KEGG   Carassius gibelio (silver crucian carp): 127971630
Entry
127971630         CDS       T08819                                 
Name
(RefSeq) cullin-4B-like
  KO
K10609  cullin 4
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03420  Nucleotide excision repair
cgib04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    127971630
  09124 Replication and repair
   03420 Nucleotide excision repair
    127971630
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cgib04121]
    127971630
   03400 DNA repair and recombination proteins [BR:cgib03400]
    127971630
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cgib04147]
    127971630
Ubiquitin system [BR:cgib04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     127971630
DNA repair and recombination proteins [BR:cgib03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      127971630
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      127971630
Exosome [BR:cgib04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   127971630
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW DUF3292 NurA
Other DBs
NCBI-GeneID: 127971630
NCBI-ProteinID: XP_052430746
LinkDB
Position
B14:22788218..22800992
AA seq 861 aa
MFPTGLPSPNPPPPAQEPRPAASDVHNDSSLTSSKKRKINNSEKEDTDSISSSPKVISNS
SSTTSSSSSSQQPQHIQKKLRFEDPLDLIGLDVKMAEESCNSAESCSKARNVFLSGGVGH
HANGLTKSAGSATFSNSKPGAAKKLVIKNFKEKPKLPENYTNETWQKLKEAVEAIQNSTS
IKYNLEELYQAVENLCSHKISAKLYKQLRVVCEDHIKAQIDQFREDALDSVLFLKKIDKC
WQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIDGILL
LIERERSGEAVDRSLLRSLLSMLSDLQIYQDSFEDRFLEETNRLYAAEGQRLMQEREVPE
YLHHVNKRLEEEADRVITYLDQSTQKRLIAAVEKQLLGEHLTAILQKGLNNLLDENRIQD
LSLLYQLFSRVKGGVLVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDQIIDV
CFMRNEKFVNGMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMI
IFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDM
ELSKDIMVQFKQHIQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVRLQEIFKTFY
LGKHSGRKLQWQSTLGHCVLKAELKEGKKELQVSLFQTLVLLMFNEGEEFSLEDIKLATG
IEDGELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETV
EEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIES
LIDRDYMERDKENPNQYNYVA
NT seq 2586 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttaccttcccctaaccccccaccgccagcccaagagcccagaccg
gcagcttctgatgttcacaacgacagtagcttaacgtcttctaagaagaggaaaattaac
aattccgagaaagaagacactgattcaatatcttcgtctcctaaagtcattagtaattcc
tcctccacaacgtccagctcttccagttcacaacagccgcagcacatccagaagaagttg
aggttcgaggacccgctggatttgatcggattggatgtgaagatggccgaggagtcatgt
aactctgctgaatcgtgttcaaaggcgagaaatgtgttcctatctggaggagtcgggcat
catgctaacggactgaccaagtctgcgggctccgccaccttctccaacagcaaacccggt
gctgcgaagaaacttgttatcaagaactttaaagagaagcccaaattaccggagaattac
acaaatgagacctggcagaagctgaaggaggcagtagaggccatacaaaacagcacttca
ataaagtacaatctagaggagctctatcaggctgttgaaaatttgtgctcccataagata
tcggccaagctctataaacagctcagagtggtctgtgaagaccatatcaaggcacagatc
gatcagttcagagaggatgccctagacagtgttctgttcctgaagaaaatagacaaatgt
tggcaagatcactgcaggcaaatgatcatgattaggagtatatttttgtttttggatcgc
acatatgttttacaaaattcaatgctgccatcaatctgggacatgggcttggagttgttt
cgtttctatatcatcagcgacctgaaggtgcagagtaagacaatcgatgggattctgctt
cttattgagcgagagcggagtggagaggccgtagaccgcagtcttctgaggagtcttctg
agcatgctctcagatctgcagatttatcaggattcatttgaggatcgctttctggaggag
acaaatcgactgtatgctgcagagggccagagactcatgcaggaaagagaggtgccagag
tatctccatcatgtcaacaaacgtctggaagaggaggcagatcgagtcattacatactta
gaccagagcacacaaaaacgcctcattgccgcagtggaaaagcaactgcttggagaacac
ctcactgcaatacttcagaaaggtttgaataacctgctggacgagaaccgtattcaggat
ctgtctctgctgtaccagctcttcagtcgtgtgaagggaggcgtgctggtgcttctgcag
cactggatcgagtacatcaaggcctttggaagcacaattgtcatcaacccagagaaagac
aagacaatggttcaggagcttttggatttcaaggataaagtagatcaaatcatcgatgtg
tgtttcatgaggaatgagaagtttgttaatggcatgaaggaggcttttgagacctttatc
aataaacggccaaacaaacctgcagagctcatagcaaaatatgtagattcaaagctccgt
gctgggaacaaagaagcaactgatgaggaacttgagaaaatgttggacaagataatgatc
atattcaggttcatttatggcaaagatgtttttgaggccttctacaagaaagacttggcg
aagaggttactggtgggaaagagtgcctctgtagatgcagagaagtctatgttgtcaaaa
ctcaagcacgaatgtggagctgcatttaccagtaagctggaagggatgtttaaagacatg
gagctgtcaaaagatattatggtgcagttcaaacagcacattcaatgccaaaatattcct
gggaacattgagctgacagtgaacatcctcactatgggctactggccaacatatgtaccc
atggaagtacatctgcctccagagatggtgagattgcaggagattttcaaaacgttttac
ctgggcaaacacagtggacggaaactacaatggcagtctacgttaggacattgtgtttta
aaggcagaactcaaagagggcaaaaaagagctgcaggtttccctgtttcagacgttagtt
ctgctgatgtttaatgaaggcgaggagttctctctggaggatattaaacttgctacaggc
attgaggacggtgagctgaggcggactctgcagtcactggcctgtgggaaggcacgtgtc
cttaccaaaatcccaaagagtaaagatgtggaggatggagacaagttctcttgtaatgat
gatttcaaacacaaactcttcaggattaaaatcaaccagatccagatgaaagaaacggtg
gaagagcaagccagcacaacagagagggtattccaggaccgtcagtaccaaatcgatgct
gccattgttcgaatcatgaagatgaggaaaacgctcagccataaccttctggtgtccgaa
gtgtacaaccaacttaaattcccagtcaagcctgctgatctgaagaagaggatagagtca
cttattgacagggactacatggaaagggataaggagaatcccaatcaatacaactatgtg
gcttag

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