Carassius gibelio (silver crucian carp): 127971860
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Entry
127971860 CDS
T08819
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2-like
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127971860
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
127971860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
TPR_8
TPR_MalT
SH3_2
TPR_10
SH3_9
TPR_NPHP3
SH3_1
HEAT_Nup120
TPR_5
PhnG
ANAPC3
Motif
Other DBs
NCBI-GeneID:
127971860
NCBI-ProteinID:
XP_052431076
LinkDB
All DBs
Position
B14:23393603..23408507
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AA seq
1422 aa
AA seq
DB search
MRNEHTAGSQQDRAISPAEFDALWNDPPYTLAAVSELFSPNDTMTADEEAEAEAEVEAES
ISREIYWRRKQTFSGSSTVSSAGERSSPDVVLLFSGRRRSGVAPDSELQEALRTRLRVVE
SNSQDVVQLFKDLSARLVSVHAEKDSFVITFKTVEEIWKFSTYLALGYVARCLENFLCDQ
SFWLDPALLSDVEICVTADEDHLATLYLGLLLQEGTFFAKTLYNSDCKEEEEELTYRRND
LVIVKDIGQEAIWEGSLLSTGQHGLVPVHNMQPLPYPFYQWFLKKYPGNAGGILVTDGLF
NHPVVVGTCVAVVDHYPVVKDELHLCKGDIIKIEGFLFNTLNMFIGRHLTSGEIGFVHKA
SVKPQSIEPIDGQLVFLSEEERAALCKLNPCFEPCQSDVLANLFSTDISTVYRLDRLDDS
DFTYIRNHPKSEQKSTEDQRKSTVSEKSDTTPYHSSPRQSFYASRNHLYQDSEVFSFSME
DTFREMDEYEEDPPNVMDEGIWETDEAERCDPILTLLNLEYFQDTFQTLYDLSYSFLDTF
FHGLPEDEVLQHLENLREGAKKCRMLWAHRRTCFLLGRLCAKKLKYSQARVYFEEALKVP
VTGFDDKPLLIALYTNLTAIYLKQKMKDKLPFTLEKASALIMCLPCHNFCSVDEFELLQP
IMRKAIVEKDKYLEARTCYLSLCLFLRLRKIEDALPFVERLQLLIITLSAEKGRPVAPVD
LNWMLCRLYHKKYLPYLTLASLSLDSGQEHSLDDAFQKIELFIKNSARLNPHWKESTSEL
PAQVVVYLQQALSIASQGEDFRTQRDLCLSLASVYQQHGALEKAVPFAQQAAKTGSQINE
EEGFEASVLLAWLLVLTDEPMQAQNTLQPMLKSLDETDSPTQRGVVHNLLALCLSKQGRV
QEAARNFYCALQISRENGNKRNEALALANLGCLFLSVGASGLAECFLLNSLHLFQFLSDS
PTDQEHVQVLLWLGRSYKDRGGSQEVRLCFEMGLLIAISANNLHSQMVVAKVLSRHYADL
LLYGQCIVYYEHCVGLCRTLKNKQLEGEYLELLSNLYLSLNTEKSSRKSLDYSKQSLRIS
IDLGKRQEESETWLQVGRIYYLIYEDELADMYLQAAVKTALRMNDPCFAMSIYEEAGDVF
FKGHRNQLAALPFYRDGSLPFARSIKDVHSEFRLLSKLTELLMKQKQYEEALQYATLAVQ
VSATTGVPLNERVSCHRLASVHFSLEKYEMAENFYLKSISVCPTALEHAIEVRYYVKVYC
RLADLTLYRLKDAFDAMGYFHLALAAALEDKESLSTLYIIYMKLAEIHANYIPDAELSKS
YMERAQSLRKELAGDTDSCDTEETHQDPAEAEPDTPTKDRSESNSGTSTLTESSMTNTSH
TINAESEHILSNTSHKDDPNTNISVETDTDTDPPDQTKRLAV
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgaggaacgaacatactgccgggagtcagcaggacagagcgatatcacccgctgagttt
gatgccttatggaatgaccctccatacactttagcagccgtcagcgagctcttttcgccc
aatgacaccatgacagccgatgaggaagcggaggctgaggctgaggtggaggcagaaagc
ataagcagagagatttactggaggaggaagcaaacattcagcggaagcagcacagtatct
tcagcaggagaacgctcttctccagatgttgttttgttgtttagcgggaggcgacgatct
ggtgtagcacctgacagtgagcttcaggaggcgttacgtaccagactccgagtagtagag
agcaacagccaggatgttgtccagctcttcaaggatctgtctgcaagactagtgtctgtt
catgctgaaaaagacagctttgtcatcacttttaagactgtcgaggaaatttggaagttc
tctacttatttggcacttggatatgtagcaagatgtcttgagaactttctctgtgaccag
tcgttctggctggaccctgcattgcttagtgatgtggagatctgtgtaacagcggacgaa
gaccacttagctactctttacttaggacttctgctacaggaaggtacattctttgccaag
actttatacaatagtgattgcaaggaggaggaagaggagctgacgtacaggaggaatgac
ctggtgattgttaaagacataggacaagaggccatttgggaaggttcactgctgtccaca
ggccaacacggtctagtgcctgtgcataatatgcagcctctgccctatccattttatcag
tggttccttaagaaatatcccggaaatgcaggagggattctagttacagatggcctattc
aatcatcctgttgtggttggaacttgtgtagcagtagtggaccattacccagtggttaaa
gatgagctgcacttatgcaagggagacataatcaagattgagggatttcttttcaatact
ctcaacatgttcataggaagacaccttacaagtggagagataggatttgttcacaaggcc
