Carassius gibelio (silver crucian carp): 127972416
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Entry
127972416 CDS
T08819
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog isoform X1
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127972416
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Others
EARP complex
127972416
Endosome - Golgi transport
Tethering complex
GARP complex
127972416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
GrpE
Laminin_II
Sec8_N
FBF1
COG3_N
APG6_N
Syndetin_C
FUSC
Med11
VPS51_Exo84_N
ING
MCPsignal
Motif
Other DBs
NCBI-GeneID:
127972416
NCBI-ProteinID:
XP_052431844
LinkDB
All DBs
Position
B15:12412765..12437365
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AA seq
829 aa
AA seq
DB search
MMEDEELEFVEDLEAILHLTPEVQVAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDDVVNNIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQKAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRHLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFQKYMGIPQIRQLSERVKAAQSELGTQILADFDESFPAQGSKKSGGPSIVLRD
ACLVANVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITRTELAKLMRTRAREIEVKLLLFAIQRTTNFEGLLAK
RFSGSTLNDGPGQKKPEMPLEPTNPFLEDEDNGSEKDEDLDRLKKPKAPDNPFHGIVSKC
FEPHLYVYIESQDKNLGELINRFVADFRAQGPPKSGTDEGGAVLPSCADLFVYYKKCMVQ
CSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTTTSSGGLTISSLLKEKEGSEVAKF
TMEELCLICSILSTAEYCLATTQQLEEKLKEKVDKTLMERINLTGEMDTFSTVISNSIQL
LVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLASTRKYFT
QFCVKFTNSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVVRKAPAS
YTKIVVKGMTRAEMILKVVMAPHEPCVVFVDNYIKLLADSNPETFQKILDMKGLKRSEQS
TMLELFRQRLPNPPSGPDSGPSLTFSAPTPEQESSRIRKLEKLIKKRIQ
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggatgaagaattagagtttgtggaagatttggaggcgatattacaccttact
ccagaagtgcaggtggccattgagcaggttttccccagccaagaccctttggatcgagcc
gacttcaatgctgttgaatacattaatacattgtttccaacagaacagtctttggcgaat
atagatgatgtggtgaataacattcgacttaaaataagacggctggatgacaacatcagg
acagtagtgaggggacagactaatgtggggcaagatggcagacaggcgctggaggaggcc
cagaaagccatccagcaactctttggcaaaatcaaagacatcaaagacaaagcggagaaa
tcagagcaaatggtgaaagagatcacacgggacatcaagcagttggaccacgcgaagcgt
cacctgaccacctctataaccaccctcaatcacctgcacatgctggctggcggtgtggac
tcacttgaagctatgactcgaaaaaggcagtatggagaggtggccaatctccttcaggga
gtagtcaacgtcctcgagcacttccagaagtacatgggcatcccccagatacgccagctc
tcagagagagttaaagctgcacagagcgagcttggcacgcagatactggctgacttcgat
gagtcttttcctgcccaggggtcaaagaaatctggaggtcctagcattgttctcagagat
gcctgcttggtggcgaatgtcctggatcctcggattaagcaggaaatcatcaaaaagttc
atcaggcagcacctttcagaatacttagtactctttcaagaaaaccaggatgtggcgtgg
ctcgacaagatagatcggcgctatgcgtggatcaagcgtcagcttgtggactatgaagag
aagtatgggcgaatgttcccggaggagtggtgcatgaccgaacgcatcgctgtagagttc
tgtcatatcaccagaaccgagctggccaagctgatgcgaacccgtgccagggagatcgag
gtcaagcttttgctcttcgctattcagaggaccaccaatttcgagggactgctggctaag
cgcttctcgggcagcactttaaacgacgggcctgggcagaaaaaacctgagatgccttta
gaaccaacaaacccttttttggaagacgaggacaacggatcagaaaaggatgaagatttg
gatagactcaagaagccgaaggccccagacaaccccttccatggcattgtgtccaagtgc
tttgagcctcatctctacgtttacatcgagtcgcaggataaaaatcttggcgagctgatc
aaccgttttgtagctgatttccgggcacagggtccccctaaatcaggtacagatgaggga
ggcgctgtgctccccagctgtgcagatctcttcgtgtactacaagaagtgtatggtccag
tgctcacaattaagcaccggagagcccatgattgctctgaccacgatcttccagaaatat
ctgcgcgaatatgcatggaagatcctctctgggaacctaccaaagaccaccaccagtagt
ggtggtctgaccatcagcagcctgctgaaggagaaagagggatcagaagtggccaagttc
acaatggaagagttgtgtcttatttgcagcatcttaagcacagccgaatactgcctggct
accacacaacagctggaggaaaagctcaaggagaaggtggacaagaccctaatggaaaga
atcaacttaactggggagatggacacctttagcacggtaatctcaaacagtatccagctc
ttggttcaggacctggatgctgcgtgtgatccagccctcacagcgatgagcaagatgccg
tggcagagtgtggaacatgtgggagaccaaagcccgtatgtgacctctgtaatcatgcac
atcaaacaaaatgtgcccatcattagagacaacctggcctccacccggaaatacttcacc
cagttctgtgttaaattcaccaactccttcattccaaagttcataaaccacctgttcagg
tgtaagccaatcagcatggttggagcagagcagttactcctggacacacattccctcaag
actgttcttctagacctcccttccattggctctcaggtggtccgtaaagccccggccagc
tacaccaaaatcgtggttaaaggaatgactcgagcagagatgatcctcaaggtggtcatg
gcccctcacgagccatgcgtggtgtttgtggacaactacatcaagctccttgctgacagc
aatcctgagactttccagaagatactagatatgaaaggtctgaaacggagtgagcagagc
accatgctggagctgttcagacagaggctgcctaatccaccatcaggaccagacagtggc
ccatcattgaccttcagcgcccccacccctgaacaggaatcttcccgtatccgcaaactg
gaaaagctcatcaaaaagaggattcagtaa
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