Carassius gibelio (silver crucian carp): 127970439
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Entry
127970439 CDS
T08819
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cgib03009
]
127970439
Ribosome biogenesis [BR:
cgib03009
]
Eukaryotic type
90S particles
Other 90S particles
127970439
Pre-60S particles
Other pre-60S particles
127970439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
MMS19_C
ARMC9_ARM
Motif
Other DBs
NCBI-GeneID:
127970439
NCBI-ProteinID:
XP_052428991
LinkDB
All DBs
Position
B13:11322918..11332932
Genome browser
AA seq
1284 aa
AA seq
DB search
MVKSGKLRSGTAQKIRRWKKGHSSDSNPETSRHRKAARGRYFSRPSEKSDLTVDSLKLHN
ELQAGCLQRSSDAMEAGDAMEDQALTEKTSGTFLSGLSDCSNLTFRKVQRYWESNSAAHK
EICAVLAAVTEVIRSQGGKETETEYFGALMTTLEAVDSSESLAAVAYLLNLVMKRMPVAV
LKKKFSDTAKVLLDIMSNQASSDSVSSLRWIISCLATLLRKQDLSVWSYASTLQMYQGLL
VFTVHSKPKVRKAAQLGVCAVLQYSDFMFSDNAPVHHPAAAATAKFCCKELEQSGGSKED
TTTLHVLGLLKDLLSALPLSSVKSCCETLLRLMTLSHVLVTANAMQAFHKLFSSKPCPAS
MSAELNAQIITALYDFVPSENDLQPLLAWLAVMEKAHAHLASLQSSLSISHLPRLFSVTM
ACLLSPHTQVVSAATQTLKTLLNQCVAPHMAEIGSVLPNTSAGNGACILKMFRIVEEGLS
YRFHASWPFVLQTLGCFYRAAGKQAHPIMIKSLQSLGDLRATPQFPFSGELDLAVGSAVE
SMGPEVVLKAVPLLITGTDDDLEFPRSWLIPVIRDHVKNTQMAYFISYFFPLANKLKQTA
DELEQSGQKLIAKVYQTLQMQIWTMLPGFCTKPTDLLTSFKGFARSLGMTLNDRPDLRLC
ICQALRTLINKSCETEEEKAELQRFSKNFLPILFNVYSQPPIPGETASARMAVLDTIRVY
LSITEQAMVCTFLQKASERLNSADNSKFTRLSVIDLIVAMAPCVDEASMTQTFSLIKPFV
ESKDSRIQKKAYRVLEEICGGESASCKAFVLQNLEQLKTMLMDSLTTAASSSKRPRLKCL
IHIVKQLNEEHRDFITALLPEVILCTKEMSIGARKNAYSLLVEIGNAFVRFCGNTKDAIN
EYLGHVFIGLTGSVTMITCTVLALTRLVFHYKDSIDVSSLEALLQNVCLLLSSRTRDVVK
ASLGFLKVLLFSMDVKVLASHIALIMEGISNMNDMRRHFRVKLKNIYTKLFRKFGFELVK
SMLPADQQKILVNIRKTEARNKRRKLVIKTEEDGSDTEDEKPKVKAESIEDILAETDSDS
DEDEKPKKGQKKPMKKGQAWLKEGVSDEPLNFLDPKAAQRVLATNPNLKKAIKTEHGFKM
TSDGRLIIKEEVEDDDSKTKDAEMDDVLEEAGVKTKKNPKRKMHDDLDDDDMDVKPAMEY
KAGGIGIHRPLDRRPEFGKEYKSKKGKGDVKKAGKCDPYAYVPLKKDQLNRRKKAKLQGQ
FKGMVRGAKKGASSGSRILKKRKA
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagtccggaaaacttcgatccggaacagcacagaaaatcaggcgatggaagaaa
ggtcacagtagtgactccaatccggagacaagtcgccatcgaaaagccgcgagaggccga
tatttcagccgtccctctgaaaaaagtgatctgacagtagattccttgaaactccacaat
gagcttcaggcaggatgtctgcagagaagcagtgatgccatggaagcaggagatgccatg
gaggatcaagccctgacagagaaaacctctgggacttttcttagtggactgtcggactgc
tccaacctcacttttagaaaagtacagcgctactgggagtcaaactctgcagcacataaa
gagatctgtgctgtattggctgctgtaactgaagtgattcgctctcagggaggaaaggag
acggagacagagtactttggagctttgatgacaacactcgaagctgtagatagcagtgaa
tctctggcagctgttgcctatctcttaaacctggtcatgaaaaggatgcctgtggcagtg
cttaagaagaagttctcagacacagcaaaggttttactagatatcatgtcaaaccaagcc
agttctgactccgtgtcctctctgcgatggatcatatcctgtcttgcgactttgctgcgt
aaacaggatctgtcagtctggagttacgcttcaactttacagatgtaccaggggcttttg
gtcttcacggtgcactctaagccaaaggtgcgtaaagcagcacagctgggtgtttgtgca
gtccttcagtacagcgacttcatgttctctgataatgccccggtccatcacccagcagca
gccgccacagccaaattctgctgcaaagaattggagcagtcaggaggcagcaaagaagac
actaccactctgcatgtgctgggtcttctgaaagacctgctgtctgctcttcctctgagc
tctgtcaaatcttgctgtgagacccttctccgtttgatgaccctgagccatgtgctggta
