Carassius gibelio (silver crucian carp): 127970977
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Entry
127970977 CDS
T08819
Name
(RefSeq) THO complex subunit 2-like isoform X1
KO
K12879
THO complex subunit 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127970977
09122 Translation
03013 Nucleocytoplasmic transport
127970977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127970977
03041 Spliceosome [BR:
cgib03041
]
127970977
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
127970977
Spliceosome [BR:
cgib03041
]
Complex C
Other components
EJC/TREX
127970977
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
127970977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
127970977
NCBI-ProteinID:
XP_052429659
LinkDB
All DBs
Position
B14:complement(5778569..5842720)
Genome browser
AA seq
1559 aa
AA seq
DB search
MCARRKMATLILPSDWIKNWDKYGKNELFQFFQDLAGKPSNPQVVKDLQTGLYELCWHVI
QGSLKVDVAASVLTDVMELRDDMASVLADVFCILDIETGCLEEKHKRDHFTQLVGACLVC
VPDGMLKERLDPETLESLGLIKQAQQFNQKIVKIKTKLFYKQQKFNLLREENEGYAKLIT
ELGQDLSGNLSSHLVLENIKSLIGCFNLDPNRVLDIILEVYECRSEHDEFFIPLIKSYMC
EHQTLCHMLGFKFKFHQEPNGETPSSLYHIAAALLQHNLIALEDLYVHLLPLDSSIVEEH
KREILEAKQIARKLTMVLVPSEKTEDKEKEKEKEEEKNEKPPDNQKLGLLEALLRIGDWQ
HAQSIMDQMPAFYATSHKAIAVALCQLLHLIVEPLYRRAAVPKGAKGSLTMPLWSKHALR
PAESFGDLSRGVFTMLCYLGPHLSHDPVLFAKVVRLGKSFMKEYQSESRQDTKDKMDSLL
SCFLSIADQVLLPSLSLMECNACMSEELWGFFKLFPYQHRYRLYGQWKNETYGHHPLLVK
IKAQTVDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQWYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKEKMKHDDTTISSWLQSLASLCGSVFRKYPIELAGL
LQYVTNQLKAGKSFDLLILKEVVQKMAGIEITDEMTVEQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHELALPLCLLMAQQRNGVVFSEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTEDYIKRVPSIDVLCNQFHTPHDAAFFLSRPMYAHQILSKYDELKKAEKGN
RQQQKVHKYIAACEQIMAPVHEAVVSLHLPKVWDDLRPQFYATFWSLTMYDLAVPHNAYD
REVNKLKMQIKAIDENTEMPLNKKKKEKERCTALQDKLQEEEKKQLEHVQRVLHRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCVFSAIDAVYCARFVELVHQQKTPNFCTLLCYDRV
FSDIIYTVASCTENESRRYGRFLCCMLETVTRWHSDRAVYEKECGNYPGFLTIFRASGFD
GGNKADQLDYENFRHVAHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALECRVHKICQEEKEKRPDLYALAMGYSGQLKGRKVHMVPENEFHHKEQPVRSATPGT
LQNGPGNTGKPAVTANTSAGKAEEGAVEDSDKSKDKSQAVQKTASKNSTTANKVNSSNGS
STPNSTKGSKEKEDKEKTTKEKKEKKDKNPGSTPEAKAGGKDKQKEEKPTDSKEKTPKAD
KDKRKDDKKEEKSKIDGKSAEKEWSKERDVSNDSKTKEGSKVEKSAGTGSMKSLVPRSEG
VESERAEQKRRKLDTHSSPSHSSAVKDNLNDFKDSASKHHPNHSTVLSKSKEKDDEKKES
DKSRDRSKEREKKEERKDRKRDYLNSEREMSQEAKRRKDENGMNSSRHSKSSSPSESPHS
