KEGG   Carassius gibelio (silver crucian carp): 127971655
Entry
127971655         CDS       T08819                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cgib03041]
    127971655
Spliceosome [BR:cgib03041]
 Complex B
  Other components
   Complex B specific factors
    127971655
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_EML LisH_TPL NBCH_WD40 Beta-prop_RIG_2nd Beta-prop_TEP1_C Ge1_WD40 Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_NWD2_C WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N Beta-prop_BBS7 Beta-prop_SCAP WD40_RFWD3 Beta-prop_VPS8 Beta-prop_IP5PC_F Beta-prop_WDR75_2nd DUF7165 LisH LisH_PAC1 PROPPIN zf_topless VPS8_N PA14 LisH_WDR26 TolB_like
Other DBs
NCBI-GeneID: 127971655
NCBI-ProteinID: XP_052430792
LinkDB
Position
B14:complement(12985652..12990154)
AA seq 513 aa
MSIEIESADVIRLIMQYLKENNLQKTLATLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLVDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQAERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLARHIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDTEMMATGAQDGKIKVWKIQSGQCLR
RYERAHSKGVTCISFSKDSSQILSASFDQTIRIHGLKSGKSLKEFRGHSSFVNDATLTPD
GHHIISASSDGTVKIWNVKTSECTNTFKSLGTSAGTDITVNNVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCSLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctattgaaattgagtcagcagacgttattcgtctgatcatgcagtacctgaaggaa
aacaacttgcagaagactttagcaacgctccaggaggagacgacagtgtctctaaacaca
gtagacagtattgagagttttgtggcagatatcaacagcggtcactgggacactgtgctt
caggctatacagtccctcaaactccccgacaagaccctcgttgacctttacgagcaggtt
gttcttgagctgattgagctccgagagctgggagctgccagatctttgttgaggcagact
gaccccatgattatgctgaaacaaacccaagctgagcgatacatccacctggagaatctt
ctagcacgctcttactttgaccccagagaggcctatcctgatggcagcagtaaggagaag
cgtagagcagctatagctcaggctctcgcaggtgaggtcagtgtggtacccccgtcacgt
ctgatggctctgcttggacagtctctgaagtggcagcagcatcaaggtcttctgccacct
ggtatgaccatcgatttgttcagaggtaaagcagctgtgaaagacgtcgaggaggagcgc
ttccccactcagctggccagacacatcaagtttggtcagaagtctcacgtcgagtgctca
cgcttctctcctgatggccagtatctggttactggatctgtggatggatttattgaagta
tggaacttcactactggaaaaatcagaaaggatctgaagtatcaggctcaggataacttc
atgatgatggatgacgcagtgctgtgcatgtctttcagtcgggacaccgagatgatggcc
acaggagcccaggatggcaagattaaggtgtggaagatccagagtggccagtgtctgcgg
cgatacgagcgtgctcacagtaaaggtgtcacctgtatcagcttcagtaaagacagcagt
cagattctctctgcatccttcgatcagaccattaggatacatggattaaaatcaggcaag
tctttgaaggagttcagaggtcattcttcatttgtgaatgatgccacactcactcctgat
ggccatcacatcattagtgcctcatctgatggaactgtgaagatctggaacgtgaagacc
agcgaatgcaccaacaccttcaaatctttgggcacgtctgcgggaacagacatcactgtc
aacaacgtgatcctgcttcctaaaaacccagagcattttgttgtgtgtaaccgatccaac
actgttgtaatcatgaacatgcagggccagattgtgaggagtttcagctctggtaagaga
gagggtggtgattttgtatgctgctctctgtctccacgtggcgagtggatctactgtgtc
ggcgaggactttgtgctttactgtttcagcactgtcacaggcaaactagagagaaccctg
actgtacacgagaaggatgtgattggtattgcccaccacccacaccagaatttgatcgcc
acatacagtgaggatgggcttctcaaactctggaagccgtaa

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