtgctgggagagatgtttaag
gcatttgatggtggatctaagcagatgttaaatggtaccatagttcatgatatcttccaa
aaagcagccatgtcctcagatttctccctagagaggatacagaggcttgctgcggaggcc
ctaagaaaccccaactacctcggacaaatgtatagtctaaagctgacccaggctgacatg
aaacaggaagtagatgaatatcttccctctttatctgagtggtcaaaacactacctccac
acttcaccacaggccggacaaaagcagctcactctcaaactccctagtgacggggctctg
agcaagcaagatgccacctgtagcgtgacattcacagattttgcggacatcgaggagaac
atctggtgtccacgttttggcctgaaggggaagatcgatgtcacagctggagttaggatt
catcggagaggcagaaagcccacagagaggattgtgccgctggagctgaaaaccggcaag
gagtcaaactccattgagcatcgcagtcaggttatcctgtacactttgatgagctcatct
agacgttgcgatccagaggcaggtttcctagtctacttgaagactggcagtctacatcct
gttgtgggcaaccacatggacaggagagagctgattaaaataagaaactcattggcccat
cacatcggaaacaatcttattaaggagaaaggaaaaagtcgaatggccccattgcctgcc
attgtgtctgaccagcaggcatgcaagtactgtcctcagaaaaggaactgtgcagtttac
agcagagctatagagagagatcccatggagaactgtagtgaagatccacaggcctttgtg
cagtcggagagcgagcacctcagccgtgtgcacctccagtacttcagccactggttgctg
ctctgcatgctggaggctctcaccatggagaacaaagcaggtcgccgcaatatctggctt
cagactgcccagcagagggagaaaagtggtggctgcgtgggtaacatgcagttagctgga
gacgtcagcgtcgtgtccgatggtgtatataagcacagctttgtgaggaaggagagcgat
cagacactgactgggctgatagtgggtgacaggattgtggtcagtgatcaggacttgatg
cttataggcctagccacgggatacgtcacagaaataactgtcagtggagtgacttgctct
ttggacaaaaacctttccaagtattccttaaatacgattttccgactggaccaggatgaa
ggtgcaggcggtcttagcacccatttaggaaacctatctatgttaatggaaaacactcca
aacagtgaaagactgagggagctgattgtggaattcaggcctcctcagttcattgacagc
ctcagcagtgttttgccacgagacgccaaggacactgtggccagcatcctgaaaggactc
aacaaaccccagaaacaagccatgaaaaaagtgctactatccaaagactacacgcttatt
gtgggaatgccaggtactgggaaaactaccaccatctgtacactggtacgtatactccat
gcttgtggcttcagtgtacttctgactagctacactcactctgctgtggacaacatcctc
ctgaaactaaagaggtttaagattggcttcctgcgactcggtcgttctcaaaaagtgcac
catgacatcctgcccttcacagaggagtcatgtcgggccaaaggcatccaaacactagaa
gagctggaacaactgtataacaaagaactgattgtggccaccacctgtatgggtgtaaag
cacccaatattcagccgtagacgctttgacttctgcatcgtggatgaggcatctcagatc
agtcaacctgtatgtttgggtccgctgttctacgcccagcgctttgtcctggtgggagac
caccaacaacttcctccgattgtacagaatgctgaagccagaacactgggcatggatgag
agtttgttcaaacgtctggagcaccatagtgatgcagttgttcagctgaatgtgcagtac
cgaatgaacagtgcgatcatgtccctgagcaatgctctgatgtacgagggccgactggag
tgtggctctgagaggacggcaagcgcggtgctgcagctgcccggtagagctcaggttgag
aaggagctggacctgtttgtgtgtcagccgcagtatagcgcttgggtccaggctgcactg
gatcccaatagtcctgtctgtttcctggacacgtctgaggttcccgctcctgagacggtg
gagaaaagtggcatcagcaaccacatggaagctatattggtccatgcaattgtcactctg
ctactcaaggctggatgcagagcgtctgatattggggtcattgctccatatcgacaacag
ctaaaagccatctccagtctgctccagggagacgcctataaagctctggaagtcaacaca
gtggacaaataccaaggacgtgacaaaagcgtcatcattgtgtcctttgttcgaagcaac
cctgaaggcaacctgggtgagttgctccaagactggcgcaggctgaatgtggccatcact
agagccaaacacaagctcctcatgctgggctcagcgccctctcttcgccgctacgcaccg
ctagagaaacttctctgccaccttcaacaggaagatatgatcttccagctgcctgctgct
gcccatgaggcactacccagaatccacttgtga
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