Carassius gibelio (silver crucian carp): 127970976
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Entry
127970976 CDS
T08819
Name
(RefSeq) transcriptional regulator ATRX-like isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127970976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127970976
03036 Chromosome and associated proteins [BR:
cgib03036
]
127970976
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
127970976
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
127970976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
SPT6_acidic
Motif
Other DBs
NCBI-GeneID:
127970976
NCBI-ProteinID:
XP_052429653
LinkDB
All DBs
Position
B14:5949750..5998941
Genome browser
AA seq
2042 aa
AA seq
DB search
MTTDICRSRKLNTLVTKLHEFLGHSPDDESIDSQDISNGKMAASDSSIPEERMSEPGCSS
EMTKASSSRSKRKPSFVTKHTAVDESECVSESAGEPVPDDGMQSSLDISTLPQGTVVVKP
EPVADEAKDEFRGPEFRSRGSKVKEDGTRKRPDEQLKEILNCTACGQQVNHFQRDSVFQH
PALHVLICKSCFKYYMSDDISKDEDGMDEQCRWCAEGGNLMCCDYCSNAFCKKCVLRNLG
RKELSEIMNEESKWHCYVCRPEPLQDFVKTCEKVLLNLESSYRKPKGDGDKTKRDDRKHK
HSKREKTAVNGQDYASDGAGPLSFSCKTLTVPKELVKKTKKLIETTNGLNRTFVQFLQHT
SKGSEVSAVSYRHLKAFKSVLADLKKAHSALEESLEEEFESKGLKFQNGEEQRPAQTDHT
VVNSHHADPAPVREDGLDCTKDQNPVVEEDENQQESNSADVEMKESLPPSPEEPQDQSEE
SEAQEQEIPDNPDFEDRSVPAGEASLDKDIVSVPTSVPEELFEMVESLAVKKEDRDNGNS
NATSNWKSTSNAEVVESNNSLTKLGRKLVVKLTPVPLKITIKRDKSKEQSPSEDLPKEAK
DSRRSSRMKTTPLRKSPEAKSKRKSRSSTAKEEPSAAVKEPCDSDSDEVPEVLQTAALKA
SSDESQPQDASGKGTKKKVASRSSERTKPKRKLDMVSSDSEQSGKSSAANKRRAKKKKDA
ESDSSNHNSDLEKQMKNLSKIETGKKTSRGVKKEESESSKEGKKGPKRSFERKRRSQREK
AKTKEELSSSDEEQEEEEQAANSDEDSDQQKIKPILESVMASIDGFHQSSEIRSNTGDEI
ELKAESSQVDDDDDPENRIAKRMLLAQIKANYSSGADSSSDDENADKEDGNSPKKGKDDA
KKQDESENEEEDETSDSGSDVEVKKGGRRHRLLSKKLTLSEGDSDDETTVKNKKDTKKRS
RQKVGSDDSGDSDFEQSRSSSSDASALSEDVSEDGDEDKGNKRKTRSSNKAAKDRERSYK
KEKKKRRRIKVQDSSSSGKSGGEEDGEDEGDEKGTPKNRKKIRKIIKDDKLRTETRDALK
EEEERRKRIAERERLREKLRETIVVEESSQVTCPITTKLVLDEDEETKEPLVQVHRNLVT
KLKPHQVDGVQFMWDCCCESVKKVEKSSGSGCILAHCMGLGKTLQVVTFLHTLLLCEKLN
FSTALVVCPLNTVLNWLNEFEKWQEGLKDEESLEVQELATVKRPQERAYALQRWQEDGGV
MIIGYEMYRNLTQGRNIKSKKLKEIFQKTLVDPGPDFVICDEGHVLKNEASAVSKAMNSI
QTRRRVVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTLTDVR
VMKKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLAIRLTPIQCKLYRYYLDHFTGVG
SALESGRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMEEFIASETEES
