Carassius gibelio (silver crucian carp): 127971911
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Entry
127971911 CDS
T08819
Name
(RefSeq) protocadherin-10-like isoform X1
KO
K16499
protocadherin delta 2
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127971911
Cell adhesion molecules [BR:
cgib04515
]
Cadherins
Protocadherins
127971911
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Motif
Other DBs
NCBI-GeneID:
127971911
NCBI-ProteinID:
XP_052431198
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Position
B14:complement(27323490..27335567)
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AA seq
1028 aa
AA seq
DB search
MFVFLLLLCLADGVVSQIRYSVPEEAEHGTFVGNIAEDLGLDLTKLSSRRFQVVPSSRTP
YLEVNLENGVLFVNDKIDRERICKQSASCLLHLEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITSNNYFYLDVQTQTDGNKFSE
LVLEKPLDREQQAMHRYVLTAVDGGQPPRTGTALLVVRVLDSNDNVPVFDQPVYSVNLAE
NAPVGSLVIQLNATDSDEGPNGEVIYSFSNHISGNVKELFDIDARTGRIEVRGEVDFEES
SLYQIYVQAKDMGPNAVPAHCKVLVKVTDVNDNAPEIIFSTVTESVSENAATGTVIALLS
VTDKDSEDNGQTHVEILGDVPFKLKTSFRNYYTIVTDGPLNRETVEAYTVTVVARDKGIP
SLATSKSIKVHVSDENDNAPTFTQPIYDVYVTENNVPGAYIYAVSAVDPDVGQNAYITYS
IVECEIQGMSVVTYVSINSENGYLYALRSFDYEQLKDFSFMVQARDSGSPELWSNATVNV
IIVDQNDNAPSVIAPLGKNGTAREPLPRSAEPGYLVTRIVAMDADDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSVKRDPQQLYELLIEVRDHGQPPMSCSAVVQVTLVDSLVE
GHSGERGTARAKDASLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNIYSTCLASD
CCCLVGCGSCGSGGCCGRQARAARKKKKLSKSDIMLVQSTNTANVSVASAAQVPVEESGS
FGSLHQSQNYCYQVCLTPESAKTDLMFLKACSPSRSNDTEHNPCGAIVTGYTDQQQPDII
SNGSLLSSETKHQRAELSYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDAMHR
GHSSGADLFSNCTEECKALGHSDRCWMPSFVPTEARQGADYRSNLHVPGMDSVPDSEVFE
GETLAGDQSFSTFGKETPHHPNQMHQHQHQHHQHHLNASTLERKEFDALLCNSRMPYKAA
CLSRKRIC
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgtttttgctcctgctgtgtctcgcggatggggtagtttcgcagatacgttac
tctgtgcccgaggaagcggagcatggcacatttgtggggaatatcgcagaggatctggga
ctggacctcacgaaactttcatcccgccgctttcaggttgtgcccagctcgcggacaccg
tacctggaagtaaacttggagaacggggtgcttttcgtgaacgacaaaatcgaccgggag
cgcatctgtaagcagagcgccagctgtttgcttcatctggaggtgttcctggagaaccca
ctcgagctctttcgcgtggagatcgaggtggtggacatcaacgacaacccgccgagcttc
ccggagacagacatcaccgtggaaatatccgagagcgcgaccccgggtacgcgcttcccg
ttggagagcgcctttgatccggatgtcggtagtaacgcattgcgcacttacgacattacc
agcaacaactatttctacctagatgtgcaaacacagaccgacggaaacaaattctcagag
ctggttttggaaaagccacttgatcgggaacagcaggcgatgcaccgttacgtcctcacg
gccgtggacggcggccagcctcctcggacaggtacagctctgcttgtggtcagagtgctc
gactccaacgataacgtccccgtgtttgatcagccagtttactcggtcaacctggccgag