NDKDKDSSKRSKDKSDPAKPEKTSGGKKESRHDKEKSEKKRDSTGAKEEKKHHKSEKHR
NT seq
4680 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgcgaggaggaagatggcgacgctgatcctcccgtctgactggataaaaaactgg
gacaaatatggcaaaaatgagcttttccagtttttccaggacctcgcagggaaacccagc
aatcctcaggttgttaaagatctgcagacaggcctgtacgagctctgctggcatgtaatc
cagggcagtctgaaggtggatgtggctgccagtgtcctgactgatgtaatggagctgcgg
gacgatatggcttctgttttagctgatgtgttctgtatattagatatcgagacgggctgt
ttggaggagaaacacaagcgagatcatttcacccagctggtcggagcctgtttggtctgt
gttcctgacggtatgctgaaggagagattggatccagaaacgctggagtctctggggctg
atcaaacaggctcagcagttcaaccagaagattgtcaaaatcaagaccaaactattttac
aaacagcagaagttcaatttgttgcgcgaggagaatgaaggctacgctaagctgatcacg
gagcttgggcaggatctgtcggggaatctcagcagccacctcgtcctggagaacatcaag
tcattaatcggatgcttcaatctggacccaaaccgtgtgctggacatcatcttggaggtg
tacgagtgtcgctctgaacacgatgagttcttcatccctcttatcaagtcctacatgtgc
gagcaccagaccctctgccacatgctgggcttcaagttcaagtttcaccaggagcctaat
ggagaaacgccatcatctctgtaccacatcgctgcagctcttcttcaacacaacctcatc
gctcttgaagatctctacgttcatctcctcccgttagattccagcatcgtggaagagcac
aagagagagatcctggaggccaaacagatcgcccgtaaactcaccatggtgctcgtgccc
tccgaaaagacagaggacaaggagaaggaaaaggagaaggaagaggaaaagaatgagaag
cctcctgataaccagaagctggggctgctggaggcgctgctgaggatcggtgactggcag
cacgctcagagcatcatggatcagatgccagctttctacgccacctcccacaaggccatc
gccgtggcactgtgccagctgctgcacctgatcgtggagccgctctaccgcagggctgca
gtccccaaaggtgccaaaggaagtttgacgatgcctctgtggagcaaacatgcactgcgt
ccagccgaaagctttggcgatctctccaggggcgtcttcaccatgctgtgctacctgggc
cctcacctgtcccacgaccccgtcctgtttgccaaggtcgtgcgactgggcaagagtttc
atgaaagagtaccaaagtgaaagcaggcaagacaccaaggacaaaatggactctctgctg
agctgttttctcagtattgctgatcaggtgttgttgccgtctctctcgctcatggagtgt
aacgcctgcatgtctgaggagctctggggcttcttcaaactcttcccctaccagcacagg
tatcgcctctatgggcagtggaagaatgagacgtacggccatcatccactcctggtgaag
atcaaggctcagacggtagaccgagccaaatacatcatgaagcgactgactaaggagaac
gtgaagccctcaggaaggcagattggaaagttgagccacagtaaccccaccattctcttt
gattatatcctgtctcagatccagtggtacgataacctcataactccagtggtggactct
ctcaaatacctcacgtccctcaactatgatgtgctggcctattgcattattgaagcttta
gccaacccagagaaagagaagatgaagcacgatgacaccaccatttcatcatggctgcag
agtctcgctagtttgtgtggatcggttttcaggaaatatcccatcgagttagctggtctt
ctgcagtatgtgaccaaccagctgaaagctggaaagagttttgacctgctgatcctgaag
gaggtggtgcagaagatggcagggatcgagatcacggatgaaatgactgtggagcagctg
gaggccatgacgggtggagagcagctcaaagcagagggtggctactttggacagatcagg
aacactaagaagtcgtctcagcgcctgaaggacgctcttctggaccacgagctggcgtta
ccgctgtgtctcctgatggcccagcagaggaacggggtggtcttctctgaggggggagag