SMSLTSEDEKPKRKKKRGKGKEQSSDKSDSDDLEVIKEWNTSSRGGNPEGRNRAEPVEEV
RASNSGPGSPSPDWYKEFVAEADSEILEHSGKMVLLFEILRMAEELEEKVLVFSQSLISL
DLIEDFLELAGKAKEEGKLSPYKGEGKWFRNIDYYRLDGSTNAMTRKKWAEEFNDTSNVR
GRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQVRTVFVYRFLAQG
TMEEKIYDRQVAKQSLSFRVVDQQQIERHFTMNELTELYAFEPDQLDDPSEKKSKRATPM
LPKDPFLAELLHSYKDHIVGYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGLSMRFN
QPSYSQMGMGAGPNSYFPFNVAALASMSNQQLEDLINQGRQKAMEAANALKSVPREPLED
IIGQVWKENPSLPEAQVHSMALGRQAGYEMEMKHREAVYRDVLGKQQTLMMYVQKVIANR
KVQEQQMAMARQGMLLNQLAMQNGLTGPINQMDLLGLYQQLGALQGLPSSQLGKNPGPSK
GL
NT seq
6129 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgacatctgcaggtccaggaagttaaatacattggtgactaaacttcatgag
ttcttgggtcattctccggacgacgaaagcatcgattctcaagacatctccaatggtaaa
atggctgcgagtgactccagcatcccagaagagagaatgagtgagccgggttgctcctca
gaaatgaccaaagcctcatcttcacgctcaaagagaaaaccatcatttgtgaccaagcac
actgctgtagatgagtctgaatgtgtgagtgagagcgcaggagaacctgtcccagatgac
ggcatgcagagcagtctggatatcagcacgctgcctcaaggtacagtggtggtcaagcca
gaaccggtcgctgacgaagctaaagatgagttccgcggtccagagtttcgtagcagagga
agtaaagtgaaagaggatggtactcggaaacgtcccgacgagcagctcaaggagattctt
aattgcacagcatgtggacagcaagtcaatcactttcagagagattctgtctttcaacat
cccgcattacacgtccttatctgcaagtcatgtttcaaatattatatgagcgacgatatc
agcaaggatgaagatggaatggatgagcaatgcaggtggtgcgcagagggcggtaatctg
atgtgctgtgactactgcagcaatgccttctgcaaaaagtgcgttttgaggaacctggga
cgaaaagagctgtctgagatcatgaatgaagaaagcaaatggcactgctatgtgtgccgc
ccagagccgctgcaggactttgttaaaacctgtgagaaagtcttgctcaatctggaatcg
tcttatagaaagcccaagggagacggtgacaagacgaagcgtgacgatcgtaaacacaag
cacagcaagcgagaaaaaactgctgttaatggacaggattacgcctcagacggagcggga
ccgttatccttttcctgtaagaccttaacggttccgaaagagcttgtgaagaagaccaaa
aaactaatcgagaccacaaacggtttgaatcgtacttttgtacaattcctccagcacact
tcaaaaggcagtgaagtcagcgctgtgagttatagacacttaaaggccttcaaatcagtt
ttggccgatctgaaaaaggcccactcggctttggaggaatcactcgaagaagaatttgaa
tcgaaaggcctcaagtttcaaaacggagaggaacaaagaccagcacagaccgatcatacg
gttgttaactcgcaccacgctgaccctgctcctgtcagagaagatggattggattgcacc
aaggaccagaatcctgtggtagaggaggatgaaaaccagcaggagagtaactcagctgat
gttgaaatgaaggagagccttccaccctctccagaagaacctcaggaccagtctgaagaa
agtgaagctcaagagcaagaaataccagataaccctgactttgaggaccgctcggtgcca
gcaggtgaagcgtctcttgataaagacatcgtgtctgttccaacgtctgtcccagaggag
ctctttgagatggtcgagagtctcgcagtgaagaaagaagaccgtgacaatggcaactcg
aacgctaccagtaattggaaatcaacgtccaatgctgaggttgtggaatccaataacagc
