Carassius gibelio (silver crucian carp): 127972160
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Entry
127972160 CDS
T08819
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04142
Lysosome
cgib04144
Endocytosis
cgib05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127972160
04142 Lysosome
127972160
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
127972160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127972160
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgib04147
]
127972160
Membrane trafficking [BR:
cgib04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
127972160
Exosome [BR:
cgib04147
]
Exosomal proteins
Proteins found in most exosomes
127972160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
127972160
NCBI-ProteinID:
XP_052431441
LinkDB
All DBs
Position
B15:complement(16228561..16261166)
Genome browser
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMSDPNT
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTEDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPSGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKHDVVFLITKYGYIHLYDLEMGTCIYMNRISG
ETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNNLFAGGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGALSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPDRVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELIHVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMKEHLELFWSRVNIPKVLRAAEQAHLWGELVFLYDKYEEYDNAIITMMN
HPSDAWKESQFKDIITKVANVELYYKATHFYLEFKPLLLNDLLIVLSPRLDHTRAVNFFS
KVKQLSLVKPYLRSVQNHNNKAVNEALNNLFIMEEDYQALRTSIDAYDNFDNISLAQSLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLQE
DKKECFAACLFTCYDLLRPDVVLETAWRHNLMDFSMPYFIQVMREYLSKVDAITEKVDKL
DASESLRKEEEQLTEAQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYPTATGYGQPAQPGF
GYGM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctgcctatccgcttccaggagcacctgcagctccaaaacctgggcata
aacccagcgaacattgggtttagcaccctgacgatggagtcggataagttcatctgcatc
cgggagaaggtgggcgaacaggcccaggtggtgatcatcgacatgagtgatcctaatacg
cccatccgcagacccatctctgcagacagtgccatcatgaacccagccagcaaagtcatt
gctcttaaagcggcaaaaacccttcagattttcaacattgaaatgaagagcaagatgaag
gcccacaccatgaccgaggacgttacattttggaagtggatctctctcaataccgtagca
cttgtgacagacaatgcggtctatcactggagtatggaaggagactcgcagcccatcaaa
gtctttgaccggcattccagtttagcaggctgccaaattattaattaccgcactgacgcc
aaacagaaatggctgcttctgattggaatttctgcacagcaaaaccgcgttgtgggcgca
atgcaactttactccgtggatagaaaggtgtcgcagccgatcgaaggccatgctgctggc
tttgctcagtttaaaatggaggggaatgctgaggagtccacacttttctgctttgccgtt
cgggggcaagctggaggaaagttgcacattattgaggttggaacacctccgtcaggaaat
caacccttcccaaagaaagcagtcgacgtgtttttccctccagaggcacagaatgatttc
ccggttgcaatgcagataagctccaagcatgatgttgtctttctcatcaccaaatacggc
tacatccacctgtatgaccttgagatgggcacctgcatctacatgaaccggatcagtgga
gagaccatttttgtcaccgctcctcatgaagccacatctggcattattggtgtgaaccgg
aagggacaggtgctttctgtgtgcgtggaggaagaaaacatcatcccttacatcactaac
gtgctacagaaccctgatctggccctcaggatggccgtccgcaataacttggcaggtgcc
gaggagctcttcgcccgcaaattcaacaacctatttgctggtggcaactactctgaagct
gccaaagtggctgccaatgcaccaaagggcatcttgcgcaccccagacaccatccgtcgg
ttccagagtgttcctgcccagcccggtcagacgtctcctctgctgcagtactttgggatt
ctgctggatcagggccagctgaacaagtttgagtcattggagctttgcaggcccgtcctg
cagcaaggccgcaaacagctcctggagaaatggctaaaggaagacaagctggagtgctct
gaagagttgggtgatctggtgaagtctgtggatccaactcttgctcttagcgtttatcta
agggccaacgttcctaacaaagtgatccagtgtttcgcagagaccgggcagttccagaag
attgtactgtatgccaaaaaggttggctacactccagactggatcttcctgttgaggaac
gtcatgcggatcagtccagaacaaggcctgcagttctcccaaatgctcgttcaggatgag
gaacctctggctgacatcactcagattgtggatgtgtttatggagtataacctgatccag
