Carassius gibelio (silver crucian carp): 127970874
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Entry
127970874 CDS
T08819
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127970874
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127970874
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
PSMbeta
Motif
Other DBs
NCBI-GeneID:
127970874
NCBI-ProteinID:
XP_052429526
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All DBs
Position
B14:complement(22408756..22411110)
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AA seq
299 aa
AA seq
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MYSMMETEIKSPLPQSNTGSAAGGKNNSSNDQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGANAVNNAVSVGQRMDYTHMNGWTNSAYSLMQDQLAYPQHPSMNSPQIQQMH
RYEMAGLQYPMMSTAQTYMNAASTYSMSPAYTQQTSSAMGLGSMASVCKTEPSSPPPAIT
SHSQRACLGDLRDMISMYLPPGGDSADHASLQSSRLHSVHPHYQSAGTGVNGTLPLTHI
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatggaaaccgagattaaaagcccccttccgcagtccaacacgggctcg
gcggcgggcggcaaaaacaacagttccaacgaccaggaccgggtgaagcggcctatgaat
gctttcatggtgtggtcccgcggccagcggaggaagatggcacaagagaatcccaaaatg
cacaactctgagatcagcaagcgcctcggtgctgactggaaacttttgactgacgccgag
aagagacctttcattgatgaggccaagcgcttacgagccatgcacatgaaggagcacccg
gattacaaataccgtccccgcaggaagaccaagaccctgctgaagaaagacaagtattcc
ttgcccggaggactcttggcacccggtgccaacgctgtcaacaacgccgtgtcagtgggc
cagcggatggactacacgcacatgaacggctggacgaacagcgcgtactccctcatgcag
gaccagctggcctaccctcagcatcccagcatgaacagcccccagatccagcagatgcac
cggtacgaaatggcggggcttcagtaccccatgatgtccacggcccagacctacatgaat
gccgcgtccacgtacagcatgtcaccagcatacacgcagcaaacttccagtgcaatgggt
ttgggctccatggcttcagtgtgcaagacggaacccagctctcctcctccggccataacc
tctcattcccaacgtgcttgtttgggagacctgagggatatgataagcatgtacctgccc
cccggaggagacagcgccgaccacgccagcctacagagcagccggttacacagcgtccat
ccgcactatcaaagcgcagggactggcgtgaacggaacgctacccctaacccacatttga
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