cttacaaaactgggaagaaagctcgttgtcaaactaacacctgttcctcttaaaatcacc
ataaaacgagataagagcaaagaacagtcaccttctgaagacctgccaaaggaggctaaa
gatagccgacgctcctccaggatgaagaccacaccgctgcgtaagtcaccagaggcgaag
agcaaacgcaaatcgaggtcgtcaacagctaaagaagagcccagcgccgcagtgaaggag
ccgtgtgattcagactcagatgaagtccctgaagtcctgcagacggcggccttgaaggcc
agctcggatgagagccaaccccaggacgcttctggaaaaggaaccaaaaagaaggtagct
tcccgctcttctgagagaacgaagccaaagcgtaaactcgacatggtctcctcggattca
gaacagagcggcaagtcatcagcggcgaacaaacggagggccaaaaaaaagaaggacgca
gaatcagactcctccaaccacaactctgatcttgagaaacagatgaaaaacctgtccaag
atcgagactgggaaaaaaacatccagaggtgtcaaaaaggaagagagtgagtctagtaaa
gagggcaagaaaggccctaaaaggtcgttcgagaggaaacggaggtcacagagagaaaag
gctaaaaccaaggaggagttgtcctcgagtgatgaagagcaggaggaagaggagcaggct
gctaactcagacgaagacagcgatcagcagaagattaaaccaattcttgagtccgtgatg
gctagtattgatggtttccatcagtcatcagaaataaggtcaaatacaggtgatgaaatt
gaattgaaggctgagtcgtctcaggtggatgatgacgatgatccagagaatagaattgcc
aagaggatgcttctggcgcagatcaaagccaactattcgtctggagctgacagctcatct
gatgatgaaaacgcagacaaagaggacggcaattcaccaaagaaaggaaaagatgatgct
aagaagcaagacgaaagtgaaaacgaggaagaggatgagacttctgactcgggctcagat
gttgaggtgaagaaaggtggacgcagacaccgtttgctgagtaagaagttgactctaagc
gagggagactctgatgacgagactacagtcaaaaacaagaaagacaccaaaaagagaagc
aggcagaaagtgggcagcgatgactctggagactcggactttgagcagtcgcgctcgagc
tccagcgatgcatcagcgctcagtgaggatgtgagtgaagacggcgatgaagacaagggc
aacaaacgcaaaacacggtcgtccaataaagctgccaaggaccgagagagaagttacaag
aaagagaagaagaagcgccgtcgcattaaggttcaagactcctcgtccagtggcaagagc
ggaggagaagaggatggagaagatgaaggagatgagaaaggaacgcccaaaaatcgcaag
aagatccgcaagatcatcaaagatgacaaactgcggacggagacccgtgatgctctgaag
gaggaagaggagaggaggaagcgcattgctgagagagagcggctgagggagaaactacga
gagactatcgtggtggaggagtcatcgcaggtcacgtgtcccatcaccacgaagctggtg
ctggacgaggacgaggagaccaaggaaccgttagtgcaggttcacaggaacctggtgacc
aaactcaaaccccatcaggtggacggagtgcagttcatgtgggactgctgctgtgagtct
gtgaagaaggtggagaagtcttctggctccggctgtattctggcccactgcatggggctg
ggaaaaaccctccaggtggtgacgtttctccacactttgctgctgtgtgagaagctgaac
ttcagcactgctctggtggtgtgtcctctcaacacggtgctcaactggctcaacgagttt
gagaagtggcaagagggcctgaaggacgaggagagtttagaggtgcaggagctggccacg
gtgaagaggcctcaggagagagcatacgctttacagcgctggcaggaggatggcggcgtc
atgatcataggctacgagatgtaccgcaacctcacgcaaggacgaaacatcaagagcaag
aagctgaaggaaatctttcagaaaactctagtcgatccaggtccagattttgtcatctgt
gacgagggtcacgtgctgaagaacgaagcgtctgctgtctccaaagccatgaactccatc
