Carassius gibelio (silver crucian carp): 127971144
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Entry
127971144 CDS
T08819
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
127971144
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
127971144
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127971144
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127971144
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Protocadherins
127971144
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_pro
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
127971144
NCBI-ProteinID:
XP_052429916
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All DBs
Position
B14:complement(5176292..5180786)
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AA seq
831 aa
AA seq
DB search
MKWTTLQWVLLLASAWQTHSRALRFTAVEEQEAGVKIGSLSTNYSPPYRLLEETYIRVDE
STGDLFTTERIDRETLCPSHQDGDCTFSNTAVVSLNFEVVPMIITVDDINDNAPIFERNE
IPLHIPEDASNGTAFPLDDQAQDKDTGDNGVIRYYLEDPGGFFSIRQDGHELELVVQREL
DRETQENHLLVLVAVDGGTVPLSSTVNLNVTVTDVDDNCPEFDADSPITAIVPALGVKGT
AVGQLKATDKDLGLNAQIAFSFSRLMSDRAKALFHLDGHTGLISLAVDMQVDSPEEHALK
VFANSPLCPPVQTQVTVYMQPAMSQELTVKIKFVAEHKNQVIMLRENEPPTVLALLELED
TSTAKGTLSLDKDSMPFSLKPQAGSYLLSTSEPLNFEMRGEYEVTLIISDPHGTRLHRRE
VIKVLVEDVNDNAPKFEQTRYEKDIKENNEPGVFLLRVQASDADSQQFGKVRYRLTNGGP
FRIDEESGVISVVETLDREQQETYVLTVVARDGGDPSQEGAAIVSVNILDLNDNPPAFPT
PHFYFFVSENIPQLSQVGKVTASDSDEGENGRIVDVRILNDSVPFAIDMAQGSLRSIAEV
DREKQDRFELLVVAVDGGSPVLSATAKMTIFIEDVNDNQPQVLRPSSNLSCLTISPATRA
GSMITKIYAIDEDSGMNSDITYQIIASKPALHSPFQIDQHSGNITLVQHLRGEDYGMHHL
FIVVRDGGKPDPLQTTVWVNLQVNETLETCHVNAVPEYTPPRLPPPMPVIDRRCESNAWL
VLYCGLCLMVISVCVLLAVVVVFMKHRTIKRKVEQKNVWETGNLCELKHLN
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgaagtggactacactacagtgggtgcttctcctggcatctgcttggcaaacccatagc
cgtgctctccgtttcaccgccgtggaggagcaagaagcaggcgttaagatcggaagtcta
agcacaaactactcacctccataccggctcctcgaggaaacatacatccgggtggatgag
agcacaggggatctgttcactacagagcgcatagacagagagaccttgtgtccatcacat
caggatggagactgtaccttttcaaataccgcagtcgttagtcttaattttgaagtcgtg
ccaatgatcatcactgtggatgatattaatgacaacgctcctattttcgagaggaatgag
attcctctacacatacctgaagatgcgtcaaacgggaccgctttcccactggatgaccaa
gcccaggataaggatacgggcgataatggcgtgatacgttactatttggaagaccctggt
ggcttttttagcatcagacaagacgggcatgaactggagctggtggtacaaagggaacta
gaccgggaaactcaggaaaaccacctcttggttcttgtagctgtagatggaggtacagta
ccactcagctctacagttaatctcaatgtaactgtaaccgatgttgatgacaattgcccg
gagtttgacgccgacagtcccatcacagccattgtgccagcgttaggagtcaagggcact
gcggtgggccagcttaaagccacagacaaagacctgggcctaaatgcccagattgcattt
tcattcagccgtctgatgtcagacagggccaaagcgctctttcacttggatggacacaca
ggcctgatcagcttagctgttgacatgcaggttgacagtcctgaagagcatgcattgaaa
gtctttgcgaatagcccactctgcccccctgtgcaaactcaggtaaccgtatacatgcag
ccagcgatgagccaagagctgaccgtaaagatcaagtttgtcgccgagcataaaaaccaa
gtgatcatgttacgagaaaacgagccccccaccgtcttggcgctcttggagctggaagac
acctctactgccaaaggtactctgtccttagataaagacagcatgccgttttctttgaag
ccgcaagcaggcagctatttgctttcaacatcagaacccctcaattttgagatgcgcggc
gagtatgaggttacacttattatttctgatcctcatggcacacgcctgcacagaagggaa
gtgatcaaagtgctggttgaagatgtgaatgataatgccccaaagtttgaacaaacacgt
tatgaaaaggacatcaaggagaacaacgagcctggagtgtttctgctgagagtccaggct
agcgacgcagacagccagcagttcggcaaagtaaggtataggcttacaaatggaggacct
ttcagaattgacgaagagtcgggtgtgatatcggtggtggagactttggatagagaacag
caggagacgtacgtcctgaccgttgtggcacgagacggaggagatccgtctcaggagggt
gctgctattgtgtctgtaaacatactggatctgaatgataatccaccagcctttcctacc
ccacatttctatttctttgtgtctgagaacattccacaactttcccaagttgggaaagtc
acagcaagtgatagcgatgaaggagaaaatggccggatagtggatgtgcgtattttaaac
gacagtgtcccttttgccatagacatggcgcagggatcgctccgcagtattgctgaagtc
gaccgcgagaagcaagaccgctttgagcttctggttgtagctgtagacggcggcagtccg
gtcctttccgctacagcaaaaatgaccatttttattgaggatgtcaatgataatcaaccc
caggtccttcgtcctagcagcaacctctcctgtttgaccatatccccggctactcgagca
ggaagcatgataacaaagatttacgccatcgatgaggactcaggaatgaattcggatatc
acttaccaaattattgcatccaagccggctctccacagtcccttccagattgaccagcac
tcaggaaacatcactctggtccagcacctgcgcggcgaggactacggcatgcaccacctc
ttcatagtcgtccgtgatggaggaaagccagaccccctgcagaccaccgtgtgggtcaac
ctgcaggtcaacgagacgttggaaacatgtcacgtgaatgccgttccagagtacacacca
ccacgactgcctcctccgatgcctgtcatagaccgcaggtgtgaatcaaatgcatggctt
gttttatattgtggcctgtgtctgatggtcatctcagtctgtgttctcctggcggtcgta
gtggtgttcatgaagcacagaacgattaaaaggaaagtcgaacaaaagaacgtttgggaa
actggaaatctctgtgaactgaaacatttgaactaa
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