Carassius gibelio (silver crucian carp): 127970919
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Entry
127970919 CDS
T08819
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127970919
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127970919
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GFIT
Motif
Pfam:
LAMININ_IV_B
EGF_laminin
EGF_LMN_ATRN
Laminin_N
SR_plectin_7
Motif
Other DBs
NCBI-GeneID:
127970919
NCBI-ProteinID:
XP_052429592
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Position
A4:18710635..18735724
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AA seq
1139 aa
AA seq
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MNFSSTTALMMVLASLPPANSYLRHESRNCFANTKGRPASLSSSDQKRCLCCSGLRPTLW
RMAPTLPDLLKITNLRIRMEKLQTLDDDLFDEREGVKKKYYYALYDMVVRGNCFCYGHTS
KCAPVGDEPGVEGMVHSHCMCNHHTTGLNCQECEDFYQDLPWRPAVGRETNACKRCECNH
HSHSCHFDMAVYLSSGNRSGGVCDDCQHNTEGQWCENCKPFYYKHPGRDIRDPRICEPCD
CXPRGSLNGGLFDSATHVLRDMIAGQCRCXNVEGQHCDHCKKGHYGLSDDPLGCQPCSCN
PLGTFPKGSPCDIXTRSCYCKHLVTGLNCDLCLPQHWGLSNDMDGCRPCDCDVGGALNNN
CSWETGQCACKKHMFGRHCDQVHSGYYIPALDHYIYEVEEASFGPEVKVVQRALPLDRKP
TWTGNGFVNIAEGETLRLNIYNLPRSMEYNLMIHCEPLLPDEWEKVVVQIGCPRDTYPSA
HCTSTYRDEQTISLHPGSRYVVLPGPVCLEKGQNYTVKINFRQYSSYSYHTSPHTLVDSM
VLLPEVQDLNLFSGGAQQWENWEMFQKYRCMERTQGVIKIPLTDICKDFIFSVSALLHNG
ALECKCDPQGSLSTVCDNIGGQCQCQPNFIGRNCDTCAPDTYLFGPSGCRRCDCNPLGSQ
NPFCHPTTGQCLCVPGAYGHQCGNCKSGKLVTGECLNCRGHTTGHNCERCGGQHQRFGCV
SLIHVNKAVSDPKSTVEESAQIRKAAETKLESKEEEFNRTHQLHLQRLDKTGSEMDSIDL
SQLSHRLCGGASALDGCGNCGGLGCVSEDGMSQCGGEGCETIVTQIQETLNKVKNQDALH
AIGEISKLSKMVSDARGHADKAKLNAQDVLVRANQSKARVEQTNEELRDLIQQIRDFLTN
ETDPKRIEEVADEVMKLSLPVSVPGALKNVTTXIREHVARLTQVDDILAQTAENAHTAQR
LMQEAQAADERATALKQATDEVKETLEDTERAQTAASEKLKEVEKDINQTKHQIADVQSK
TEATEFKLSLSTRTLLDIEREEFDSLMQHEYKLASGVIDQKGAAVFNAHRKAEQLRQEAK
DLLKDATKKLERLSELEKSFVAYQRILVEKAQEMDGLESEARDVLQDLSQKITIYSTCA
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctccagcaccaccgcattgatgatggtcttggcgtcgctgcctccggccaac
agctacttgcggcacgagtcccggaactgctttgccaatacaaagggccggcccgcttcg
ctcagctccagtgaccagaagcgctgcctgtgttgttcggggctgaggccgaccctctgg
aggatggctccaaccctcccggacttactgaagatcacaaacttgcggatacggatggaa
aagttgcaaactttagatgatgatctgtttgatgagcgagagggggtgaaaaagaaatac
tattatgctctatacgacatggttgtccgtggaaactgtttctgctatggccacacctct
aagtgtgcgccagtcggcgatgagccaggggtcgagggcatggttcatagtcattgcatg
tgtaatcaccacaccactggactgaactgtcaagagtgtgaggacttttaccaagatctg
ccctggagaccagcagtgggccgagagacaaatgcttgcaagagatgtgagtgtaaccat
cactcgcattcctgtcatttcgacatggcggtgtatctgtcatcgggaaatagaagtgga
ggagtgtgtgatgactgtcagcacaacacagagggccagtggtgtgagaactgcaagccc
ttctactacaagcaccctggcagggacatcagagaccccaggatctgtgagccctgtgat
tgtngcccacgtggttctctgaacggaggcttatttgacagtgctacacatgttctaaga
gatatgattgccggacagtgtcgttgcnnaaatgtggagggacaacattgtgaccactgt
