Carassius gibelio (silver crucian carp): 127971390
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Entry
127971390 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130-like isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127971390
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127971390
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127971390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
PspB
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
127971390
NCBI-ProteinID:
XP_052430333
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All DBs
Position
B14:complement(24490707..24533503)
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AA seq
427 aa
AA seq
DB search
MLKRLAAPASCSSCLLAFLLAFVSPRCTLSIGADKTMVNKEDYYSATVNATVLDHKGNPQ
QIFTKNDGRYGQNSPKTEAKGIVIAPAAVNGAVDLQGCCPTRFIVPPKTTHWVAIMQRGK
CTFKEKILKAAAFNASAVIIYNNSTKEDTVTMAHEGTGDIVAVMITESFGKEILGFLEKN
QTVLVSVMVGSRGLPKNINRGSLVFVSISFIVLMIISSAWLIFYFIQKIRDTSARDRSQR
RLGDAANKAISKLTTRTVKRGDKEAEPDFNHCAVCIEGYQLNDVVRILPCKHVFHKMCVD
PWLNEHCTCPMCKLNILKALGVMPNLPCVDNMAFDMDRMSRSQTSSQRTALVDLSSETSI
SLEPLHHSSSSQLPSDEELIPRSGEINIAVTKEWFIVASFGVLSALTLCYMIIRATAIAP
TYELKLE
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagagattggccgcgccggcgtcatgcagcagctgccttcttgccttcctcctc
gccttcgtctcgcccaggtgtacgctgtctatcggtgccgacaaaactatggtgaacaag
gaggattattatagcgccacggtcaacgccaccgttctggaccataaaggcaatcctcaa
cagatatttacgaagaatgacgggcgctacgggcagaattcccccaaaacagaggcgaag
gggatcgtgatcgcacctgctgccgttaatggggcagtggatttgcaaggctgctgtccc
acccggttcatagttcctccgaaaaccacacactgggtggccattatgcagagagggaag
tgcaccttcaaggagaagatcctcaaggcagctgcttttaatgcctcggctgtcatcatc
tacaataacagcaccaaagaggacacagtcacgatggctcatgaaggcactggagacata
gtggcggtaatgatcacagagtcctttggaaaggagattctgggattcctggagaagaac
cagactgtgttggtgtctgtgatggttgggtcacgagggctgcccaagaacatcaaccgc
ggctccttggtgttcgtctccatctcctttatcgtgctgatgattatctcctctgcttgg
ctgatcttctacttcatccagaagatcagagacaccagcgcacgcgaccgcagtcagcga
cggctgggagatgctgccaataaggccattagcaagctgactaccaggacggtaaaaaga
ggggacaaggaagcagagccagattttaatcattgtgcagtgtgcatcgaaggttatcag
ctaaacgatgtggtccggatcctaccctgcaagcacgtcttccataaaatgtgtgtggat
ccatggctaaatgagcactgcacctgtccgatgtgtaaactcaacatcctcaaagctctg
ggagttatgcccaacctgccctgtgtggacaacatggcttttgacatggatcggatgtcc
cgtagtcagacttccagtcagaggacagcgctggtggacttgtcctctgagaccagcatc
agtctggagcctctgcaccactccagttcctcccagcttccctccgacgaagagctcatt
cctcgctccggagagatcaacattgcggtcactaaagagtggtttattgttgccagcttc
ggcgtcctctctgctctcacactttgctacatgatcatcagagccactgccatcgccccc
acctatgaactgaagttggaatga
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