aacgcgcccgtgggctcgctcgtcatccagctgaacgcgactgactcagacgagggcccg
aacggagaggtcatttactcattcagcaaccacatctcaggcaatgtcaaggaactgttc
gatatcgacgcccgaactggccgtatagaggtcagaggtgaggtagactttgaggagagc
agcctgtatcagatttacgtgcaagcgaaagacatgggacctaatgccgtgcctgcgcac
tgtaaagttttggtcaaagtgacggacgtaaacgacaacgcaccggagatcatcttcagc
accgtcacggagtcggtgagcgagaacgcagccactggcaccgtcatcgcgctgctcagc
gtcaccgataaagactccgaagacaacgggcagacgcatgtggagattctcggagatgtt
cctttcaaactcaaaacctctttcagaaattattacactattgtgactgacggtcctcta
aaccgagagactgtagaggcatacacagtcaccgttgttgcgagagataaaggtattcca
tctctggctactagcaaatcaatcaaagtgcacgtgtctgacgagaacgacaacgcgcca
acgtttacgcagcccatttatgatgtgtatgtgactgaaaacaacgtccccggtgcttac
atatacgctgtcagtgcagtcgatcctgatgtcggacagaatgcttatataacttactcc
atagtggagtgtgaaatccagggtatgtctgtggtcacctatgtgtccatcaactcggag
aatgggtatctgtacgccctcagatcctttgattatgagcaactaaaagacttcagcttc
atggttcaagccagagactcaggcagccccgagctgtggtccaacgccacggtgaacgtc
attatagtggatcaaaacgataacgcgccgtctgtgattgcgcctcttggaaaaaatggc
actgcgcgggagcctttgccgcgctctgccgagccaggctacctagttactcgtattgtc
gccatggatgcagatgatggggagaacgcacgcttgtcctacagtatacagagaggcaac
gagaatgggatgttccgaatggactggcgcaccggggaattgcgcacggcccgccgggtg
tcagtcaaacgagacccgcaacagctgtatgagctgctgattgaggtaagagatcacgga
cagcctcctatgtcgtgcagcgcggtggtgcaggtgacgctcgtggacagtcttgtggag
ggccacagtggagaacgcggcacggccagggccaaagacgcgtctctggacttgacgctc
attctcatcattgctctcggttccgtttctttcatcttccttctggctatgattgtgctg
gccgtgcgctgtcaaaaagacaaaaagctgaacatttacagcacctgcctggcgagcgac
tgctgctgcctggtaggctgcgggtcgtgcgggtcaggcggctgctgcggtcgtcaggcc
cgggccgcccggaaaaagaagaagctgagcaagtcagacataatgctggtccagagcacc
aacacagccaacgtgagcgtggcgagcgcagcgcaggtgcccgtggaggagtcagggagc
ttcggctcgctccatcaaagtcagaactactgctaccaggtctgtctgaccccggaatcc
gccaaaacggacctcatgttcctgaaggcctgcagcccgtcgcgcagcaacgacaccgaa
cacaacccgtgtggagcaatagtgaccggctacacggaccagcagcaaccggacatcatt
tctaacggcagcctgctctccagtgagacgaaacaccagagagcagagctcagttatttg
gtagaccgaccaaggcgtgttaacagctctgcgttccaggaggcagatatcgtgagctct
aaagacagcggccatggagacagcgagcagggagacagtgaccatgatgccatgcatcgc
ggacattcctctggagcagacctcttctccaactgcacagaggagtgcaaagccctcggc
cactcagatcgctgctggatgccaagtttcgtgcccaccgaggcacggcagggcgcagat
taccgcagcaacctgcacgtgccaggcatggactctgtgcctgactctgaggtatttgag
ggcgagacgttggcgggcgatcagtcattctcaacctttggcaaagagacgccacaccac
cccaaccagatgcaccaacaccaacatcaacaccatcaacaccacctcaatgcttccacg
ctagagaggaaagagttcgatgcacttctgtgtaactctcgcatgccttacaaagccgcc
tgtctgtcgcggaaaaggatttgctag
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