agtgtaaaacctcagagtattgagcctatcgatggacaattggtctttctcagtgaggag
gaaagggcagccctgtgtaaacttaacccctgctttgagccttgccagtctgatgtactg
gcaaatcttttctcaacagacataagcactgtgtatagactggatagacttgatgactct
gatttcacttacataagaaatcatccaaaatcagagcagaaatcaacagaggatcaaaga
aagagcaccgtatctgagaaaagtgacacaactccctaccactcgtcccctcggcaatca
ttctatgcctctcggaatcatctgtatcaggactctgaggtcttctccttcagcatggaa
gacacctttagagaaatggatgaatatgaggaagaccctccaaatgtcatggatgagggt
atctgggagacagatgaagccgagagatgtgacccgatcctgacccttctaaatctggaa
tattttcaggacacatttcaaactctttatgacctctcctactctttcctggacactttc
ttccatggccttccagaggatgaggtgcttcaacatttggaaaacttgcgagaaggagct
aagaaatgcaggatgctctgggcccaccggcgaacctgcttccttcttggccggctatgt
gctaagaaactgaagtactcacaagcacgagtgtactttgaggaggctctaaaggtccct
gtaactggttttgatgacaagccacttctaatagccctgtataccaatctcactgcaatt
tacctcaaacagaagatgaaggacaagctaccatttacactagagaaggcaagtgctcta
attatgtgccttccttgccacaacttctgctctgtggatgagtttgagctgctccaacca
atcatgcgcaaagccatagttgaaaaagacaagtacctagaggcacggacatgctacctc
tccctctgtctctttctccgtctaagaaaaatagaggatgctttaccttttgtagagaga
cttcagttacttatcataacactgtctgcggaaaaagggaggccagttgcccctgttgat
ctcaattggatgctgtgcaggctttatcataaaaagtatttgccctacctcacactagct
tctttaagtttagactcagggcaagagcattccttggatgatgcattccagaaaattgaa
ctctttatcaaaaactcagccaggcttaatcctcactggaaggaaagtacttcagagctt
cctgcacaggtggtggtctaccttcaacaagccttgtcaatagctagtcaaggggaagac
tttaggactcagagggacctgtgcctcagcctggctagtgtttaccagcagcatggagct
ttagagaaggctgtaccctttgcccagcaagcagcaaagactggaagtcaaattaatgaa
gaggagggctttgaggcatccgtactgctggcctggctattggtgctaacagatgaaccc
atgcaagctcagaatactctgcaacctatgcttaaatctttggatgaaacagacagtccg
acgcagcgtggtgtagtccacaaccttctagccctatgtctcagcaaacaaggcagagtc
caggaggcagcaagaaacttttattgcgctctgcagatctcccgagagaatgggaacaag
cgtaatgaagctctagcactggcaaacttgggctgcttgtttctgtctgtcggggcttcg
ggcctagcagagtgtttcttgctcaattccctgcacctattccagtttctctcagacagc
cccacagatcaggagcatgtccaggttttgctttggctcggcaggagctacaaagataga
ggagggagtcaggaagtcagactatgctttgagatgggcctccttattgctattagtgcc
aacaatctgcacagtcaaatggttgttgcaaaagttctaagtcggcattacgctgacttg
ctgctgtatggacagtgtattgtttactatgagcattgtgtggggctgtgcagaaccctt
aagaataaacagctagaaggagagtacctggaacttctcagcaacctctatctctcactc
aacactgagaagtcatcaaggaagtctcttgattattcaaagcaaagcttaaggatctcc
atagatctggggaaaagacaggaagagtctgagacatggcttcaagtgggccgtatctac
tatctgatctatgaagatgagctggctgacatgtacctacaggcagcagtaaagacagcc
ctgagaatgaatgacccatgctttgctatgagcatttatgaggaagcaggagatgtgttc
ttcaaaggacacagaaatcaactggctgcactaccattttacagggatgggagtttgcca
tttgcacgcagcataaaggatgtgcactcagagttcaggctgttgagcaagctcacagag
ctcctgatgaagcagaagcagtatgaggaggcactgcaatacgccacactcgcagtgcaa
gtcagcgccacaactggtgttcctctgaatgagagagtgtcctgccatcgtcttgcatca
gtgcatttctctttagagaagtatgagatggctgagaacttctaccttaagtctatttca
gtctgccctactgctcttgaacatgccattgaagttcggtactatgttaaagtgtactgc
agacttgctgatctgaccctatacagattaaaggatgcattcgatgccatgggctacttc
cacttagccctggcggcagctctggaggacaaagaaagcctaagcacactgtacataatc
tatatgaagctcgcagagatccatgccaactacattcccgatgctgaactgagtaaaagc
tacatggaaagagcgcagagtttgaggaaggaactggcaggagacacagactcttgtgac
acagaagaaacacatcaggacccagctgaggcagagcctgacactcccaccaaagatcgg
tcagagtccaacagcggcactagtactctgaccgagtccagcatgaccaacaccagccac
acaatcaatgcagagtctgagcacatactctctaacacaagccacaaagacgacccgaac
actaacatatcggtggaaacggacacagacacagaccctcctgatcaaaccaagagacta
gcagtttga
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