Carassius gibelio (silver crucian carp): 127971083 Help Entry 127971083         CDS       T08819                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism cgib  Carassius gibelio (silver crucian carp) Pathway cgib03040   Spliceosome cgib04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:cgib00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     127971083   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     127971083  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:cgib03041]     127971083    04121 Ubiquitin system [BR:cgib04121]     127971083    03400 DNA repair and recombination proteins [BR:cgib03400]     127971083 Enzymes [BR:cgib01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      127971083 Spliceosome [BR:cgib03041]  Complex B   Other components    Prp19 complex     127971083  Complex C    Prp19-CDC5 complex     127971083 Ubiquitin system [BR:cgib04121]  Ubiquitin ligases (E3)   U-box type E3    127971083 DNA repair and recombination proteins [BR:cgib03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     127971083 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Prp19 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_IFT122_1st WDR90_beta-prop_4th PEP5_VPS11_N Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_Vps41 Beta-prop_DCAF4 U-box WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N PROPPIN Ge1_WD40 Beta-prop_DCAF12 eIF2A B-prop_COPA_B_2nd Cytochrom_D1 ATG16 Cep57_MT_bd Motif Other DBs NCBI-GeneID:  127971083 NCBI-ProteinID:  XP_052429798 LinkDB All DBs Position B14:4731157..4736936 Genome browser AA seq 505 aa AA seqDB search MSLVCAISNEVPEHPCVSPVSSQVFERRLIEKYIAENGVDPINGQPLSEEQLIDIKVSHP IRPKAPSATSIPAILKSLQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGLIAPQATPASQPAAVGAGGEAMEISEQVGMTPEIIQKLQDK ATVLTTERKKRGKTVPEELVRAEDLGKYRQVASHAGLHSASIPGIISLDLCPTDTNKVLT GGADKNVVVFDRREEQIVATLKGHTKKVSSVIYHPAQSVVFSASPDSTIRVWSVSGGNCV QVIRAHEASVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDETAGCALTCAQFH PDGLIFGTGTADSQIKIWDLKERTNVANFPGHSGPVTSIAFSENGYYLATGAQDSSLKLW DLRKLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGSDIRVYICKQWSEVLNFPDHSGLVT GVAFGEHAQFLASTGMDRSLKFYSL NT seq 1518 nt NT seq  +upstreamnt  +downstreamnt atgtctctggtttgtgctatttctaacgaggtgccggagcacccctgtgtctctcctgtg tccagtcaagtgtttgagaggcgtctgatcgagaagtacatcgcagagaatggagtggac cccatcaatggccagcctctgtccgaggagcagctcatcgatatcaaggtgtctcacccc attcgaccaaaggctccctcggccaccagtattcctgcgatcctcaaatctctgcaggac gagtgggatgccgtgatgctgcacagcttcactctgaggcagcagctgcagacgactcga caggagctgtctcacgctctctaccagcacgacgctgcctgcagagtcatcgctcgactc acgaaagaggtcactgctgccagagaggctctggctacactcaaacctcaagctggactg atcgctcctcaagccactcctgcttctcagcctgcagctgtgggtgctggtggtgaggct atggagatcagtgagcaggtcggaatgactccagagatcatacagaagctccaagacaag gctaccgtcttaaccaccgaaagaaagaagagaggaaagactgtgccggaggagctggtc agagcagaagatctcggcaagtaccgccaagtggcctctcatgctggtcttcacagtgcc agtatcccaggaatcatctctctggatctctgcccaacagacaccaacaaagtcctcacc ggtggtgctgataagaacgtggtggtgttcgaccgtcgggaggagcagattgttgccacc ctcaaagggcacaccaaaaaggtgtcgtctgtcatctaccaccctgctcagtcggtggtg ttctcggcgtctccagacagcaccatccgtgtgtggtctgtgagcggaggcaactgtgtg caggtgatcagggcccacgaggccagtgtgaccggcctgtctctgcacgctacaggagac tacctgctgagctcttctgaggaccagtactgggccttctcagatatccagactggacgt gtcctgactaaagtgacggatgagaccgctggatgtgctctgacctgtgctcagttccat ccggacggtctgattttcggcaccggcacggcagattctcagattaagatctgggatctg aaggaacggaccaatgtagccaacttccccggacattcaggtcctgtgacgtccatcgcc ttctccgagaatggatactatctggccactggtgctcaggacagctcactcaagctgtgg gatctgaggaagctgaagaacttcaagactatcactttggacaacaattatgaggtgaag tctttggtcttcgaccagagcgggacatatctggctgttggtggatcagacatcagagtt tatatctgcaaacagtggtctgaggtgctcaacttccctgatcactctgggctggtgacc ggtgtggccttcggggaacatgctcagttcctggcgtccactggcatggacagaagcctc aaattctacagcctttaa

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