cagtgcacttctttcctgttggatgccctgaagaacaaccgccccactgaaggtcctttg
cagactcgtctgttggagatgaacttgatgcatgccccacaggttgcagatgccatcctg
gggaaccagatgttcacccactatgaccgggcccatgtggctcagctgtgtgagaaggca
ggtcttctacagagagctctggagcactacactgacctgtatgacatcaaacgggccgtt
gtccacacccatctgctcaatccagagtggctggtgaacttcttcggtgctctgtcggtg
gaggactctctggagtgtctgagagccatgctttctgctaacatcaggcagaacctccag
atctgcgtccaggtggcctccaagtatcacgagcagctctccacccagtcgctcacagag
ctctttgagtccttcaagagctttgagggtctattctacttcctgggctccattgtaaac
ttcagccaggatccagaggttcacttcaaatatatccaggctgcttgtaaaactggtcag
atcaaagaagtggagagaatctgcagagagagcaactgttacgatcctgatcgtgtgaag
aatttcctcaaggaagccaaactgaccgaccagctgcccctcatcattgtgtgtgaccgc
tttgactttgtccatgaccttgtgctctacttataccgcaacaacctccagaagtacatc
gagatctatgttcagaaggtgaaccccagccgtttacccgtggtgattggagggctgctg
gatgtggactgctctgaagacgtcattaagaacctcattctggtggtcaggggccagttc
tctactgatgagcttgtggccgaggtggagaaaagaaacagactgaagctgcttctgccg
tggttggaggcccgtatccacgagggctgtgaggaacctgctacccataatgccctggct
aagatctacattgacagcaacaacaaccctgagcgcttcctccgagagaacccctactat
gacagccgtgtggtgggcaagtactgcgagaagagggatcctcatctggcctgtgtggct
tatgagagaggacagtgtgaccaagagctcatccatgtttgcaatgagaactcgctcttc
aagagtctgtcccgataccttgtgcgtcgtaaggaccccgagctgtgggctagtgtgctt
ctggaaagcaacccttacaggcgacccctaatcgaccaggttgttcaaactgccctctct
gagacccaggaccctgaggaagtgtccgttactgtcaaagctttcatgactgctgaccta
cccaatgaactcattgaacttctagagaagattgttttggacaactccgttttcagtgaa
caccggaacctgcagaacctcctgatcctgacggccatcaaagctgaccgcactcgtgtc
atggagtacatcaaccgcctcgacaactacgacgccccagacatcgctaacatcgccatt
agcaatgagctcttcgaggaggcttttgcgatcttcaggaagttcgatgtgaacacatca
gcagtgcaggttcttattgagcacattggaaatcttgaccgggcctatgagtttgcggag
cgctgtaatgaaccggccgtgtggagtcagctggctaaagcacagctgcagaaggggctg
gtgaaagaggccattgactcttacatcaaagctgatgacccctcggcctacatggaagtg
ggacaagctgcagcccaaagcggaaactgggaggatctggtcaagtttctgcagatggct
cgtaagaaggcccgtgaatcgtatgtagagacagagctgatctttgcccttgccaagact
aaccgtctggctgaactggaggagtttatcaatggaccaaacaacgcacacattcaacaa
gttggtgaccgatgctatgacgagaagatgtacgaggcagctaaactactttataacaat
gtatccaacttcggccgtctggcctccactcttgtgcatcttggcgagtatcaggctgct
gtcgatggggcccgcaaagccaacagcacaaggacctggaaagaggtttgctttgcctgt
gttgatgggaaggagtttcgtctggctcagatgtgtggattgcatattgtcgttcatgct
gatgaacttgaggagctcatcaactactaccaggaccgcggctatttcgaggagctgatc
accatgctggaggcggcgctggggctggagcgcgctcacatgggcatgttcacagaactg
gccatcctctactccaaattcaaaccacagaagatgaaggagcacctggagctcttctgg
tccagagtcaacattcccaaggttttgagggcagcagagcaggctcacctgtggggagag
ctagtcttcctgtatgataagtatgaggagtatgacaacgccatcatcaccatgatgaac
catccttcagatgcctggaaggagagccagttcaaggacatcataaccaaggttgcgaac
gttgagctgtattacaaagccacccacttctacctggagttcaaaccgctgttactgaat
gacctgttgattgtactttccccgcgtcttgaccacactcgtgctgtcaacttcttcagc
aaggtcaaacagttgtcgttggtgaaaccctacctgaggtctgtacagaaccacaacaac
aaggctgtaaatgaggcactaaataatctcttcatcatggaggaggattatcaggctctg
cgcacatccatcgatgcctacgataactttgataacatatccctggctcagagcctagag
aagcacgaactcatcgagttcaggcgaatcgccgcctacctgttcaaaggcaacaaccgc
tggaaacagagcgtggagctctgcaagaaagacaaactttacaaggacgcaatgcagtat
gcttcagagtcaaaggacacagagttggctgaggagctgctgcagtggttcttgcaggaa
gacaagaaagagtgttttgctgcctgcctgttcacctgctacgacctgctgaggcccgac
gtggtcctggagaccgcctggaggcacaacctcatggacttctccatgccctacttcatc
caggtcatgagggaatacctcagcaaggttgatgcaattacggaaaaggttgataagttg
gatgcttcagagtctttgaggaaagaggaagaacagctcacagaggcacaacccattgtc
tacggcacaccccagctgatgctcactgcaggccccaacgtcgcagtccccccacagcag
ccttacggctacggctaccccacggcgactggctacggccaaccagcacagccaggcttc
ggctacggcatgtaa
DBGET
integrated database retrieval system