acagcaaatgcaatgcaggctttccacaagcttttcagcagcaagccttgtcctgccagc
atgtctgcagaactgaatgcacagatcatcacagctctatatgactttgttccaagtgag
aatgatctgcagcctttactagcatggcttgctgtaatggaaaaagcccatgctcatctt
gccagtttacagagctctctgagcatcagtcatcttcctcgcctcttctctgtcaccatg
gcttgtcttctgtctccacacacacaagttgtctctgctgcgactcagactctgaagact
ctgttaaatcagtgtgtggctccgcatatggctgaaatcggatccgttttaccaaacaca
tcagctggaaatggggcttgcatcttaaagatgtttcgtatcgtggaggaaggattgtcc
tatcgttttcatgcctcttggccgtttgtgctgcagaccttgggctgcttctaccgagct
gcaggaaaacaggctcatcctattatgataaagagtctgcagtctctcggtgaccttcgg
gccacccctcagttccccttctctggagagctggatctggctgtgggcagtgcggtggag
agcatgggcccagaggtggtcctgaaagctgtgcccctcctcatcactggaacagatgat
gacctggagttcccgcggagctggctgatcccagtcataagagatcatgtgaaaaacact
cagatggcttacttcatctcatactttttccctctggcaaacaaacttaaacagacagct
gatgaactggagcagtcaggacagaagttgattgctaaagtgtatcagactctacagatg
cagatttggaccatgttacctgggttctgcactaaacccaccgatctgttgacatcgttt
aagggctttgctcggtctctgggtatgaccctaaatgatcgccctgacctccgcctgtgc
atctgccaggccttgcggactctcatcaacaagagctgtgaaacagaggaggaaaaggca
gaattgcaacgattttccaagaacttccttcccatcctatttaacgtctacagtcagccg
ccgatacctggagagacggcgtctgctaggatggctgtcctggacacaatccgagtctac
ctgagcattacagaacaggcgatggtgtgcacatttctgcagaaagcatcagagagactc
aacagtgcagacaactctaaattcacacggctttcagttatcgacttgattgtggcaatg
gctccgtgtgtagatgaagcatccatgacccagacattcagtttgattaaaccctttgtg
gagagcaaggattctaggatccagaagaaagcctaccgtgtgctggaggaaatttgtgga
ggagagagtgcgtcttgtaaggcttttgttctgcagaatctcgagcagctgaaaacgatg
ctgatggacagcctgacgacagcggcatcatcttccaaacggccgagactcaagtgtctg
attcacatagtgaagcagctgaatgaagaacaccgtgatttcattacagctctgcttcct
gaggtcattctttgcactaaggaaatgtctattggtgcccgcaaaaatgcctactctctc
ctagttgagattggaaatgcatttgtaaggttttgtgggaacacaaaagatgccataaat
gagtatttaggccatgtgtttattggactaactggctctgtaacgatgatcacctgtaca
gttctggctttaacaagacttgtgttccactataaagattccatcgatgtgtcctcactt
gaggctctgctgcaaaatgtgtgtctgctgctttcgagcaggacgcgggatgtcgtcaaa
gcctctctgggtttcctaaaagtcttgctattttctatggatgtcaaggttttagccagc
catattgctcttattatggaaggcatcagcaatatgaatgacatgcgaagacattttagg
gtgaaacttaagaacatttacaccaagttgtttaggaaatttggatttgagcttgtcaaa
agcatgttgccggctgatcaacagaagattctagtgaatatccgtaaaacagaggccagg
aataagagacgcaaactcgtgatcaagacagaagaggacggatcagacactgaggatgag
aagcctaaagtgaaagcagagagtattgaggacattctggccgagacagactctgattca
gatgaagatgagaagcctaaaaagggtcagaagaagccaatgaaaaagggccaggcctgg
ctaaaggaaggcgtatctgatgaaccactcaacttcctcgatccaaaagcagcacagaga
gttttggccaccaacccaaatctaaaaaaggccatcaaaacggagcatggattcaagatg
acatccgatggaaggctgatcatcaaagaggaggttgaagacgatgattctaaaactaaa
gatgctgaaatggatgatgtacttgaagaggctggagtcaaaactaagaagaatcctaag
aggaaaatgcatgatgatctagacgatgatgatatggatgtcaaacctgcaatggaatac
aaagctggtggcattggaatccacagacctctggatagaagaccagagtttgggaaggag
tacaaatctaagaagggaaaaggtgatgttaagaaggctggcaagtgtgacccatatgcc
tatgtaccattgaagaaagaccagcttaaccgcaggaaaaaggccaaacttcaaggccag
ttcaaaggcatggtcagaggggccaaaaaaggagcaagctctggatcgaggatactgaag
aagaggaaagcataa
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