Carassius gibelio (silver crucian carp): 127971332
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Entry
127971332 CDS
T08819
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib02010
ABC transporters
cgib04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
127971332
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127971332
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgib02000
]
127971332
Transporters [BR:
cgib02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
127971332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
MukB
AAA_23
Motif
Other DBs
NCBI-GeneID:
127971332
NCBI-ProteinID:
XP_052430195
LinkDB
All DBs
Position
B14:complement(12884918..12916672)
Genome browser
AA seq
2280 aa
AA seq
DB search
MSISTQLGLLLWKNFTYRRRQTLQLLTEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGIVCNANNPCFRHPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDK
SLDGFKELIRAVKVMQNNTAGFKLKDFLGENETLSMFLQQNASFSHNQVQNILEADVNLE
KVLIKGFGVHLRDMCSTTTLEDFVSIPDERVARFTQELICSAPKSWLDQAEGHFKSNLDF
LKPIKSEIRTNATDVRLVAKATDNLLESLGSLAVELASMRSWSDLRNEILFLSENATGSP
SLMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNFQALFGNHNESDDEPVSVYDNTTTPYCN
NLMKNMEASPISRMIWRALKPLLMGKILYTPHSPATQKIIHEVNKTFQELGVLRDLGGMW
EEARPKVWNFMENSEEMDLMRILLRNNATASFFSAQLAGTQWSVEDVISFLSKHSEDTRP
HGTAFTWRDVFNETDQAIMSISRFMECVNLDKLEPVSTEEKMVNESMILLDNRKFWAGIV
FLDIQSNSSELPQHVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYIWGGFTYLQ
DIVEHSIIRAVTGTKEKTGVYIQQMPYPCYVDDIFLRIMSRSMPLFMTLAWMYSVAIIIK
GVVYEKEARLKETMRIMGLDNGILWLSWFISSFIPLLISAGLLVLLLKMGNLLPYSDPGV
VFLFLVSFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYVGFSAKV
IASLLSPVAFGFGCEYFALFEEQGVGIQWNNLFSSPMEEDNYNLTTCLILMYFDAFLYGV
MTWYIEAVFPGQYGIPRPWYFPFSKSYWFGESNTKNTAVHGKKGNAGAVCIEEEPTHLEL
GVYIKNLVKVYRHGKKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTA
YIMGKDIRSELSSIRRSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEDVKAETEQILT
DTGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLKY
RTGRTILLSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKNTEPS
LSSCRNSSSTVSFVKKDDNASESSSDAGLGSDQESEAATAIGTTWPESPVVPVDVDLISS
LILKHVPASRMVEDLGHEITYVLPYESAKDGAFVELFHDLDDRLADLGISSYGISDTTLE
EIFLKVAEDSGVDAEIISDGTVPVPRHRRHAFGADHQSCLKPLTEDDDSNDSDVDPESKE
TDYLSVSNGKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVF
SLIVPPFGKYPSLALNPWMYEEQFTFISDDAPHDISTQKLLSALLDDPGFGTRCMEGEPI
PDAPCTMGDEEWSTQEVSESVMEIFTSTNWTMDNPSPACECSCNGKKKMLPECPAGAGGL
PPPQIKMSETETLQNLTGRNISDYLVKTYAQIIGKSLKNKIWVNEFRYGGFSLGARSTQV
LPPAEEIDDAISRVREIFQLGKDSGSAADRFLKSLSGFINGLDTKNNVKIWFNNKGWHSI
GAFLNVMNNGILRANLQPGRDPHQFGITAFNHPLNLTKEQLSQVALMTTSVDVLVSICVI
