Carassius gibelio (silver crucian carp): 127971630
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Entry
127971630 CDS
T08819
Name
(RefSeq) cullin-4B-like
KO
K10609
cullin 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03420
Nucleotide excision repair
cgib04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127971630
09124 Replication and repair
03420 Nucleotide excision repair
127971630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127971630
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127971630
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
127971630
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
127971630
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
127971630
TCR (transcription coupled repair) factors
Cul4-CSA complex
127971630
Exosome [BR:
cgib04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127971630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
DUF3292
NurA
Motif
Other DBs
NCBI-GeneID:
127971630
NCBI-ProteinID:
XP_052430746
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All DBs
Position
B14:22788218..22800992
Genome browser
AA seq
861 aa
AA seq
DB search
MFPTGLPSPNPPPPAQEPRPAASDVHNDSSLTSSKKRKINNSEKEDTDSISSSPKVISNS
SSTTSSSSSSQQPQHIQKKLRFEDPLDLIGLDVKMAEESCNSAESCSKARNVFLSGGVGH
HANGLTKSAGSATFSNSKPGAAKKLVIKNFKEKPKLPENYTNETWQKLKEAVEAIQNSTS
IKYNLEELYQAVENLCSHKISAKLYKQLRVVCEDHIKAQIDQFREDALDSVLFLKKIDKC
WQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGILL
LIERERSGEAVDRSLLRSLLSMLSDLQIYQDSFEDRFLEETNRLYAAEGQRLMQEREVPE
YLHHVNKRLEEEADRVITYLDQSTQKRLIAAVEKQLLGEHLTAILQKGLNNLLDENRIQD
LSLLYQLFSRVKGGVLVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDQIIDV
CFMRNEKFVNGMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMI
IFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDM
ELSKDIMVQFKQHIQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQEIFKTFY
LGKHSGRKLQWQSTLGHCVLKAELKEGKKELQVSLFQTLVLLMFNEGEEFSLEDIKLATG
IEDGELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETV
EEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIES
LIDRDYMERDKENPNQYNYVA
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttaccttcccctaaccccccaccgccagcccaagagcccagaccg
gcagcttctgatgttcacaacgacagtagcttaacgtcttctaagaagaggaaaattaac
aattccgagaaagaagacactgattcaatatcttcgtctcctaaagtcattagtaattcc
tcctccacaacgtccagctcttccagttcacaacagccgcagcacatccagaagaagttg
aggttcgaggacccgctggatttgatcggattggatgtgaagatggccgaggagtcatgt
aactctgctgaatcgtgttcaaaggcgagaaatgtgttcctatctggaggagtcgggcat
catgctaacggactgaccaagtctgcgggctccgccaccttctccaacagcaaacccggt
gctgcgaagaaacttgttatcaagaactttaaagagaagcccaaattaccggagaattac
acaaatgagacctggcagaagctgaaggaggcagtagaggccatacaaaacagcacttca
ataaagtacaatctagaggagctctatcaggctgttgaaaatttgtgctcccataagata
tcggccaagctctataaacagctcagagtggtctgtgaagaccatatcaaggcacagatc
gatcagttcagagaggatgccctagacagtgttctgttcctgaagaaaatagacaaatgt
tggcaagatcactgcaggcaaatgatcatgattaggagtatatttttgtttttggatcgc
acatatgttttacaaaattcaatgctgccatcaatctgggacatgggcttggagttgttt
cgtttctatatcatcagcgacctgaaggtgcagagtaagacaatcgatgggattctgctt
cttattgagcgagagcggagtggagaggccgtagaccgcagtcttctgaggagtcttctg
agcatgctctcagatctgcagatttatcaggattcatttgaggatcgctttctggaggag
acaaatcgactgtatgctgcagagggccagagactcatgcaggaaagagaggtgccagag
tatctccatcatgtcaacaaacgtctggaagaggaggcagatcgagtcattacatactta
gaccagagcacacaaaaacgcctcattgccgcagtggaaaagcaactgcttggagaacac
ctcactgcaatacttcagaaaggtttgaataacctgctggacgagaaccgtattcaggat
ctgtctctgctgtaccagctcttcagtcgtgtgaagggaggcgtgctggtgcttctgcag
cactggatcgagtacatcaaggcctttggaagcacaattgtcatcaacccagagaaagac
aagacaatggttcaggagcttttggatttcaaggataaagtagatcaaatcatcgatgtg
tgtttcatgaggaatgagaagtttgttaatggcatgaaggaggcttttgagacctttatc
aataaacggccaaacaaacctgcagagctcatagcaaaatatgtagattcaaagctccgt
gctgggaacaaagaagcaactgatgaggaacttgagaaaatgttggacaagataatgatc
atattcaggttcatttatggcaaagatgtttttgaggccttctacaagaaagacttggcg
aagaggttactggtgggaaagagtgcctctgtagatgcagagaagtctatgttgtcaaaa
ctcaagcacgaatgtggagctgcatttaccagtaagctggaagggatgtttaaagacatg
gagctgtcaaaagatattatggtgcagttcaaacagcacattcaatgccaaaatattcct
gggaacattgagctgacagtgaacatcctcactatgggctactggccaacatatgtaccc
atggaagtacatctgcctccagagatggtgagattgcaggagattttcaaaacgttttac
ctgggcaaacacagtggacggaaactacaatggcagtctacgttaggacattgtgtttta
aaggcagaactcaaagagggcaaaaaagagctgcaggtttccctgtttcagacgttagtt
ctgctgatgtttaatgaaggcgaggagttctctctggaggatattaaacttgctacaggc
attgaggacggtgagctgaggcggactctgcagtcactggcctgtgggaaggcacgtgtc
cttaccaaaatcccaaagagtaaagatgtggaggatggagacaagttctcttgtaatgat
gatttcaaacacaaactcttcaggattaaaatcaaccagatccagatgaaagaaacggtg
gaagagcaagccagcacaacagagagggtattccaggaccgtcagtaccaaatcgatgct
gccattgttcgaatcatgaagatgaggaaaacgctcagccataaccttctggtgtccgaa
gtgtacaaccaacttaaattcccagtcaagcctgctgatctgaagaagaggatagagtca
cttattgacagggactacatggaaagggataaggagaatcccaatcaatacaactatgtg
gcttag
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