Carassius gibelio (silver crucian carp): 127970906
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Entry
127970906 CDS
T08819
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04210
Apoptosis
cgib04218
Cellular senescence
cgib04620
Toll-like receptor signaling pathway
cgib04621
NOD-like receptor signaling pathway
cgib04622
RIG-I-like receptor signaling pathway
cgib04623
Cytosolic DNA-sensing pathway
cgib04625
C-type lectin receptor signaling pathway
cgib04920
Adipocytokine signaling pathway
cgib05132
Salmonella infection
cgib05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127970906
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127970906
04218 Cellular senescence
127970906
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127970906
04621 NOD-like receptor signaling pathway
127970906
04622 RIG-I-like receptor signaling pathway
127970906
04623 Cytosolic DNA-sensing pathway
127970906
04625 C-type lectin receptor signaling pathway
127970906
09152 Endocrine system
04920 Adipocytokine signaling pathway
127970906
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127970906
09171 Infectious disease: bacterial
05132 Salmonella infection
127970906
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127970906
Transcription factors [BR:
cgib03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
127970906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
127970906
NCBI-ProteinID:
XP_052429569
LinkDB
All DBs
Position
B14:13663924..13690712
Genome browser
AA seq
937 aa
AA seq
DB search
MAGEDSYHTEYMGQIDPFRDDSIWMTMDPTPFPGIHNNNVMRTAVDGPYLRIVEQPKQRG
FRFRYGCEGPSHGGLPGASSEKNRKSYPQVKICNYQGAARVVVQLVTNTVKPHLHAHSLV
GKQCDKGICIADLQPKDSSISFPNLGILHVTKKNVSKVLEERMIEAYRMGYNYGISIHPD
IDALQGEVRVPRELTDAERNLISGTSIHQSKEMDLSVVRLMFTAFLPDSDGGFSRRLEPV
ISDPIFDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYEDDESGLTW
EAYGDFSPTDVHRQFAIVFKTPKYRDQNLQKPISVFVQLKRKSDNETSEPKPFTYHPQII
DKEEVQRKRQKTLPNFQDYSGAGGGAGGMFRGGGGGSTAGGGPSGGGGGGHFFQGYQTYN
NFGSGYNFSSGMGGGGTTIKHAYQEPVEDSDEDSDSDNDDDPTAGGAVRICAQPEPVALG
EASEDTDPTEDLELDTTGCVIEPHLAALAERQAQALFHFAVSGDARMLLAPQRPLMTTQD
ENGDTGLHLGVIHSQTDAVRNLAQVISALPGEDVLNMRNDLYQTPLHLAVLTQQEEAVEA
LLEAEVDVTLTDRHGNTALHLAAQQKEDSVLRLLLKHKSVAQLTSMPNTAGLCPLHLAVQ
ANSLSCVRALLDAGADVEVQELTCGRTPLHLATELGNLSLAGCLLLEGNAFVDSVTYNGS
TPLHTAAGRASTKLCAILMAAGADPHKENFEPLFFKDDELCGTCEEEEEEDEGYIPGTTP
LNMATSAEVYDILNGEEYQPTTIFVPPQGDMKSLSSDTKQELCQALEEQTGGWESLAHAL
GLGILTSAFRLSSCPAGKLLDSYEVSGGTVRELVEGLKHVGNCSAVSLLQAVCKEPEAVH
TTPQLTGPGLCKSIQGLTLGSHQEESGICDSGVETSF
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggctggagaggattcataccatacagagtacatgggccaaatcgacccatttagagac
gactcaatatggatgactatggacccgacaccgtttccaggcatccacaacaataatgtt
atgaggacagcagtcgatggtccttatctacgaatcgtcgaacaaccaaagcagaggggc