FAMSFVPASFVVFLIQERVNKAKHMQFISGVQPYLYWLANFLWDMCNYVVPATLVILIFV
CFQQKAYVSATNLPVLALLLLLYGWSITPLMYPASFLFKIPSTAYVVLTSVNILIGINGS
VSTFVMDLFGSNEVGGLNDILKNVLLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRS
PLEWDMVGKNLFAMAVEGLVFFIITVLIQYRFFFKPKSLSAKLTPIGEEDEDVARERQRI
MSGAGQGDILELRQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGD
SVVTKGEAFLAGKSILREIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPENQVC
EVAEWGIRKLGLVKYVDKKAGSYSGGNMRKLSTAISLIGAPPVVFLDEPTTGMDPKARRA
LWNCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTII
LKVAGPDPDLQPVMKFIESELPGSTLKEKHRNMLQYQLPSSLTSLAHIFSILAKNKEFLR
IEDYSVSQTTLDQVFVNFAMDQSDDHSDSSIHRKDTAINMALLSPLSAKENTEKPVESFV
NT seq
6843 nt
NT seq
+upstream
nt +downstream
nt
atgtctatctccactcagctgggtctgctgttgtggaagaacttcacctacagaaggaga
caaacgctccaactgctgacggagattgtgtggcctctctttattttcttcatcctgatt
gctgtgaggttgaactacccgccttatgagcaacacgaatgtcactttcccaacaaagcc
atgccctcagcaggcaccctgccctggatccagggcatcgtctgcaatgccaacaatccc
tgcttccgacacccaacccccggggagtctccaggagtcgttggaaatttcaacgattcc
ataatctcacgcctgttttctgatgccaagaagatcttactgtatagtcaaaatgacaag
agcttagacggattcaaggagcttatcagagcagttaaagtcatgcaaaacaacacagct
ggtttcaagctaaaggacttcctgggtgaaaatgaaaccctttccatgttcctccaacaa
aacgcctccttttcccataatcaggtgcagaatattctggaagctgatgtaaatcttgaa
aaggtgctgatcaaaggttttggcgtccatctgagagacatgtgcagcaccaccacactt
gaggattttgtgagcattccagacgaaagggtggcgagattcacccaggagctcatctgc
agcgctcccaaaagctggctagaccaggccgagggacacttcaagtccaacttggatttc
ctcaaacctattaagtcagagataaggactaatgccactgatgtccgtctagttgccaaa
gctacagacaaccttctggaaagcctgggatcactggctgtggagctggccagtatgagg
agctggagtgacctgcgaaacgagatcctgtttctgtcagaaaacgccaccggctcgccg
agtctgatgtaccaggctgtgtcccgaatcgtgtgtggacacccggaaggcggtggcctc
aagatcaaatccctcaactggtatgaggacagcaacttccaggcgctgtttggcaaccac
aatgagagtgatgacgaaccagtttcagtctatgacaacaccaccactccatactgtaac
aacttgatgaagaacatggaagccagtcctatctctcgaatgatctggagagcactgaaa
cctctcttgatggggaagatcctctacacaccacacagccctgcaacacagaagatcatt
catgaggtcaacaagacatttcaggagctcggagttctacgagatttaggcggaatgtgg
gaagaagccagaccgaaggtttggaacttcatggagaacagtgaagaaatggatctgatg
cggatccttcttcgaaacaatgccactgctagtttcttcagtgcccagttggctgggact
caatggagtgtggaggatgttataagcttcttgtctaagcactccgaggacacacgtccc
catgggacagcatttacgtggcgggatgtcttcaatgagacggatcaggccattatgagc
atatcccgtttcatggagtgtgtaaacctggataaacttgaacctgtgagcacagaggag
aaaatggtgaacgagtccatgattcttctggataacagaaagttttgggcaggaattgtg
tttctggacattcagtccaacagctctgaacttccccaacacgtcaattacaagatccgc
atggacatcgacaatgtggagcgcacaaacaagattaaagatgggtattgggatcccggt
cctagggctgatccgttcgaggatatgaggtatatttggggaggatttacttacctacag
gatatagttgaacacagcatcatcagagcagttactgggaccaaagagaagactggtgtt
