Carassius gibelio (silver crucian carp): 127972144
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Entry
127972144 CDS
T08819
Name
(RefSeq) transcription factor HES-4-B-like
KO
K06054
hairy and enhancer of split 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03460
Fanconi anemia pathway
cgib04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
127972144
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127972144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127972144
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127972144
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
127972144
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
127972144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
127972144
NCBI-ProteinID:
XP_052431411
LinkDB
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Position
B15:complement(7094..8937)
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AA seq
291 aa
AA seq
DB search
MPADNMEKQTASPIAGAPASGSHTPDKPKNASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAALSADTNVLSKYRAGFNECMNE
VTRFLSTCEGVNTEVRSRLLNHLSGCLGQMMAMNYPQPAPAQQAHLAQPLHVQLPSTLPI
NSASMGPKLSPSEVVSPKVFGGFQLVPATDGQFAFLIPNPAFASATNPVIPLYANAGVPM
TVNASPLQASSAPTVASPIQGMTSFAGVSQAVSPVGVSAGAESNEPVWRPW
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgataatatggagaagcagaccgcatcaccgattgctggtgcccctgccagt
ggatctcatactccggacaaaccaaagaatgccagcgagcacagaaagtcttcgaagcca
atcatggagaaacgccgtagagcgagaataaacgagagccttggccagctgaagaccctg
attcttgatgctcttaaaaaagatagctccagacactctaaattggagaaagctgatatt
cttgagatgactgtcaaacacctgcgcaatttgcagcgtgttcagatgactgcagccctg
tcagctgacacaaacgtcctcagcaagtatcgcgcgggattcaacgagtgcatgaacgag
gtgactcgatttctctctacctgcgaaggggtgaacacggaagttaggtcgcgacttctc
aaccacctgtccggttgtttgggacagatgatggccatgaactaccctcagcctgcccca
gctcaacaggcgcatctggctcagcctcttcacgtgcagcttccttcaactttgcccatc
aacagcgcctcaatgggccctaaactcagtccatcggaagtggtctcacccaaagtcttt
ggaggattccagctggtgccagccaccgacggacagtttgcttttcttatccccaaccca
gctttcgcttctgctacaaacccggtcatccccttgtacgcaaacgcaggtgtccctatg
acagtcaacgccagtcccctccaggccagctcggctcccacggtggcatctcctatccag
ggaatgacctccttcgcgggcgtttcacaggccgtcagtcccgttggtgttagtgccgga
gcagaaagcaatgaaccggtgtggagaccttggtag
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