Carassius gibelio (silver crucian carp): 127971654
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Entry
127971654 CDS
T08819
Name
(RefSeq) elongator complex protein 1-like isoform X1
KO
K11373
elongator complex protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cgib03016
]
127971654
Transfer RNA biogenesis [BR:
cgib03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
127971654
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR35_TULP_N
TPR_GEMI5
Beta-prop_EML_2
B-prop_COPA_B_2nd
Sin3a_C
NOL11_N
Motif
Other DBs
NCBI-GeneID:
127971654
NCBI-ProteinID:
XP_052430790
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Position
B14:12970064..12985235
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AA seq
1318 aa
AA seq
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MRNLSLLQRFRCVDLSSPGSPQCFTIRSETGTVLVASELAITEFDPRTEEVHKEVSLTAE
DYLPEDGSGVVVAIQDLPDQESVCVATGSGDVILYNLNTCQLECVGSVESGLTGMTWSPD
QELVALTTGQETIIMMTKDFEPITEVAINQDDFGEDKFITVGWGKKETQFHGSEGKQAAQ
RKSAEVQPALPWDDRKPRITWRGDGQFFAVSTVCPQTGARKVRIWNRECVLQATSEAVNG
LEQPLCWKPSGSLIASTQRHPNKHSVVFMEKNGLLHGDFNLPFGKEQVKVKELLWNSDST
VLAVWMEDLKPGENNHPNTYIQLWTVGNYHWYLKQSLHFGSEPLRAPACVCWDPEKSLRL
HLLTRGWASYTYDWGWSTDRSRGTDCHDNANVAVIDGDKVLVTTFRQCVIPPPMCAFELQ
LPVPVNLVTFRSQAQRTNELAALTADGHIHVYGPGGGAENEGVPGVSGFKVISAPLVLRK
TYRVTMDQEEPLTLRLLLWLKDDLFLAVAHGRYLTRLLKITPSDSQDPKDTLEIRSDVPV
DGFVISLCHSLRNGTVALQLDDGQIRKVHTDSSELSLTEWKDSSGNTINFPRPCVQTALC
TLSGEEHLIGLTERSHLYIGDSLVASNISSFVVYDDFLLLTTHSHMCHCLNLSTLSVKGL
QSALSSDANQNDETVRKVERGSRIVSVVPQDTRLILQMPRGNLETIHHQALVLAQLRKWL
DGLRFKDAFECMRKLRINLNLIYDHNPTAFLANIEMFLKQIDSINYINLFLTELKEEDTT
TTMYPCPSRSASSSASGKGGKKVDMICDALRSTMETLDPQKYCLCILTSHVRKTTPELEI
ALQKVHELRVNPASGSISVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAEKSQKD
PKEYLPFLNMLKTLEPNYQRYTIDKHLKRYRKALHHLSKCGEEHFTELLNLVKDQRLYSD
ALELYSSNSEQYKTLSVAYAEHLVEQEQAEQAGLLLWRCGENARALQAFVSCTSWRNALA
VATHIPLPPEQLALLARDLAEKLLEARRHKQAALCLEQYAKDCEEAISALIQGAAWEEAL
RLIYLYNRQDIIETDLKSALLDAHSNQTSFLESQKALFIRHKNRLAVVRELKAKARLELF
DEDGPDCADAELYSEASSVLTGSHLGSKYSRSNSRISSRSSKNRRKAEGKKHSLKEGSPF
EDIALLNALTQIITIVDKMREEVHSLLKALVLFQFDAAASSLQRDYGELLQLVESALPEI
WTDNQQQSQTPLTGPNSTANSIMASFQQQRPAVPQQDTETLSAPKMRIAVKWKLSILK
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacctcagtctgctgcagcgcttcaggtgtgtggatctgtcctccccgggatcc
ccacagtgtttcaccatcaggagcgagactggaaccgtgctggtggcctctgagcttgcc
atcacagagtttgaccctcggactgaagaggttcataaagaggtttcactgacggcagag
gactacctcccagaggacggcagtggggttgtggtggccatacaagatctgccagatcag
gagtcagtgtgtgtagccactggcagtggtgatgtcattctctacaacctcaacacctgt
cagttagaatgtgttggcagtgtggaaagcggtctaacaggcatgacgtggagcccagat
caagagttggtggctctgaccacaggtcaggagacaattatcatgatgaccaaggacttt
gagccaataactgaggttgcaatcaatcaggatgactttggcgaagataagttcatcaca
gttggttgggggaagaaggagactcaatttcatggctctgagggcaagcaagctgcccag
cggaaatctgcagaagtgcagcctgctctgccatgggacgacaggaagccaagaatcaca
tggcgtggtgatgggcagttctttgcagtcagcactgtttgtcctcagactggtgctcga
aaggttcgaatctggaaccgagaatgtgttctgcaggccaccagcgaggctgttaatggt
ctggaacagcctctctgctggaaaccctccggcagcctgatcgcttccacacagcggcac
cctaacaaacacagcgtggtgtttatggaaaagaatggactgttgcatggagattttaat
ctgccttttggaaaggaacaggtcaaggtaaaggagctgctgtggaacagtgactctact