tacatccaacagatgccttatccatgttatgtagatgatattttccttcgcattatgagc
cgttccatgccgcttttcatgactctggcctggatgtactcagtggccatcatcatcaaa
ggtgttgtctatgagaaggaggcccggctcaaggagaccatgaggattatgggattggac
aatggtatcctgtggttaagttggttcattagcagcttcatccctcttctcatcagcgca
ggcctgctagttcttctactcaagatgggtaatctcctgccctacagtgaccctggcgta
gtcttcctcttcctcgtgtcattcgctgtggtaaccatcatgcagtgttttctgatcagt
acggcgttcgcacgtgccaacctggcagcggcttgcgggggcattatctacttcaccctc
tacctgccttatgtgctctgtgtggcttggcaagactatgtgggcttcagcgccaaagtc
attgctagcttactgtctccagtggcatttggatttggctgtgagtattttgccctgttt
gaagagcagggagtgggcatccaatggaataacctcttctccagcccaatggaagaagac
aactacaacctcaccacctgcctcatcctcatgtactttgatgccttcctgtatggggtc
atgacctggtacattgaggctgtgttcccagggcagtatggcattcccaggccatggtac
ttccctttcagtaaatcctactggtttggagagagcaacacaaaaaatactgccgttcat
ggaaagaagggcaatgctggagccgtctgcattgaagaggaacccactcaccttgaattg
ggagtttacattaagaatcttgtgaaggtctaccgtcatggcaaaaagctagcagtcgat
gggttgacacttggcttctatgaggggcaaataacttctttcctaggtcacaatggagct
ggaaaaaccaccaccatgtctatcctaactggcctattccctcccacctctggcactgca
tatatcatgggcaaagatattcgctcagagctcagttccattagacggagtctcggagtg
tgtccacaacacaatgtcctcttcagcatgttgacagtagaggagcacatctggttctac
gcccgtctgaagggtctgtctgaggaggatgtgaaggctgagacggagcagattctgact
gatactggccttccacacaaacgcaagtccaggaccagccagctgtcaggtggtatgcag
aggaaactctcggtagcccttgcttttgttggagggtcaaaggttgtcattttggacgag
cccactgctggtgtggacccatacgctcgaagaggcatctgggaccttcttctgaagtat
cgtacaggtcggactatcctcctttctacccatcatatggatgaagcagatattctgggc
gatcgtattgctatcatctcccatggaaagctttgttgtgtgggctcttcgctctttctt
aagactcaacttggaactggatactatcttaccttggtgaagaaaaacactgagccttct
ctcagctcatgcaggaactcgagcagcactgtgtcctttgttaagaaagatgacaatgca
tctgagagcagttcggatgctggtctaggtagtgatcaagaaagcgaggccgccactgcg
ataggaactacatggcctgaatctcctgttgttcctgttgatgtagacctcatctccagt
ctaatcctgaagcacgttcctgcttctcgcatggtggaagacctcggtcatgagatcaca
tatgtgttgccgtacgagtctgccaaagatggtgctttcgttgagctcttccatgacctg
gatgatcggctcgctgaccttggcatttccagctatggtatctcagatactacacttgaa
gagattttccttaaggtggcagaggacagtggagttgatgctgaaatcatctcagatgga
actgtgccagttcccagacatagacgacacgcatttggtgctgaccaccagagctgcctc
aaaccactgaccgaagatgatgacagcaacgactctgacgttgatccagaatcaaaagaa
acagactatttgagcgtttccaatgggaaagggtcatatcaagtgaaaggctggagtttg
aagaggcagcagtttgtggctttactgtggaagagatttctgtatgctcgccgctcaagg
aaaggcttctttgcacagattgttcttcccgctgtgtttgtgtgcattgctctggtattc
agtcttattgtgccaccattcggaaaatatcccagcctggctctcaatccctggatgtat
gaagaacagttcacatttatcagtgatgatgctccacatgatataagcacacaaaagtta
ctcagcgctttattagatgatcctggctttggaacacgatgcatggaaggagaaccaatt
cccgatgctccctgtacaatgggcgatgaggaatggtctacacaagaagtttcagaaagc
