Carassius gibelio (silver crucian carp): 127972287
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Entry
127972287 CDS
T08819
Name
(RefSeq) nuclear pore complex protein Nup50-like
KO
K14295
nuclear pore complex protein Nup50
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127972287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127972287
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127972287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUP50
Ran_BP1
PI3K_1B_p101
Motif
Other DBs
NCBI-GeneID:
127972287
NCBI-ProteinID:
XP_052431654
LinkDB
All DBs
Position
A4:17785925..17797718
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AA seq
453 aa
AA seq
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MAKRIAEKELTDRNWDQEDEGEEAGLFSVASEDVMKNRAIKKAKRRNVGAEGESGGAFKA
FKGFSLTSATGSTLFSGFGNGAGFKPVSNLTNGSVASVAPSFAGFNVPTSAKTNSGLLTF
NSSASSKPTDDVTSNGSTPNNKEYSRQLTALNCSVRDWITKHVNDNPLCDLNPIFRDYER
HLASIEKKYGSAASESGAESVSFGGEQKQPLMSGTGASVSGTGATVSVSGAAPQLFSFKD
KDGAAADKPAAVAPPGVSFNFGQKVDSSVLGALASSAAPSFSFSSSSSSSSGVSVFGAAV
SSVSPAASSSLNTASNSQTADENGEESEEPPVPVVKEIKEKDAFYSKKCKLFYKKDGEFK
EKGVGTLHLKMVSENKLQLLVRADTNLGNILLNIMVPSSMPCSRTGKNNVMVVCVPNPPV
DDKNPSTPVPMLIRVKTAEDADELHRTLQEKKA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcggattgcagaaaaagagttgacggacaggaactgggatcaggaagatgaa
ggagaggaggcaggattattttcagttgcgagtgaagatgtgatgaaaaatcgtgccatc
aagaaagccaagcgtcgtaacgtaggagcagagggcgagagtggaggggctttcaaagca
tttaaggggttctctctgacctccgccacagggtcaacattattctcgggcttcggtaat
ggagctggtttcaaacctgtgtccaacctgaccaatggcagcgtagcatcggtggctcca
tcttttgctggttttaacgttcccacgtctgctaaaacaaacagtggtctcttaacattc
aacagctccgcctcctccaagcccacagatgatgtcacgtctaatggctccacccccaac
aataaagaatacagccggcagctcaccgcactaaactgctctgtgcgcgactggatcacc
aagcatgtcaatgacaaccccctgtgtgacctcaatcctatctttcgtgactacgagcga
cacctggccagcatcgagaagaaatatggcagcgctgcatcagaaagtggggcggagagc
gtgtcatttggaggggagcagaagcagcctctgatgagcggaacaggagcttcagtttcc
ggcacgggtgctacagtgtctgtcagcggtgcagcgccacagctcttctctttcaaagac
aaggatggggctgcagcagacaaaccagcagccgtagctcctccaggcgtctcctttaat
ttcggccagaaggtggacagctctgtgctcggtgcactcgcatccagtgcagcaccgtct
ttctcgttttcttcctcttcctcctcctcttcaggcgtatctgtgtttggagcagcggtc
agtagtgtcagtcctgcggcgtcgtcctctctgaacacagccagcaacagtcagaccgca
gatgaaaatggggaggaatcagaggagccgcctgttcctgtggtgaaagagatcaaggag
aaagacgccttctactccaaaaagtgtaagttgttttataagaaggacggagagtttaaa
gagaaaggggtgggaacactgcatctgaagatggtgtctgagaacaaacttcagctgttg
gtgcgagccgacaccaacctggggaacatcttgctgaacatcatggtgccctcttccatg
ccctgctcgcggactggcaaaaacaacgtgatggtggtgtgtgtgccaaaccctcctgtg
gacgacaagaaccccagcacgcccgtcccaatgctgatccgtgtgaaaacggcagaggac
gcagacgagctgcaccgaaccctgcaagagaagaaagcctaa
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