cagactcgtcggagagtggtgctgacaggaacgcctctgcagaacaacctgatcgagtat
cactgtatggtgaacttcatcaaggagaacctgctgggatcagtgaaggagttcagaaac
cgcttcatcaaccccatccagaacggccagtgcgccgactccacgctcactgacgtccga
gtcatgaagaagcgcgcgcacatcctctacgagatgctggcgggctgcgtccagagaaga
gactacaccgcgctcaccaaattcctgccaccgaaacacgagtatgtgttagcgatacgg
ttaacacccattcagtgcaagctttaccgctactacctggatcacttcacaggtgtggga
tctgctttggagagtggacgaggccgcgccgggaccaaactcttccaggatttccagatg
ctcagcagaatctggacccatccgtggtgcctccagctggactatatcagtaaagaaaac
aagggatacttcgacgaggacagtatggaggagttcatagcctcagagacagaggagtcc
tccatgagtttgacctctgaagatgagaagcccaaaagaaagaagaagcgaggcaaaggg
aaagagcagagctcagacaagtccgacagcgatgacctggaagtgattaaggagtggaac
accagttctcgtggaggaaaccctgaggggcgcaacagagcagagcctgtggaggaggtt
cgggcgtcgaactcaggtcctggcagcccatcacctgactggtacaaagagtttgtggcc
gaggcagattctgaaatactggagcattctgggaaaatggtgcttctttttgagatcctc
cgcatggctgaagaattggaagaaaaagtgttggtgttcagccagtctctcatttctctg
gacctcattgaagatttcctggagttggcaggcaaagccaaagaggaagggaagctttcg
ccgtacaaaggtgagggcaagtggttcagaaacattgactactatcgtctagatggttca
acgaatgccatgaccaggaagaaatgggcagaggagttcaatgacaccagtaatgttcgg
ggtcgattgttcctcatctcaaccagagctggttctcttgggatcaacttggtagctgca
aacagggtcattattttcgacgcctcatggaacccatcctacgacattcagagtattttc
agagtctatcgctttggccaagtcaggactgtgtttgtctacaggtttttggctcaggga
accatggaggagaagatctatgaccggcaggtcgccaaacagtcgctgtccttcagagtt
gtggaccagcagcagattgaacgccactttaccatgaacgaactgacggagctctacgcg
tttgagcctgaccagctggacgacccctctgagaagaagagcaagcgggccactcccatg
ctgcccaaggatcctttcctggcagaactccttcacagttacaaagatcatatcgtcggc
taccacgagcacgactctttgctggaccacaaggaggaagaggcactgagtgaggaagat
cgcaaggcggcctgggccgaatacgaggccgaaaagaaggggctgtccatgcgtttcaac
cagccgtcctattctcagatgggcatgggagcaggaccaaactcttacttccccttcaac
gtggctgctttggcctccatgagcaaccaacagttggaggatttgattaaccagggccgg
cagaaagcgatggaagctgctaacgctctgaagtcagtgcccagggaacccctggaggat
atcatcgggcaggtgtggaaggagaacccgagtttacccgaggctcaggttcactccatg
gctcttgggaggcaggccggctacgagatggaaatgaaacacagggaggctgtttaccgt
gatgtcctcggcaagcaacaaactctgatgatgtacgtgcagaaggtgatcgccaaccgt
aaggtgcaggagcagcagatggccatggcaaggcagggtatgctgctcaaccagctggcc
atgcagaacggtcttactggccccataaatcagatggatctgctggggttgtaccagcag
ctcggggcgctccagggcctcccctcctcacagctgggcaagaacccgggcccgtctaag
ggcctgtag
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integrated database retrieval system
