Carassius gibelio (silver crucian carp): 127972316
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Entry
127972316 CDS
T08819
Name
(RefSeq) synergin gamma isoform X1
KO
K25219
synergin gamma
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127972316
Membrane trafficking [BR:
cgib04131
]
Endosome - Golgi transport
Others
Aftiphilin/p200/gamma-synergin complex
127972316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EH
Motif
Other DBs
NCBI-GeneID:
127972316
NCBI-ProteinID:
XP_052431696
LinkDB
All DBs
Position
B15:16800451..16849125
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AA seq
1404 aa
AA seq
DB search
MALRPGSGGGGSFIYPVGGGVGPPQGMMPMQQQQQQQQGFPMVQVMQPNMQGMMGMNFGA
QMPGAMPIQGGMAMGMQTPGMQFMGQPQFMGMRGPGPQFPVDLQKQMAEEHQKRLEQQQR
MLEEDRKRRQFEEQKQKLRLLSSVKPKTGEKSRDDALEAIKGNLDGFSRDAKMHPTPSSQ
SKKPDSSPSHSSVTSHTLPPAFPEEDDEFSDFVQGPVDASSSFPSSSLFPSSPHTSQPLD
TGPGQHPTSSSLPHSVPPSLPVSPAIQHSSVISSSQSAFQGPSLEEKMFTSCDLTADKKA
HVSFKPHQALSELSPRVHVTAQFHSSTRARNWAQTQDDFNSAFILETAPEPLPATQAPPA
ADNPPVQPTSTSGVGVYPQQDMQPMVPAWLYNDSLIPELFMKVLEYTMTPTGIDTAKLYP
ILISSGLPREALGQIWALANRTTPGKLTKEELYTVLALIGVAQSGLTVMSLDILSQFPSP
PVPNLPAMAMAIPAVLPQHQQPIMTQPPVSMAMPVAAPPVMGITPNPPAQPPASFITNFP
PVQATKADDDDFQDFQEAPKAGAGDDSFTDFQGETGGAFPSMTSSSQSSVPAMLTPVSGS
SSSSSDKYAVFKQLSVEQPAEPTPPVSDSGDKYSVFRELEQPSDRKTVGEGFADFKSVSA
DDGFTDFKTADTVSPLDPPDQAKFQPTFPPPFSSSQSLSHSQPTSLAQPRNPLNMADLDL
FTTMAPPAPTTTGDSKLNLFPSAPPSLVLPSVTKPPSIGGDDFGDFALFGSSASSEVAPT
TSTVGRGTGMAVQDDFADFMAFGSSRDQRNETSSGDGGGEAQTETSQQRQQIGTDKYDVF
KQLSLEGGLAYDDNKESGGGSFSSLKSDNDDFADFQSSKFCTALGASDKSLVDKVAAFKQ
AKEDSASVKSLDLPSIGGSSVGKEDSEDALSVQLDMKLSDMGGDLKHVMSDSSLDLPGLS
SHQPPAAESDDLKFDPFGTSAVSSLGSYDWSDKEDLSSGQGKKHQGGLPSSAVVQRKETY
FGSSENITHTTVAKVTTFPIEDGGSTTESRFDAFADFGCIEQAGQDDNDDFGDFASTVSE
KSDSPPGTTEAEGNQGELTDEFGAFQGDKPKFGKSDFLKASTQAKVKSSEEMIKNELATF
DLSVQGSHKRSHSLGEKEIVRSIPSPAPEQPFRDRSNTLNEKPALPIIRDKYKDLTGEVE
ESERYAYEWQRCLESALQVITTANNTLNGISSSTVCTEVIQSAQGMEYLLGVVEVYRVTK
RVELGIKATAVCSEKLQELLKDISRVWNNLMGFMSLANLSPDESSLDFSSCILRPGIKNA
KELACGVCLLNVDSRSKKKDENTFGRLFKRALTKDSRSKLRAFNSETDNFKLMYGGHQYH
ASCANFWINCVEPKPPGLILPDLL
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttcggcccggatcagggggaggtggcagctttatataccctgtaggagggggc
gttggaccaccgcaaggaatgatgcccatgcagcagcagcagcaacagcagcagggcttt
cccatggtccaggtcatgcagcccaacatgcaaggcatgatgggaatgaattttggagca
cagatgcctggtgccatgccaatacagggtgggatggcgatgggcatgcagactcctggg
atgcagttcatgggtcagcctcagttcatgggcatgaggggcccggggccacagttccct
gtggacctacagaaacagatggccgaggagcatcaaaaacgtctggagcagcagcagcgg
atgctggaggaagaccggaagagaagacagtttgaggagcagaaacagaaactacgtcta
ctgagcagcgtcaaacccaaaactggggagaagagtcgtgacgatgccttagaggccatc
aaaggaaatctagacgggttcagcagagatgccaagatgcatccaacaccatcttcacag
tctaagaaaccagactcatcgccatctcattcctctgtcacctctcatacccttcctcct
gctttccctgaagaagacgatgagtttagtgactttgtgcagggccccgtcgatgcctcc
tcctcgttcccctcttcatccctctttccatcctcccctcacactagccagccattagac
acggggcctggccagcaccccacttcctcctctctccctcactctgtccctccatctctc
cctgtctcacctgccatccaacactcttctgtcatctccagctcccaatctgcattccaa
ggcccatctctggaggagaagatgttcacatcttgtgatttgacagctgataagaaggcc
catgttagttttaagccacaccaggctctgtctgaactgagtcccagagttcatgtcaca
gctcagtttcacagcagcaccagagcccgaaactgggcccaaactcaagatgacttcaat
tcagccttcatcttagagacggcacctgagcctctacctgcaactcaggctccccctgca