aagcaccttaaactcgtggggaagctgtacgatcagtgtcacgacactctcgtacagttt
ggtggcttcttggcgtctaacctcagcacagaagactacatcaaaagggtgccgtcaatc
gatgtcctctgcaaccagttccacacgccacacgatgctgctttcttcctctctcggccc
atgtatgcccatcagattctgtccaagtacgacgagttgaagaaggcagagaagggcaac
cggcagcagcagaaggtccataagtacatcgcggcctgcgagcagatcatggccccggtg
cacgaggctgtcgtgtctcttcacttgcccaaagtgtgggatgaccttcgacctcagttc
tacgccaccttctggtccctcaccatgtacgacctggcggtgccgcacaacgcctacgac
cgcgaggtcaacaagctgaagatgcagatcaaggccatcgatgaaaacacagagatgcct
ctgaacaaaaagaagaaagagaaggagcgctgcacagcgctgcaggacaagctgcaggaa
gaggagaagaagcagctggagcatgttcagagagtcctgcaccgtctcaaactggagaaa
gacaactggctgctcgccaaatccactaagaatgaaaccatcaccaagttcctgcagctc
tgtatcttcccccgctgcgtcttctcagccatcgatgccgtttactgcgctcgcttcgtg
gagctggtgcaccagcagaagacgcccaacttctgcaccctgctctgctacgaccgagtg
ttctctgatatcatctacacggtggcgagctgcacagagaacgagtcgcgccgctacggc
cgcttcctgtgctgcatgctggagacggtgacgcggtggcacagcgacagagccgtctat
gagaaggaatgtggcaattatcctgggttcctgactattttccgagccagtggttttgac
ggagggaacaaagccgatcagctggactatgagaatttccggcatgttgcccacaagtgg
cattacaagttgactaaagcgtcggttcactgtctggagacgggcgagtacacccacatc
cgtaacatcctgatcgtgctcaccaagatcctgccctggtaccccaaggtgctgaacctg
ggccaggctctggagtgccgcgttcacaagatctgccaggaggagaaagagaagaggccc
gatctctatgcgttagccatgggctactctggccaattgaaaggcaggaaagtgcacatg
gtgccagaaaatgagttccaccataaggagcagccagtgcgcagcgccacgcctggcact
ctgcagaacggaccgggcaacacgggcaagcctgcggtcaccgccaacaccagcgctggc
aaagccgaggagggcgccgtcgaggactcagataaatccaaggacaaatctcaggcggtt
cagaaaactgccagcaaaaacagcaccacagccaataaagtgaacagcagcaacggaagc
agcacgccaaacagcactaaagggagtaaagagaaggaagataaagagaagaccacaaaa
gagaaaaaggagaagaaagacaagaacccaggaagcactccagaggccaaggcaggaggg
aaggacaaacagaaggaggagaagcccactgacagcaaggagaagacgcccaaggctgac
aaggacaagaggaaggatgacaagaaggaagagaagagcaagatcgatgggaaatccgcc
gaaaaagagtggtccaaggagcgcgatgtgtccaacgacagcaagactaaggaaggcagc
aaagtggagaagagcgctgggacgggaagcatgaagtccctcgtgcccagatccgaagga
gtcgagtctgaacgggcagagcaaaaaagacgaaaacttgatacacactcgtcaccatcg
cactcctctgcagttaaggacaatctcaacgacttcaaggactctgcatcaaagcaccat
cctaaccacagcacagtcctgtccaagagcaaagagaaggacgacgagaagaaagagtct
gacaaatccagggaccgctccaaagagagggagaagaaggaagagcggaaggaccggaaa
cgagactacttgaacagtgagcgcgagatgagccaggaagccaagcgccgcaaagatgaa
aatggaatgaactcctccagacacagcaagagctccagcccctccgaatcaccacactcc
aacgacaaggacaaggacagcagcaagcgctccaaggacaagagcgatccggccaaacct
gagaagacctctggaggcaaaaaggaatccaggcacgacaaagagaaatcagaaaagaag
agagacagcactggcgctaaagaagagaagaaacaccataaatcagagaaacacagatag
DBGET
integrated database retrieval system
