Carassius gibelio (silver crucian carp): 127971622
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Entry
127971622 CDS
T08819
Name
(RefSeq) F-box and WD repeat domain-containing 11-A-like isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04114
Oocyte meiosis
cgib04120
Ubiquitin mediated proteolysis
cgib04218
Cellular senescence
cgib04310
Wnt signaling pathway
cgib04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127971622
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127971622
04340 Hedgehog signaling pathway
127971622
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
127971622
04218 Cellular senescence
127971622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127971622
03036 Chromosome and associated proteins [BR:
cgib03036
]
127971622
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127971622
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
127971622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
Beta-prop_EML_2
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
F-box-like
ANAPC4_WD40
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
Beta-prop_IP5PC_F
NBCH_WD40
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_like
F-box
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
WD40_RFWD3
WD40_2
An_peroxidase
Motif
Other DBs
NCBI-GeneID:
127971622
NCBI-ProteinID:
XP_052430724
LinkDB
All DBs
Position
B14:9239820..9261974
Genome browser
AA seq
562 aa
AA seq
DB search
MDPDMEDKTLELMCSLPRSVWLGCSSVAESLCALRCLQSLPSSRAHNQSMMVMESQNNTG
DVSPKKTTVFKFGNGSVAGSRKRMSQGSFEKEKDLCIQLFDQWSESDQVEFVEHLIARMC
HYQHGHINSYLKPMLQRDFITALPAQGLDHIAENILSFLDARSLCSAELVCREWQRVISD
GMLWKKLIERMVRTDPLWKGLSERHQWEKYLFKNRTNEVPPNSYYHSLYPKIIQDIETIE
ANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKIISGLRDNSIKIWDKQSLECLKVLTGHT
GSVLCLQYDDRVIVTGSSDSTVRVWDVVSGEVLNTLIHHNEAVLHLRFWNGLMVTCSKDR
SIAVWDMASATDISLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFVRTLN
GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGA
YDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFDEFQIISSSHDDTILIWDFL
NVSTNGQPERRSPSRTYTYVSR
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggatccggacatggaggacaaaaccctggagctgatgtgttctttgcctcgttctgtc
tggctgggttgttcgtcggtggcagagagtctgtgtgctctcagatgcctgcagagcctc
ccgtcttcccgagcccacaaccagagcatgatggtgatggagtcacagaataacaccggt
gacgtctcacccaagaagacaacagtgttcaagtttgggaatggttcagtagcgggttcg
aggaagaggatgtcgcaggggagcttcgagaaggagaaagatctgtgcatccagctgttt
gatcagtggtccgaatcggatcaggtggagtttgtggagcatctgatcgcacgcatgtgt
cactaccagcacggccatataaactcgtaccttaaacccatgttacagagagacttcatc
accgcgttgccagctcagggtctggatcacatagcggagaacatcctgtcgtttctcgac
gctcgttctctgtgctctgctgagctggtctgtcgagaatggcagcgggtcatttcagac
gggatgctctggaagaagctgatcgagaggatggtgcgcacagacccgctgtggaaaggc
ctgtcagagcgccaccagtgggagaaatatttatttaagaaccgaactaacgaggttccg
cccaattcgtactaccattcactctatcccaaaattatacaagacattgagactattgaa
gcgaactggcgttgtggacgtcacaatctccagcggattcagtgccggtcagagaacagt
aaaggtgtttactgccttcagtacgacgacgacaagatcatcagtggcctgcgagacaac
tccatcaaaatctgggacaaacagtctctggagtgtctgaaggtcctgacgggtcacact
ggctcggttctgtgtctgcagtacgatgatagagtgattgtgacaggctcctctgattcg
actgtcagggtgtgggatgttgtctctggtgaggttctcaacactctgatccatcacaac
gaggcggttctgcacctgcgcttctggaacggtctcatggtgacttgttcgaaagatcgc
tccatcgcggtgtgggacatggcgtctgcgaccgacatcagcctgcgccgtgtgctcgtg
ggtcaccgcgccgccgtcaacgtggtggactttgatgacaaatacatcgtgtctgcgtct
ggagacagaaccataaaagtgtggagcacaagcacgtgtgagtttgtacggacgcttaac
ggtcacaagcgcggcatcgcttgccttcagtacagagacagactcgtggtcagcgggtcc
tcggacaacaccatcagactgtgggacattgagtgtggagcttgtctgcgtgtgctggag
ggtcacgaggagcttgtgcgctgcatccgattcgacaacaagaggatcgtgagcggagca
tatgatgggaaaattaaagtttgggatttgcaggccgctctggatcctcgggcccctgcc
agcacgttatgtctgcgtacactcgtggagcattccggccgtgtgttccgactgcagttt
gatgagttccagattattagcagttcccatgacgacaccatccttatatgggacttcctg
aacgtctccaccaatggccagccggagaggcgatcgccctcgaggacatatacatacgtc
tccagatag
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integrated database retrieval system