ttcaggttccgctatggatgtgaaggcccctcccacggaggactcccaggggcctccagt
gagaagaacaggaagtcttacccacaagtgaagatatgtaactaccagggtgcagcgcga
gtggtagttcagctggtgaccaacactgtaaagccccatcttcatgctcacagcctggtg
ggcaaacagtgcgataaaggaatctgcatcgccgacttgcagcccaaagattcaagcatc
agttttcctaatttaggcattttgcatgtgacaaagaagaacgtgagcaaagttttggaa
gagaggatgatcgaggcctacaggatggggtataactacggtatatcgatccatcctgat
atagatgccctacaaggagaggttcgcgtgcccagagaactcacagatgctgaaaggaac
ctgatcagcggtacatctattcatcagtcgaaggagatggatctgagtgtggtacgactc
atgttcactgccttcctgcctgacagtgatggagggttctcccgcagactggaaccagtc
atttcagaccccatctttgacagcaaggccccgaatgcctccaatctgaagatagttcgg
atggatcggactgctggctgtgtgacgggaggagaggaggtctatctgctgtgtgacaaa
gtccagaaagatgatatccaggtgcggttttatgaagatgatgagtcaggtctaacctgg
gaggcctatggggatttctcccccactgacgtccacagacagttcgccattgtgttcaag
actcctaaatatcgggaccagaacctccagaagcccatctctgtgtttgtgcagctaaaa
agaaagtccgacaatgaaacgagtgaacccaagcctttcacctaccatccacagatcata
gacaaagaagaagtccagagaaagagacagaagactctgccaaacttccaggactacagt
ggagccggaggcggagctgggggcatgtttagaggaggagggggtgggtcaacagcaggg
ggaggtcccagcggaggaggaggaggaggacatttcttccagggatatcaaacctataac
aatttcgggtctggatacaacttctcctcaggcatgggaggaggcgggaccaccatcaag
catgcgtatcaagaaccagtggaggacagtgatgaggacagtgacagtgataacgatgac
gatccgacagcaggtggggcggtgcgaatctgtgcacaacctgaacctgtcgctttggga
gaggcaagtgaggacaccgatcctacagaagatctggagttagacaccacaggttgtgtg
atagagcctcatttggctgcgcttgctgaaagacaggctcaagcgttgtttcatttcgca
gtaagcggcgatgccagaatgcttctggctccacagcgccccctcatgaccacccaagac
gagaatggagacacgggtttacatctgggagtgatccatagtcagacagatgccgtgcga
aatctagcacaagtcatctcggctcttcccggagaggatgtacttaacatgaggaatgat
ctttatcagactcctttgcacctagctgtgttgacgcagcaagaagaggcagtcgaggcc
ttgttggaggccgaggtggatgtcacgctcacagatcgccatggaaacaccgcacttcac
ctggcggctcagcagaaagaggatagcgtgctgcgattgctgctgaagcacaaatcagtg
gcgcaattaaccagcatgcccaacacagcaggtctctgtccgcttcacctggctgtacag
gcaaacagtttgagctgtgtgcgggccctgctggatgccggggcagatgtggaggtccag
gagctcacatgtggccgcacgccacttcacctggccacagaactgggaaacctttccctc
gccgggtgcctgttgctggagggtaatgcatttgtagacagtgtcacctataacggttca
actcctctgcacactgctgcaggacgggcctcaaccaaactgtgcgcgatcctgatggct
gcaggagcagatcctcataaagaaaactttgaaccactcttcttcaaagatgatgagttg
tgtggtacatgtgaagaggaagaggaggaagatgaaggctatatccctgggacaacccct
ctgaacatggcaacctccgcagaggtttatgatattcttaatggagaagagtatcaaccc
accaccattttcgttccaccacaaggtgacatgaagagcttgagctctgacacaaagcag
gagttgtgccaggcactggaagaacagacgggaggctgggagagtctggctcatgctctg
gggcttggcatcctgaccagcgccttcagactcagctcctgccctgctggaaagctgctg
gacagctatgaggtgtccggaggaacggtgcgtgagctggtggagggactgaagcacgtt
gggaactgcagtgctgtcagtttactccaggccgtgtgtaaggagcctgaagctgtccac
accacgcctcagctcacaggtccagggctctgtaagtccattcagggtttgacactgggc
tcccatcaggaggagagcgggatatgtgacagcggggtggagacctctttctag
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