Carassius gibelio (silver crucian carp): 127971334
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Entry
127971334 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04120
Ubiquitin mediated proteolysis
cgib04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127971334
04120 Ubiquitin mediated proteolysis
127971334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127971334
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127971334
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127971334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
127971334
NCBI-ProteinID:
XP_052430198
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All DBs
Position
B14:complement(19189329..19197653)
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AA seq
617 aa
AA seq
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MVRAALVTATSLVLTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKL
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMVLLAVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTVVLTTFIKYTLHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLALRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPAPAQAPAPAAPANAPVP
PPVNVAPGMMPQFPPGLFPFWGPFPGAPPPPPAAPGAQAATDAPQTSAAATQAQGAESGA
SSSTQPNADSASAAPGAMPGFPFSMPPPFPSAPWLPMPPPPPFMSSMPPPPSTLSTMSEA
ELRELEQEGRRGLEARLQCLHNIHTLLDAAMLNIHHYLSTVATLSPPRSDNNAGETSASV
NAESSSSTGNTETPSQENEAPSDGSVNGATGFSLPDSTTGVDKDRKEEDEEDEGEPNAAE
LRRRRLRKLETTNTPDH
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagccgctctggtgacagccaccagtttggtgctgactggtgcagtggtggct
catgcatacttcctcaagcaccagttctaccccactgtggtgtacctcactaaaagcagc
cctagcatggcagttttatacattcaggctttcgttttggttttccttttggggaaatta
atgcggaaagttttttttgggcaactgagagctgctgaaatggagcatctgattgaacgc
tcctggtatgcggtgaccgagacctgtttggcatttacagtcttcagggatgatttctct
ccacgctttgtggccctgttcactttgctgcttttcctcaagtgcttccactggctggct
gaagacagggtggactttatggaaaggagtccaaatatctcatgggtcttccactttaga
gttctctctctgatggtgttgctggcagtgttggactttctgtttgtcaatcatgcgtgt
cacagcattataacaagaggagcttcagtgcagctggtttttggatttgagtatgcaatt
ctgatgactgtggtcctcaccaccttcatcaagtacaccttacatacagttgatctgcag
agtgagaatccctgggacaataaggccgtctacatgctctacacagagctctttacaggt
ttcatcaaggtgcttctgtatatggcgttcatgaccataatgatcaaagtgcacaccttc
cctctgtttgccattcgacccatgtatctcgcattgaggcaattcaagaaggcagtaaca
gacgccatcatgtctcgacgagccattcgtaatatgaatactctctatccagatgccacc
cctgaagacttgcaagccactgataatgtgtgcatcatttgcagagaagagatggtgact
ggagccaagaaattgccgtgcaaccacatctttcactcaagttgccttcgctcatggttc
cagagacagcagacgtgtccgacgtgtcgtatggatgtcctccgagcatcccagccgaac
cagactccagctcctgcacaagcacctgccccagccgctcctgctaatgcccctgtacct
ccacctgtcaatgtcgctccaggtatgatgcctcagtttcctccgggtctgtttcccttt
tggggtcccttcccaggcgcgccgcctcctcctcctgctgctccaggtgcacaggcagct
actgacgcaccacagaccagcgccgctgcaacacaggcacagggagcagaatcaggagcc
agcagctcgacccagccgaatgcagacagcgcctctgctgctcccggagcaatgcctgga
ttccccttctccatgcctccacctttcccatcagctccgtggctgccgatgcctccacct
ccaccctttatgtcatcgatgccgccgcctccatcgactctgtccaccatgtcggaggcc
gagctcagggaactggagcaggagggcaggcgaggtttggaagccaggttgcagtgcctt
cacaacatccacacactgctggatgccgccatgctcaacattcaccactacctcagcacg
gtggctacgttaagtcctccaagatcagataacaatgctggtgagacgagtgcatcagtg
aatgcagagtcctcttcctccacgggcaacacggaaactcccagtcaggagaacgaggct
ccgagcgatggatccgtcaatggagctacaggcttttctctaccagactcaaccacagga
gtggataaagacaggaaggaggaagatgaagaggatgagggtgagccaaatgctgctgag
ttgagacgacgtcgtctgcgtaaactggagaccactaatactcctgaccactga
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