Carassius gibelio (silver crucian carp): 127970479
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Entry
127970479 CDS
T08819
Name
(RefSeq) LIM domain-binding protein 3a
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127970479
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
127970479
Domain-containing proteins not elsewhere classified [BR:
cgib04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
127970479
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
DUF4749
PDZ
PDZ_6
PDZ_2
LIM_FHL2-3_N
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
127970479
NCBI-ProteinID:
XP_052429034
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All DBs
Position
B13:19295196..19331442
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AA seq
705 aa
AA seq
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MSSYNVSLAGPSPWGFRLQGGKDFNMPLTVSRITPGSKAASSNLNQGDIIVAIDGVSTEG
MTHLEAQNKIKSANFNLALTMQRSKRPIPVTMTTPRINSPMPVIPHQKVITNTSANTEYL
PSFNPIALKDTALSTNKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQSQARGS
EMSGNLPVKERVIDSASPVYQAVIPSETNELGPADWAKRAAQLQSKSFRVLAHITGTEYM
QDPDEEALRRSREMFESEAKGPRFAKLKNWHHGLSAQILNVPQFVKFLISLPPNLVSSTP
AEHAPVSTSIAPVCPPTIAASPNELLSEPQIANQAPEPDAGQNPEQTLVTSFNLQSSMGY
SSQYKTSVSSSYSQHPPMQQPPPPMQHSSIQIPVGAPPPKVVSTATIVPAAYSAAPAPAP
PMVHKPAPPPPAPAAAPASSSNRPPWVTDENFAHKFDPSKPTTTTNIRVQPLPQAAPPPP
TYIPNPVPAPAPAPAAPSPAFNPAPFPPVARGVAQRAERFAASNRTPLCGACNSIIRGPF
LVALGRSWHPEEFNCHYCHTSLADVSFVEEQNNVYCENCYGEFFAPTCARCNTKIMGEVM
HALRQTWHTTCFVCAACGKPFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDFPVEAGDKF
IEALGHTWHDTCFVCAVCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgtacaacgtttcactcgctggaccttcgccttggggcttccggttgcaagga
ggcaaggacttcaacatgcccctcaccgtttccaggattacaccagggagtaaggcagcc
tccagcaacctgaaccagggtgacatcatcgtggccattgatggggtcagcacagagggg
atgacacacctggaggcccaaaacaagatcaagtctgccaacttcaatctggccctcacc
atgcaaaggtcaaagcggcccattccagttaccatgacaacaccaaggattaactcccct
atgcctgtgatccctcatcagaaggttattaccaacacttctgccaacactgagtacctg
cccagcttcaacccaatagctctgaaggacactgcactctccaccaacaagcccattgag
gtgaaggggcctggaggcaaggccaccatcatccatgcacagtacaacacccccatcagc
atgtactcccaggatgctattatggatgccattgctggccagtcccaggccaggggtagc
gagatgtctggtaatctgccagttaaagagcgtgttatagacagtgcttccccagtgtat
caggccgtcatccccagtgaaaccaatgaactggggccagctgattgggccaaaagagcc
gcccagctgcagtccaagtccttccgtgtccttgcccacattactggaactgaatacatg
caagaccctgatgaggaagctctgagaaggtcaagggaaatgtttgaatctgaagccaaa
ggccctcgttttgctaaactgaaaaactggcaccatggcctgtcggcacagatacttaat
gtgcctcagtttgttaagtttctgatatcactgccacctaaccttgtatctagtactcct
gctgagcatgctccggtttccaccagtattgcacctgtgtgtccgcctactattgctgct
tcacccaatgagctcctttcggagccgcagatagccaatcaggcgcccgagcctgatgcg
gggcagaatcctgagcaaaccttggtaaccagcttcaacttgcagtcctctatgggttac
agttcccagtataaaacctccgtctccagttcttactcccagcacccacctatgcagcag
ccaccaccacccatgcagcacagctccatccagatccccgtaggtgcacctccacctaaa
gtggtcagcactgccaccattgtgcctgcagcctactcagctgccccagcaccagctcct
ccgatggttcacaagcctgctccacctccacctgctcctgccgcagctccagcatcttct
tccaacaggcctccttgggttactgatgagaactttgcccataaatttgaccctagcaaa
cccacaaccaccacaaacatcagagtgcagcctcttccccaggcggccccacccccacca
acctacatccccaaccccgtccctgctcctgctcccgctcctgctgcacccagccctgca
ttcaaccccgcccccttcccacctgtggctcgtggagttgctcagagggcagagcggttt
gcagccagcaacagaacgcctctgtgtggtgcctgcaacagcatcatcaggggaccattc
ctggtggcactgggtcggtcctggcatccagaggagttcaactgccattattgccacacg
tctctggctgatgtcagctttgtggaggagcagaataatgtttactgtgaaaactgctat
ggagagttctttgcacctacatgtgcccgctgcaacaccaagatcatgggagaagtgatg
catgcactgcggcagacctggcacaccacttgctttgtgtgcgcagcttgtggaaagcct
tttggaaacagcctcttccatatggaggacggtgagccgtattgtgagaaagattatatt
gcactcttcagcacaaagtgccatggctgtgacttcccagttgaggcaggagacaaattt
attgaagctcttggccacacatggcatgatacctgctttgtttgtgcggtgtgccatgtg
aacctggaaggacaacctttctactccaagaaggacaagcccttatgcaagaagcatgca
catgccatcaatgtgtag
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