Carassius gibelio (silver crucian carp): 127971581
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Entry
127971581 CDS
T08819
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1b
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib00061
Fatty acid biosynthesis
cgib00071
Fatty acid degradation
cgib01100
Metabolic pathways
cgib01212
Fatty acid metabolism
cgib03320
PPAR signaling pathway
cgib04146
Peroxisome
cgib04216
Ferroptosis
cgib04920
Adipocytokine signaling pathway
Module
cgib_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
127971581
00071 Fatty acid degradation
127971581
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127971581
09143 Cell growth and death
04216 Ferroptosis
127971581
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127971581
03320 PPAR signaling pathway
127971581
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cgib01004
]
127971581
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
127971581
Enzymes [BR:
cgib01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
127971581
Lipid biosynthesis proteins [BR:
cgib01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
127971581
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of breast milk
127971581
Exosomal proteins of breast cancer cells
127971581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
127971581
NCBI-ProteinID:
XP_052430648
LinkDB
All DBs
Position
B14:10588524..10611389
Genome browser
AA seq
697 aa
AA seq
DB search
MQAHELLKQLRIPELSEVRDYFHSLSTNTLLGMGAFTAVTAYWFATRPKALKAPCDLRMQ
SVELPGGEFARRAAVLNGGPLLSHFYEDAMTLYEWFQRGLRESKNGPCLGSRKPKQPYEW
LSYSEVIERAENLGSAFLNKGHSKDGDPYIGIFSQNRPEWTISELACYTYSLISVPLYDT
LGTEAISYILEKTCISTVVCDVPEKVKLLLDCVSGRQHSVKTLILIENFDTDLVSRAQQC
GIDIISLRDAENIGKAHRQNPLPPQPDDLAIICFTSGTTGNPKGAMLTHGNIVSNVSAFI
NVTKPTCPISPRDTHISYLPLAHMFERVVQGVMLMHGGRIGYFQGDIRVLMDDLTTLKPT
VFPVVPRLLNRMFDKIYGQANSSLKRRILEFAFRRKEKEMKSGIMRRDSVWDKIIFKKVQ
ASVGGQVRMMITGAAPISAPVLTFLRAALGCNFYEGYGQTECTAGSTVTLPGDWTAGHVG
PPLSCNDIKLVDVAEMNYYATKGEGEVCVRGPNVFKGYLKDPEKTKEALDEDGWVHTGDI
GRWLPNGTLKIVDRKKHIFKLAQGEYIAPEKIENIYIRSEAVAQAFVHGDSLQACLVAVI
VPDPDFLPGWAKKRGIEGSYEELCKNKEVKKAILEDIVKLGKESGLKSFEQVKDIALHTE
MFSIQNGLLTPTLKAKRADLRDCFRKLIDELYSNIKM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcacacgagctgttgaagcagctgcgaatccctgagctgtccgaggtgagggac
tatttccacagtctctccacaaacaccctcctcggcatgggtgcattcaccgccgtcacg
gcgtactggtttgccaccagacccaaagccctcaaagcaccctgtgacctgcgcatgcag
tcagtagagctgccgggtggagaatttgctcgtcgagcggctgttttaaacggaggaccg
ctcttgagccatttctacgaggacgccatgaccctatacgagtggtttcaaaggggtctc
agggagtcaaaaaatggtccctgtcttggatcaagaaaaccaaagcagccgtatgaatgg
ctttcgtactcagaggtgattgagcgagcagagaatttgggatcagcatttttgaacaaa
ggacactctaaggatggagatccctacatcggcatcttctctcagaacagaccagagtgg
acgatttcagagctggcctgctacacttactctctgatatcagttcctctgtatgacacc
ttgggcacagaagccataagctacatcctcgaaaaaacctgtatttctacagttgtatgt
gacgtacctgagaaagtcaagctgctgttggactgtgtttcgggccgacagcactcagtc
aaaaccctgatcctcattgaaaactttgacactgatttggtcagcagagcacagcagtgt
ggcatcgacatcatcagtctgagagacgcagagaatatcggcaaggctcatcgacagaat
cctttgcccccacagcctgatgacttggctattatttgttttacgagtggaaccactgga
aaccctaaaggagcgatgctcacccacggaaacatagtgtctaatgtttctgccttcatc
aatgtcacaaagcccacttgccccatcagtcctcgggacacacacatctcttacctgccc
ctggcacacatgtttgagagagtcgtacagggtgtgatgctgatgcacggcggacgtatc
ggatacttccagggtgacatccgagttctgatggatgacctcacgaccctgaagcccacc
gtgttccctgtggttcctcgtctgctgaaccgcatgtttgacaagatctacggacaggcc
aacagttccctgaagagacgcatcctggagtttgcgttcaggaggaaagagaaggagatg
aagagcggcatcatgaggagagacagtgtgtgggacaagatcatcttcaagaaagtccag
gccagtgttggaggacaggttcggatgatgataactggagcggctcccatttcagctcct
gttctcaccttcctgcgagctgcgctgggctgcaatttttatgaaggatacggtcagact
gaatgcactgcagggagcacagttacactaccaggagactggactgcgggtcatgttgga
cctcctctgtcctgtaatgacatcaaactagtggatgtggcagagatgaactattatgcc
actaaaggcgagggagaggtgtgtgtgaggggtcctaatgtttttaaggggtatctgaaa
gaccctgagaagacgaaggaggctcttgatgaagacggttgggttcacactggagacatt
ggcaggtggctgccgaatggcactctaaagattgtggatcgtaagaagcacatttttaag
ctggctcagggtgaatacatcgctccagagaagatcgagaacatttacatcaggagcgaa
gctgtggcgcaggctttcgttcatggagacagtctgcaggcctgtctggtagccgtcatt
gtgcctgatccagactttctgcccggctgggccaagaagagaggcatagagggctcgtat
gaagaactgtgcaaaaataaggaggtgaagaaagccattctggaagatattgtcaaattg
ggtaaagaaagtggcctgaagtcttttgaacaggtgaaggacattgctctccacacagag
atgttctccatccagaacggcctcctgacgcccaccctgaaagccaaacgcgctgacctc
agggactgcttcaggaaactgatcgatgagctttactccaacatcaaaatgtaa
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