KEGG   Carassius gibelio (silver crucian carp): 127970339
Entry
127970339         CDS       T08819                                 
Name
(RefSeq) thrombospondin-2
  KO
K04659  thrombospondin 2/3/4/5
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04145  Phagosome
cgib04510  Focal adhesion
cgib04512  ECM-receptor interaction
cgib04518  Integrin signaling
cgib04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127970339
   04518 Integrin signaling
    127970339
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127970339
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127970339
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127970339
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cgib04131]
    127970339
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    127970339
   00536 Glycosaminoglycan binding proteins [BR:cgib00536]
    127970339
Membrane trafficking [BR:cgib04131]
 Endocytosis
  Phagocytosis
   Opsonins
    127970339
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   127970339
  Exosomal proteins of colorectal cancer cells
   127970339
  Exosomal proteins of bladder cancer cells
   127970339
Glycosaminoglycan binding proteins [BR:cgib00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   127970339
SSDB
Motif
Pfam: TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd EGF_3 TSP1_CFP_C TSP1_ADAMTS cEGF Laminin_G_2 TSP1_CCN
Other DBs
NCBI-GeneID: 127970339
NCBI-ProteinID: XP_052428810
LinkDB
Position
B13:complement(8981466..9003367)
AA seq 1175 aa
MILRRNFYLLPLLLLCIRALPQDGHVEDESVFDLFKISSISRKTIGAKLFKGHDWDSPAY
RFIRFDHVPAVSTPALHQILKQVQNNEGFVFVASIRQDKGSRGTLIGLEGPSGSRQFEIV
SNGRANTLDLLYMVKGSQNVVSFEDVDLSDSQWKNITLYIHGENAHLYVGCSLIDSVILD
EPFYEHLRPEGSQMFVAKGSIRENHFRGLLQNVQFIFDTPIEDILRNKGCVIAKPEEVNV
VNESTETVSVGTAISTNFIGQKEKMASDVCERSCEEITNMVQELKGLRIVVGNLIDGLQK
VTEENTVMKEVLGNMKNIKDKRMCWQDGRLFEDKEDWVVDSCTKCTCQESKIVCHQITCP
PVSCASPTFLDGECCPVCLPKDSEDGWSPWSEWTECTVTCGTGTQQRGRSCDATSNPCSG
PSIQTRRCNLGKCDSRVRQDGGWSLWSPWSSCSVTCGEGQITRIRHCNSPVPQLGGKDCE
GSGRETKKCEAKPCPIDGAWGPWSPWAICSATCGGGTRTRTHVCNSPHPQYGGKKCPGES
KDTDSCNKQDCPVDGCLSNPCFGGVDCTGSADGSWECGPCPVGFRGNGTFCEDVNECDMV
PDLCFKSGESQRCVNTDPGFHCLPCPPRYKGNQPFGMGVEAAKLNKQVCEQENPCKEKTH
NCHRSAECIYLGHFTDPMFKCECKIGYAGDGLICGEDSDLDGWPNQNLVCGANQSYHCKK
DNCPNLPNSGQEDFDKDGQGDACDKDDDNDGIMDEADNCPLLYNPRQFDYDKDLVGDRCD
NCPYEHNPAQIDTDGNGEGDACSVDIDGDGVLNEHDNCPYMYNTDQKDTDMDGVGDQCDN
CPLLHNPEQTDSDNDRVGDECDNNQDIDEDGHQNSLDNCPYIPNANQADHDKDGKGDACD
FDDDNDGIPDDKDNCRLVPNKDQLDSDGDGRGDVCRDDFDNDNIPDILDVCPENDAIGNT
DFRKFQMVHLDPKGTTQIDPNWVVRHQGKELVQTANSDPGIAVGFDEFNAVDFSGTFYVN
TDRDDDYAGFVFGYQSSSRFYVVMWKQITQTYWEVNPSKAFGIAGVSLKVVNSTTGTGEH
MRNALWHTGDTPGQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQIMADS
GPVYDKTFAGGRLGLFVFSQELVYFSDLKYECRDN
NT seq 3528 nt   +upstreamnt  +downstreamnt
atgatactcaggagaaatttctacttgctgcctttgctgttactatgcatcagagcacta
cctcaagatgggcatgtggaagatgaatccgtcttcgaccttttcaaaatcagcagcatc
agcagaaagacgatcggtgccaagctcttcaagggccacgactgggactcgcctgcatat
cgctttatacgctttgatcacgtccctgctgtaagcaccccggccctccatcagatccta
aagcaggtccagaacaatgagggctttgtgtttgtggcctccatacgacaggacaagggc
tccaggggaaccctgattggtctggagggccccagtgggagccgtcagtttgagattgtg
tccaatgggcgagccaacacgttggatctcctttacatggtcaagggatctcagaatgtt
