Carassius gibelio (silver crucian carp): 127971316
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Entry
127971316 CDS
T08819
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127971316
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
127971316
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
Ig_3
I-set
ig
Ig_2
V-set
LRR_9
LRRNT
LRR_RPS2
C2-set_2
C2-set_3
DUF7617
Ig_6
Motif
Other DBs
NCBI-GeneID:
127971316
NCBI-ProteinID:
XP_052430174
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Position
B14:27612680..27938733
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AA seq
615 aa
AA seq
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MVDCLSRVMLHTAVSCWQPLLGLALVAVFVGSTLACPARCECSAQSRSVICHRKRYNAIP
DGVPTETRILDLSKNRIPAVNPDDFSVYPHIEELDLSGNIIAYVEPGAFNSLYSLHTLSL
KSNRIKLLSLGVFSGLSNLTNLDISDNKVVILVDYMFQDLRNLRSLEVGDNELVYISHRA
FSGLLSLESLTLERCNLTVVPTDALSHLHNLVSLHMRYLSISSLHPYSFKKLFHLRHLVI
DNWPSLDLIPANTLHGLNLTTLSITNTNLSTFPYQALRHLHYLTHLNLSYSRIRVVEGGL
LQDLVRLRELRLAGSQLVSIEPYAFQGIRWLRSLNVSQNRLDTLERGVFHAPEALEVLLI
NNNPLVCDCRLMWLLQRRHSISFGDTQPECSTPEGIHGRPFKEFKETLLSYYVTCTKPKI
RENRTQMVSVEEGQSARLHCSAEGSPRPTISWVTPRRRHLTNRSHGRVIVHNNGSLDIKA
AEVQDDGVYMCVASNTAGNDTLMVSLAVKSLGSLYANRTQHYTDTSNATANGTNLPNVTF
GLDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYVPRSKSNGTSAEE
ADQGAGPRRFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtggactgtttgagtcgagtcatgctgcacacagccgtgtcttgctggcagcctttg
ctggggctggccctggtggccgtgttcgtgggctccactcttgcctgccccgctcgctgc
gagtgctccgcccagagccgctctgtcatctgccaccgtaagcgctacaacgcaatccct
gatggagtcccaactgagacacgaatccttgatctcagcaagaatcgtattccagccgtc
aatcctgatgacttttcggtctatccacacatagaagaactggacctgagtgggaacatc
attgcttatgttgagcccggagccttcaactcgctctacagcctccacacactaagctta
aagagcaaccgtatcaagctcctctctctaggcgtcttctccggcctctccaacctgaca
aacctggatatcagtgacaacaaagttgtcattctggtggactatatgttccaggacctg
cgcaacctcaggtcattagaagttggagacaatgagctggtttacatctcccatcgggcc
ttcagtggactactgtcactggagagcctgacgctggagcgctgtaacttgacggtggtg
cccacagatgccctgtcccacctgcacaacctggtgagcctacatatgcgctacctcagt
atcagctctctacatccctactccttcaagaagctcttccacctccgtcatctagtgatc
gacaactggccatcgttagatttgatccctgctaatactctgcatggcctcaacctcacc
acgctttctattaccaacaccaacctatccactttcccttaccaggctcttcgccacctc
cattacctcacacaccttaacctctcctacagtcgtatccgggtggtggagggtggcctg
cttcaggacctggtgcgattgcgtgagctgaggttggctgggtctcaactggtgtctatc
gaaccctacgctttccaagggatccgctggctccgttcgctaaatgtctcccaaaaccgc
cttgataccctggagaggggtgtattccatgctcctgaggccctagaggtgctgttgatc
aacaacaatcctctggtttgcgattgccgactcatgtggttgctgcaaaggcgccattcc
atttcttttggtgacacccagcccgagtgcagcactccggaaggaattcacggacgcccc
ttcaaggagttcaaagagaccctgctatcctactatgtgacctgcaccaagccgaaaatc
agagaaaaccgaactcagatggtgtcggtggaggagggacagtcagcccgtttacactgc
agcgctgaggggtccccacggcccactatttcctgggtcaccccacgccggaggcacctg
accaacaggagccatggcagggtgatagtccacaacaacggttcattggatatcaaggcg
gcggaggttcaggatgacggtgtgtatatgtgtgtggcctctaacacggcaggcaatgac
actcttatggtatcactggcagtgaaaagtctgggctcgctgtatgccaacaggacccag
cattacacagatacaagcaatgccactgccaatggtaccaacctccccaatgtgaccttt
ggccttgacctaaagactatcttagtttctacagccatgggctgtttcacattcctagga
gtggttctcttctgcttcctgctcctgtttgtatggagtcgaggaaaaggcaaacataaa
aacaacattgatattgagtacgtgccacgctcaaagtccaatgggacctctgccgaggag
gcggaccagggtgctgggccacgtcgctttaacatgaaaatgatttaa
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