Carassius gibelio (silver crucian carp): 127971975
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Entry
127971975 CDS
T08819
Name
(RefSeq) regulator of nonsense transcripts 3B-like
KO
K14328
regulator of nonsense transcripts 3
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
cgib03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127971975
03015 mRNA surveillance pathway
127971975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127971975
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
127971975
mRNA cycle factors
P-body specific factors
127971975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
127971975
NCBI-ProteinID:
XP_052431287
LinkDB
All DBs
Position
B14:complement(22746889..22751859)
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AA seq
462 aa
AA seq
DB search
MKEDKENTRPREKKVEIKCDEIEKPEKPNKEKKEAMTKIVIRRLPPSLSKEDLVEQLQPL
PELDYMEFFSSDTSLFPHLFARAYLNFKNQDDIVLFRDRFDGYVFIDNRGQEYPAIVEFA
PFQKIAKKRSKKKDAKSGTIEDDVDYKNFLEFYNGDEEKFPSNPETLLEEIEAKTKELSS
KKTTPLLDFLKNKQRIREEKKEERRRRELERKRLRDEERRKWREEDRRKRKDAEKFKKGE
KTSDKDKDQPKDELPKIKLLKKTEKADDGDIDKPKDKPKKLEREKQKEDRLPVGGESKKR
QNGEHREEKGGKSEDSGHKNYRDRDGDRDRDRERERRQKEKERFRRQDEERRKRERQDGE
NTYRKRDDEGKKDKERVWEKRRNENTGESSVNAHPEKPTRDNRKEDSARKDRLRNKDRPA
IQLYQPGVRSRNRGGGGPGGDGPAAEKRAERESKNTQEKAAE
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaggacaaggaaaacacgcgtcccagagaaaagaaagtggaaataaaatgtgac
gaaattgagaaaccagagaagccaaataaagagaagaaggaagctatgacaaagattgtg
attcgacgtctccctccaagtctatctaaagaagacttagtggaacaactgcagcctctt
ccagagctggattacatggagtttttctctagcgatactagtcttttccctcatctgttt
gccagagcctatctgaatttcaaaaatcaagatgacatagttctcttcagagaccggttt
gatggctatgtcttcattgataatcgaggtcaagaatatccggcaattgttgagtttgca
ccattccagaaaattgctaagaaaaggagcaaaaaaaaggatgcaaaaagtggaacgatt
gaagatgatgttgattacaaaaattttttggagttctacaatggtgacgaggaaaaattt
ccttccaaccctgagactttacttgaggaaattgaggccaagactaaggaactcagttct
aaaaaaacaacacctctcttggactttcttaagaataaacagaggataagagaagagaag
aaagaagagaggagacggagagaactagaacgaaaacgcctgcgagatgaagaacggcgc
aagtggagagaggaggacagaagaaaaagaaaagatgctgagaagtttaaaaaaggagaa
aagacatctgataaggataaggaccaacctaaagatgaactgccaaaaatcaagctattg
aaaaaaacagagaaagcggatgacggtgatattgacaagccaaaggacaagcccaagaaa
ctagagcgagagaaacagaaggaagatcgacttcctgtaggaggagaatcaaagaagcgt
cagaatggtgaacacagagaagagaaggggggaaagtcagaggatagtgggcataaaaat
tacagagatcgtgatggggatcgagaccgggacagagagagagagcgaagacagaaagaa
aaagaacgattcagaaggcaggatgaagaacggaggaaaagagaacgtcaggatggagaa
aacacctacagaaagagagatgatgaggggaagaaggacaaggagcgtgtttgggagaaa
agaaggaatgaaaacaccggagagtcctccgttaatgctcaccctgaaaagccaacaagg
gacaacagaaaagaagacagtgccagaaaagaccgtctgagaaacaaggatcggcctgca
attcagctgtaccagcccggggtgaggagccgtaaccggggtggaggaggaccaggagga
gatggaccggcagcagagaagagagctgagcgtgagtccaagaacactcaagagaaagct
gctgagtga
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