gtgtcgtttgaggatgtggacttgtctgattcgcagtggaagaacattacgctgtacatt
cacggagagaatgctcacctctatgtaggctgtagcctcattgacagcgtgatcctggat
gagcctttctatgaacatctgcggccggagggcagtcagatgtttgtggccaagggatct
atcagggaaaaccacttcaggggtttactacagaatgtacagttcatttttgacacacca
atagaggacatcctaagaaacaaaggttgtgtgatcgccaaacctgaggaagttaacgtg
gttaatgaaagtacagagactgtgtctgttggtacggccatctccaccaacttcattggg
cagaaggaaaaaatggcatcggatgtgtgcgagcgctcctgtgaggaaatcaccaacatg
gtccaggagctcaaaggtctccgtattgttgtgggcaatctcatcgatggcttgcaaaaa
gtgactgaggagaacactgtgatgaaggaggtgctggggaacatgaagaacatcaaagac
aagcgcatgtgctggcaagacggccgtctctttgaggataaggaggactgggttgtggac
agctgcaccaagtgtacctgtcaggaatcaaagattgtatgccatcagatcacatgtcct
ccagtatcctgtgccagccctactttcctagatggtgaatgctgtccagtgtgtctgcct
aaagacagcgaagatggctggtcgccttggtccgaatggacggagtgtaccgttacatgt
ggaacaggcacccagcaaagaggcaggtcatgtgatgccacaagtaacccctgcagtggc
ccctccattcaaacccgcagatgcaacttgggaaaatgcgacagtcgtgtccgtcaagat
ggtggttggagtttgtggtcaccctggtcgtcatgctctgtgacgtgtggagagggacag
atcacgcgaattcgccactgtaactcccctgttcctcagctgggaggaaaggactgtgag
ggcagtgggagagagactaaaaaatgtgaagctaaaccctgtccaattgatggagcctgg
ggcccatggtctccttgggcgatctgctccgccacctgtgggggaggaacaaggacacgg
acacatgtgtgtaacagccctcatccgcagtatggtggcaagaaatgcccaggggagtcc
aaggatactgattcctgcaacaagcaggactgtcctgttgatggttgtctatctaaccca
tgcttcgggggtgttgactgcactggctccgctgacggctcgtgggagtgcgggccctgc
cctgtcggtttccgtggcaatggaacattctgtgaggatgtgaatgagtgtgacatggtg
cctgatctttgttttaaaagtggtgaatcccagcgctgtgtcaacacagacccaggattc
cactgcttgccttgccctcctcgatacaaaggcaatcagccctttggaatgggagtggag
gctgccaagctaaataagcaggtatgcgagcaagaaaacccctgcaaagaaaagactcac
aactgccacaggtccgctgagtgtatctacctcggccacttcactgaccccatgtttaaa
tgtgagtgtaagatcggctatgctggggacggccttatctgcggcgaggactctgacctt
gatggctggcccaatcagaacctggtgtgtggagccaaccaatcctatcactgcaaaaag
gacaattgtcccaaccttccaaactcaggccaagaagacttcgataaagacggtcaagga
gacgcctgtgacaaagacgatgataatgatggaataatggatgaggcggacaactgtcct
ctgctgtacaatccgaggcaatttgactacgataaagatcttgtgggtgaccgttgtgat
aactgtccatatgagcacaaccccgctcagatcgacacagacggtaatggcgagggagat
gcctgctctgtagacattgatggagatggggttctgaatgagcatgataactgcccctat
atgtacaatactgaccagaaggacaccgatatggatggagtgggagaccagtgtgataac
tgtcctctgctgcacaaccctgaacagactgactccgataatgaccgagttggtgacgag
tgcgacaacaatcaggacattgatgaggacggccaccagaacagcctggataattgtccc
tacattcccaatgccaaccaggccgaccatgacaaagatgggaaaggagatgcttgtgat
tttgatgatgataatgacggaatccctgatgacaaggacaactgcagactggtgccaaac
aaagatcaactggactctgatggggatggaagaggcgatgtttgcagagatgattttgac
aatgacaacattccagacattttggatgtgtgccctgagaacgacgccatcggtaacact
gacttccggaagttccaaatggtgcatttggaccccaaaggaactacacaaattgatccc
aactgggtggtcagacatcagggcaaagagttggttcagacggccaattctgaccccggt
atcgcagtgggtttcgatgagttcaacgccgtggatttcagtggcactttctacgtcaac
actgacagagatgacgattacgctgggtttgtgtttggatatcagtccagcagtcgattt
tatgtggtaatgtggaagcagataactcagacgtactgggaagttaatccttcaaaagct
tttggcatcgctggtgtttctctgaaagtggtcaactctaccacgggcacaggggagcac
atgcggaacgccctctggcacaccggtgacactcctggacaggtccgcacactgtggcac
gaccctaagaatatcggctggaaggattacactgcgtacaggtggcatctcatccacaga
cccaagacaggattcatcagagttgtggtttatgaggggaaacagatcatggcagactcg
gggccggtttatgataaaacctttgcaggagggagattaggactgttcgtgttttcccaa
gaactggtttacttctctgatctcaagtacgagtgtcgagataactga

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