Carassius gibelio (silver crucian carp): 127971408
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Entry
127971408 CDS
T08819
Name
(RefSeq) zinc finger BED domain-containing protein 4-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127971408
04121 Ubiquitin system [BR:
cgib04121
]
127971408
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
127971408
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127971408
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
zf-C2H2_12
DUF659
BIR
Motif
Other DBs
NCBI-GeneID:
127971408
NCBI-ProteinID:
XP_052430366
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All DBs
Position
A4:complement(15281830..15284250)
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AA seq
593 aa
AA seq
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MEAPQKRCRKSVVWEHFHLETPNKVRCMYCDRQLAYFNNTSSMMRHLRSTHPAILQCAED
GNIPPVPRPATDTAGPSKQGRQRELDEALVDMVVKDLQPFTIVEDEGFMAFVNKLDPSYV
LPSRKALKTMVTERYNISKEKTMEDLKKADFVSLTADMWSSINMDGYLGVTCHYITPEAK
LATVVLGVRRFYQTHTAQHLMEAKALLMAEWGITTKVQCMVTDNASNMILSAQLLNLRHV
PCFAHNLNLIVKKALDQTPLINEIRQKARKIVGLFRSSCKAKDKLVEMQGLMGRPALKLM
QEVDTRWNSTYDMLQRLYEQREPVGAALSNLNSDTAPLTSFEYNIIQESLSQLQPFKLAT
TELSEEQRVSASKLIPLYRMLQHKLSQKKGQSAQESTAQLGTHLQEGLHSRCGGYESFRA
LALATLLDPRFKNVGFGNPAKAQEAEKQITLECASLMRSNTATPEPQSTSGPSSSSSTTT
STTETQDSLWELFDSRIHETQAIHSATADATVEVKKYLKDAFLPRTHDPLSYWKERAVIF
PHLYVLAKKYLCMPATSVPCERIFSKAGEIISKKRSRLSPSTAEQLIFLNKNL
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggaggctccacagaagagatgccgtaaatctgtggtgtgggagcatttccatttggaa
accccaaataaagtgagatgtatgtattgtgataggcagctagcctacttcaacaataca
tcatccatgatgcgccatttgaggagcactcatcctgccattttgcagtgtgcagaggat
ggtaacattccccctgtacctaggcctgctactgacactgctgggccatctaaacaaggc
agacagagggaattggatgaggctcttgtagacatggtggtaaaggatttgcagcccttc
actatcgtggaggatgagggtttcatggcttttgtgaacaaacttgatccaagctatgtc
ctcccatcccggaaggcacttaaaacgatggtaaccgaaaggtacaacatttctaaggag
aagacaatggaggacctaaaaaaggcagattttgttagccttacagctgacatgtggtcc
tccattaatatggacggataccttggtgttacttgccactacataacaccagaggcaaag
ctggcaactgttgtactgggtgtaaggaggttttaccaaacacacacagcccagcatctc
atggaggctaaagctttgctaatggccgagtggggaataaccaccaaagttcagtgtatg
gtgactgataatgcatccaacatgatcttaagtgcccagctactgaaccttcggcatgtc
ccatgttttgcccacaatttaaatttaattgtaaaaaaggccctagatcaaaccccactc
atcaatgaaatacgacagaaagccagaaagatagtggggttatttagatccagctgcaaa
gcaaaggacaagcttgtggagatgcagggcttgatgggcagaccagctctgaaactgatg
caggaggtggacacaagatggaacagcacttacgacatgttgcagcgcttgtatgagcaa
cgagagccagtgggtgcagcgctatcaaatttaaacagtgatactgctccgctgacaagt
tttgagtataacattatacaagaatcattgtcacaactgcagcctttcaaactcgcaacg
acagagttgtcagaggaacagagagtgtctgcttcaaagctcataccactttacaggatg
ttgcagcacaagctatcgcagaaaaaaggccaatcagcacaggaatcaactgcacaatta
ggcacacacctgcaagaaggtctgcactcaagatgtggtgggtacgagtcattcagagcc
ttggctctggctacactgctggacccaaggttcaaaaatgtgggttttggaaatcctgcc
aaagcccaggaggctgaaaagcagatcacactggagtgtgcttcgctgatgcgttcaaac
acagcaactcctgagccacagtcaacatcaggcccatcatcatcatcatcaacaacaaca
tcaacaacagaaacccaggacagtttatgggaactttttgatagtcgtatccatgaaacc
caggcgatacacagtgccacagcagatgccacagtagaagttaaaaagtacctaaaagat
gcatttttgccaagaacccatgatccactaagttactggaaagagagagctgtgattttt
cctcatttgtatgtccttgctaaaaaatatctatgcatgccagcaacaagtgtcccttgt
gagaggattttttctaaggctggagaaattatcagtaaaaaaagaagtaggctaagccct
tccacagcagagcaattaatatttttgaataaaaatctttaa
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