gttctggctgtttggatggaggacttaaagcctggagagaacaaccatcccaacacatac
attcagctgtggacagtcgggaattatcattggtatctgaagcaaagcttgcattttggc
agtgagcccctcagggctccggcgtgtgtatgttgggatccggagaagtccttgcgcctc
cacctcctgactcgaggatgggccagctacacctatgactggggctggagcactgaccgc
agtcgaggcacagattgccatgataacgccaatgtggcagtgattgatggagataaagtc
ctggtgacaactttccgccagtgtgtgatccctccacctatgtgtgcttttgaacttcaa
cttcctgttcctgtgaacttggtcaccttccgttctcaagcccagaggaccaatgagctc
gctgcactcacagccgatggacatattcatgtttatggaccaggtggtggagctgaaaat
gaaggtgtacctggggtatctggctttaaagtcatctcagcaccattagtcttaagaaag
acatacagggtcaccatggatcaggaggaacctctgaccctgcgcttgctgctgtggttg
aaggacgatttgtttttggctgtggctcatggaagatacttgacccgcctgctgaaaatc
accccatcagacagccaggaccccaaggacacgctggagatcaggtcagatgttccagtg
gatggttttgtgatcagcttgtgtcacagcctcagaaatggcactgtggcactgcaactt
gatgacggacagatccggaaagttcacacggactcttcagagctcagtctaacagaatgg
aaggattcctctggcaataccattaacttcccccggccttgtgttcagacagcactatgt
accctcagcggagaggaacatttgataggcctcacagagagatcccatctctacatcggt
gactcactggtggcctccaatatctcctcgtttgtagtttatgacgacttcctcctgctc
accacacactctcacatgtgccactgtctcaacctcagcacactctctgtcaaaggtctg
cagtcagctctgagctcagatgctaatcagaatgatgagactgtacgaaaggtagaacga
ggctctcgcatcgtttctgtggttccccaggacaccagactcatcctgcagatgccacgg
gggaatctggaaaccattcatcatcaagctcttgtacttgctcagctcagaaagtggctt
gatggtctccggtttaaagatgctttcgagtgcatgaggaagctgaggataaacctcaac
ctcatttatgaccacaatccaactgcgtttcttgcaaacattgagatgttcctgaaacag
atcgactccatcaactacatcaacctgttcctcactgaactcaaagaggaagacaccact
acaacaatgtacccatgtccttcacgctcagcctccagttctgcctcagggaaaggagga
aagaaggtggacatgatctgtgatgcgttacggtcaacaatggagactctggacccacaa
aagtattgtttatgtattctgacatcacacgtgagaaaaacaacaccagaactagaaatc
gctctacagaaggtccatgagttacgagtgaacccagccagtggcagcatcagtgtgagc
gcagaggaagccctgaagtatcttctcttcctcgttaacgtgaatgagctgtatgaacac
tccctcggcacctacgattttgacctagtgctcatggtggctgaaaaatctcagaaggac
cctaaagagtacctcccatttctgaacatgctgaagaccctggagccgaactaccagcgc
tacaccatcgataaacacctcaagagatacaggaaggccttacatcacctcagcaagtgt
ggtgaagaacatttcacagaattgttaaacttggtgaaggatcagagactgtacagtgat
gctcttgagctctattcttcaaacagtgagcagtacaagaccctgagcgtggcctatgca
gagcatctagtggagcaggagcaggcggagcaggcgggactgttgctgtggagatgtggg
gagaacgctcgtgccctgcaggccttcgtcagctgtacgagctggagaaacgccctcgct
gtggccacacacatcccattaccacctgaacagctggcactgctcgcccgagacctggca
gagaaacttctggaggccaggaggcacaagcaagccgccctgtgtttggagcagtatgct
aaggattgtgaggaggccatctctgctctgatacagggagctgcatgggaagaagcgctc
cgattgatttatttgtacaacagacaggatatcattgagactgatctgaagtctgctctt
ctagatgctcacagtaatcagacgtctttcctggagtcccagaaggctttgtttatccgt
cacaaaaaccgccttgctgtggtccgagaactcaaagccaaggccagactggagttattt
gacgaggatggccctgactgtgcggatgctgagctctactcggaggccagcagcgtcttg
accggcagccatcttggctcaaaatactcccgcagcaactctcgcatttcatcgaggtcg
tctaagaatcgtaggaaagcagagggaaagaaacacagtctgaaggagggaagcccattc
gaggacatcgccctcctgaacgcacttactcaaatcatcaccatcgttgataagatgaga
gaggaggttcacagcctgctgaaggctctggtgctcttccagtttgacgctgcggccagc
agcctgcagagagactacggtgagctgctccagctcgtggagagcgctcttccagagatc
tggactgacaaccagcagcagagccaaaccccactcacaggtccaaactcaacagccaat
agcattatggcatcatttcagcagcagagacccgctgtgcctcagcaagacacagaaacc
ctgtcggctcccaagatgaggatcgcggtcaagtggaaactcagcatactcaaatag
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