aaaaagggacactatggactcagtgacgacccattaggctgtcagccatgcagctgtaat
cctctaggtacattcccaaaaggaagcccctgtgatatanncacaagaagttgctactgc
aaacatcttgttaccggactaaactgtgacctgtgtctgccacagcactggggtctcagt
aatgatatggatggctgcagaccttgtgactgtgacgtaggtggggctttgaataataat
tgttcttgggagacagggcagtgtgcatgtaagaaacatatgtttggtaggcattgtgat
caggtgcattctgggtactacattccggcactggaccactatatttatgaagttgaggaa
gcttcgtttggaccagaagtaaaagtggttcaaagagcgttacctttggatcgtaaacct
acctggacgggtaatggatttgtgaatatagcagagggtgaaacactgaggttaaacatt
tacaatttaccacgatctatggaatacaacttaatgatccactgtgaaccactgttgcca
gatgaatgggagaaggttgtagtacagatagggtgccccagggacacttacccatcagca
cactgcacttctacatatagagatgagcagaccatctcactgcaccctggatccagatat
gtagttctgcctggtccagtgtgcttggagaagggtcagaattacacagtaaagattaac
ttccgccagtactcatcatacagctatcacacttctcctcacacacttgttgattcaatg
gtgcttttgccagaggtgcaagacctgaatctattttctggtggagcccagcagtgggaa
aactgggagatgttccagaaataccgatgtatggaacgcactcagggtgttattaaaatc
cccttaacggatatttgcaaagattttatcttcagtgtgtcggcactactgcacaatgga
gctcttgagtgtaagtgtgacccccaaggttctctgagcacagtgtgtgacaatatcggt
ggacagtgtcagtgtcaacccaattttataggtaggaactgtgacacctgtgccccggac
acctacctatttggaccctcaggatgtagacggtgtgactgtaacccacttggctctcag
aaccctttctgccaccccacgacgggccaatgtttatgtgtgccaggggcatatgggcac
caatgtggcaactgtaagtcgggcaaactggttacgggcgagtgtctgaactgcaggggt
cacaccacaggccacaactgtgagaggtgcggcggacagcatcagagatttggatgcgtg
tctctaattcatgtcaataaagctgtctctgacccaaaaagtacggttgaagaatctgct
cagatacggaaagctgctgagaccaaactagagagcaaagaggaagaatttaaccggacg
catcagctgcatttacagaggctggacaaaactggatctgaaatggactccatagacctt
tcacaactaagccatcggctgtgtggaggggcgtctgctctagatggttgcggaaactgt
ggtggtctgggatgtgtgagcgaggatggcatgtcccagtgtgggggggaaggatgtgag
accattgtgactcaaattcaagagaccttgaacaaagtcaaaaaccaagatgccctgcac
gctataggagaaataagcaagcttagcaagatggtgtcagatgctcgaggacatgcagat
aaggccaagcttaatgctcaggatgtgttagtgagagccaatcagagcaaggcacgagtg
gaacagaccaatgaggagctcagagacctcattcagcaaatacgagacttcctcacaaac
gaaactgatccaaagcgtatagaggaagtagctgatgaggtgatgaaactgagtttgcca
gtgtcagtgcctggtgctctgaagaacgtgaccacatagatccgcgagcatgtggccaga
ctgacacaggtggatgatattctggcccagacggcagagaacgcacacactgcacagaga
ctcatgcaagaagcacaggctgccgatgagagagctactgcactgaaacaggccactgat
gaggtgaaggaaactctagaggatactgagcgtgctcagactgctgccagcgaaaaactg
aaagaggtggagaaagacataaaccaaacaaaacatcaaatcgctgatgtacaatcaaaa
actgaagcgactgagttcaaactgagtttgagcacaagaacacttctggatattgagaga
gaggagtttgactcactcatgcaacatgagtacaaactggcgagtggtgtcatagatcag
aagggagcagctgtgtttaatgctcatcggaaagctgagcaactccgtcaggaggcaaag
gatctactgaaagatgccacaaagaaactagagagactgagtgagttggagaaatcattt
gtggcatatcagcgcattctggtggagaaagcacaagagatggatgggctggagagtgag
gccagagatgtactgcaagatctcagtcagaaaatcactatctacagcacctgcgcttaa
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