gtgatggaaattttcacgtcaacaaactggaccatggacaacccatcacctgcttgtgaa
tgcagctgtaatggcaaaaagaagatgcttccagaatgccctgctggtgcaggtggactg
ccacctcctcagattaagatgagtgaaactgagaccctccagaacctgacgggacggaac
atctcagactatctcgtgaagacctatgcacagatcattgggaaaagcttaaaaaacaag
atatgggtgaatgaattcagatatggaggattttcattgggagctagaagcactcaggta
cttcctcctgctgaagagatcgacgacgccatctccagagtcagggaaatcttccaactg
gggaaggactcaggatcagcggccgaccgttttttaaaaagcctgtctggcttcatcaat
gggctggacactaagaataatgtcaagatatggttcaataacaagggctggcacagtatt
ggagccttcctcaatgtaatgaacaatggtatcttgcgtgccaacttacaacctggcaga
gacccccatcagtttggcatcactgcgtttaaccatccgctcaatctgaccaaggaacag
ctttctcaagtggccctaatgaccacctcagtggacgtgctggtttccatctgtgtgatc
ttcgccatgtccttcgtccccgccagcttcgttgtcttcctcattcaggagcgagtgaat
aaggccaagcacatgcagtttatcagcggagtgcagccatacctctactggctggccaac
tttctctgggatatgtgcaattatgtagttcctgctactctggtgatcctgatctttgtg
tgctttcaacaaaaagcctacgtctctgcaaccaacctgcctgttcttgcccttctactg
cttctttatggatggtccatcactcctcttatgtatccggcttcattcctcttcaaaatc
cccagcactgcttatgtggtgctcactagtgtcaatatcctcattgggatcaatggcagc
gtgtccacttttgtcatggacttatttggaagtaatgaggttggtggcctaaatgacatc
ctgaagaacgttttgctcatcttcccgcatttctgcctgggtcgaggtctcatcgacatg
gtgaagaatcaggccatggctgacgctctggagagatttggtgagaaccgtttccgttct
ccattggagtgggacatggtgggcaagaatctttttgctatggctgtggaaggattggtt
ttcttcatcatcacagtccttatccagtaccgttttttctttaaacccaagtctttaagt
gccaagttgactccgattggagaggaagatgaggatgtggccagagagaggcagagaatc
atgagtggagctggacagggagacattcttgaactcagacaactcactaaggtgtacaag
cggaaacagaagcccgctgtcgatcgtctgtgtgttggcattcctccaggagagtgtttt
ggtctgcttggtgtcaacggagctggaaagacaagtacttttaaaatgctgactggagac
tctgtggtcaccaaaggagaagcattcttggctgggaaaagtatactccgagaaatagat
gaagtacatcagaacatgggctactgccctcagtttgatgccatcaatgatctgctgaca
ggacgggaacacctggaattctatgccatcctgcgcggtgtacccgagaatcaagtttgt
gaggtggcggagtggggtatccgtaaactaggcctcgtgaagtacgtggataagaaagca
ggaagctacagtggtggcaacatgcgcaaactctccaccgccatatcactcattggagcc
ccaccagtggtcttcctggatgagcccaccactggaatggaccccaaagcacgacgagca
ctgtggaactgcatccacagcgtcatcaaagagggacgctctgtcgtacttacctcacac
agtatggaggaatgtgaagcgctgtgcaccaggatggccatcatggtgaacggcaggttc
cgctgtctgggtagcgtccagcacctgaagaacagatttggcgatgggtacaccataatt
ctgaaggttgcgggcccagatcctgacctgcagccggtgatgaagttcattgagagcgag
ctgccaggaagcaccctgaaagaaaaacacagaaacatgctgcaataccagcttccctcg
tccctcacctccctcgcgcacatcttcagcatcctcgctaagaacaaagagtttctcagg
atagaagactactctgtgtcccaaaccactctggaccaggtatttgttaactttgccatg
gaccagagtgacgatcactcagacagctccattcatcgtaaagacacagcaatcaacatg
gccctcctgagccctctgtctgctaaagagaacacggagaagccagtagaaagctttgtg
tga
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integrated database retrieval system