gcagataacccacctgtccagcccactagcaccagcggtgtgggtgtctaccctcaacaa
gacatgcaacccatggtgccagcctggttgtacaatgactcgctcatcccagaattgttc
atgaaggtccttgaatacaccatgacaccaacaggtattgacacagccaaactctaccca
attctgatatcatcgggtctgccacgggaagctctcggacagatttgggccttggccaac
cgcaccacacctggcaagctgaccaaggaagagctgtacactgttctggctttgattgga
gtcgcccagagtggtcttacagtcatgagtttggacatcttgagtcagttcccctctccg
cctgtgcccaatctacctgccatggctatggctattcctgctgtcctgcctcagcaccag
cagcccatcatgacccagccgcccgtgtccatggccatgccggttgctgcaccgcctgtc
atgggcataaccccaaacccgcccgcacaaccaccggccagcttcatcactaacttccct
cctgtccaggctacgaaggctgatgatgacgattttcaggacttccaggaagcccctaaa
gctggcgctggagatgactcattcacagatttccaaggagaaactggaggagcatttccc
agcatgacatcatcatcccaaagcagtgttcctgccatgctaactccagtgtcagggtct
tcatcctcctcctctgataaatacgcagtgtttaaacagttgtcagtggagcagcctgca
gagcccacacctccggtctcagattcaggcgacaaatacagtgttttccgagagcttgag
cagccttcagacagaaaaacagttggggagggatttgctgatttcaagtctgtcagtgcc
gacgatggcttcacagactttaaaacagccgacaccgtctctccactagacccaccagac
caggccaagttccagccaacttttcctcctcctttctcttcttctcagtctctgtcccat
tcgcagccaacctctctggctcaacctagaaatcctctcaacatggcagacctggacctc
ttcactacaatggctcctcctgctcccactaccactggtgactccaaactcaacctgttc
ccttcagcgccgccatccctggtattgccctcagttacaaaacctcctagcatagggggt
gatgattttggcgattttgctctttttggctcctcggcgtcctccgaagtagctcccacc
acctctacagtagggagaggaactgggatggcagttcaggacgactttgctgacttcatg
gcgttcgggagctcgagagatcaaagaaacgagaccagctctggagacgggggtggagag
gcccagacggagacgtcccagcagaggcagcaaatcggcactgataagtacgacgtcttc
aagcagctttcactagaaggtggcctggcctatgacgataacaaagaaagcggtgggggc
tcgttctcgtcactcaagagcgacaatgacgactttgcagatttccagtcctccaaattc
tgtacggcgctgggcgcgtccgacaagagcctggtggacaaagtggctgctttcaagcag
gccaaagaggactctgcctccgtgaaatccctggacctcccgtccattgggggcagcagc
gtggggaaggaggactcggaggatgcgctctcagtacagctagacatgaagttgtcggac
atgggtggagacctgaagcatgtgatgtctgatagctctctagatctccctggtttgtca
tcccatcaaccccctgctgcagagtctgatgatttaaaatttgacccctttggcacatcc
gctgtcagcagtcttggcagctacgactggtctgacaaggaagatctctcgtctggtcaa
ggtaagaagcaccagggaggactgccatcttcagctgtcgtccagaggaaagagacgtat
ttcgggagctcagagaacatcacccacaccacagttgccaaggtgactaccttcccaatt
gaagatggtggctccaccaccgaaagccggtttgatgccttcgccgactttggctgcatt
gagcaggccggtcaagacgacaacgatgactttggagactttgccagcaccgtttctgag
aaatccgactcgcctcctggaaccacagaagcggagggcaaccagggtgaattgacagat
gagtttggagccttccaaggtgacaagcccaaatttggcaagtcggacttcttgaaagcc
agcacgcaggccaaagtgaaatccagtgaagagatgatcaagaacgaactcgccaccttt
gacttgtctgtgcagggatcccataagcgcagccacagtctgggagagaaagaaattgtc
cggtccatcccctctcctgcccctgaacagcccttcagagaccgatccaacaccctaaat
gaaaaacctgcgctgccgatcatccgagacaagtacaaggacctcacaggagaggtggag
gagagtgagcgatatgcgtacgaatggcagaggtgtttggagagtgctctgcaggtcatc
accaccgccaataacacccttaatggcatcagcagctccacggtgtgcacagaggtcatc
caatcagcacagggcatggagtacctgctgggtgtggtggaggtgtatcgtgtgaccaag
cgtgtagagctggggataaaagccacggccgtttgttcagagaaactgcaggagctgctt
aaagacatcagccgcgtgtggaacaatctgatgggcttcatgtcactggcaaacctctct
cctgatgagagctcactggacttctcctcctgtatattgaggccaggcattaagaatgcc
aaagagctggcgtgtggagtgtgtctgctcaacgtggactcgcgcagcaagaagaaagac
gagaacacttttggacgcctgtttaaaagagcactgacaaaagacagtcgctccaaatta
agggcctttaattcggagacggacaacttcaagctgatgtacggcggtcaccagtaccac
gccagctgtgctaacttctggattaactgcgtggaacccaaaccgccgggtctcatcctg
cccgacctgctctag
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