Carassius gibelio (silver crucian carp): 127972442
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Entry
127972442 CDS
T08819
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127972442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgib03041
]
127972442
Spliceosome [BR:
cgib03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
127972442
Complex C
U5 SnRNP specific factors
127972442
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
127972442
NCBI-ProteinID:
XP_052431887
LinkDB
All DBs
Position
B15:10778767..10791163
Genome browser
AA seq
2342 aa
AA seq
DB search
MAAAFPYRGVPGTMPPGVPPPPPAVAPVPDYMTEEKLQEKARKWQQLQAKRYSEKRKFGF
VDAQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQI
RDVPVLYHITGAISFVNEIPWVIEPVYISQWGTMWIMMRREKRDRRHFKRMRFPPFDDEE
PPLDYADNILDVEPLEAIQMELDPEEDSSVAEWLYEHQPLKDTTKYVNGTTYRRWQFTLP
MMSTLYRLANQLLTDLVDKNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDW
NEFNDINKIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFD
PLINPISHRHSIKIQEPLPDDDEEFELPEYVEPFLKETPLYTDNTANGIALLWAPRPFNL
RSGRTRRAIDVPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLF
RSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTK
ERKKSRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDSFQLSDGLQYIFAHVGQLTGMYR
YKYKLMRQIRMCKDLKHLVYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLG
NLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHL
SESWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCK
KNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYK
HDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKE
VGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVY
KWCQGINNLQDVWETAEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKN
NVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLS
FQDTATESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKC
WPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTIQWENSFVSVYSKDNPNLLFNMCGFE
CRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGS
TTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPP
VVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQ
PWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYD
KGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGT
YFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQV
QLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELDALEIETVQKET
IHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDS
HDIERYARAKFLDYTTDNMSIYPSPTGVLIALDLAYNLHSAYGNWFPGGKPLIQQAMAKI
MKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKT
FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLP
VEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQ
MVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTD
EEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQT
KEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVS
SDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGT
HQTVHLPNQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTII
ITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMV
PGQVSWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDM
YA
NT seq
7029 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcattcccctacagaggtgttcctggaacaatgcctccaggtgttcctcca
cctcctcctgctgttgctcctgtaccagattacatgactgaggagaaactgcaagagaaa
gctcggaaatggcagcagcttcaggccaaacgctactcggagaagaggaaatttggtttt
gtggatgcccagaaagaggacatgccacctgagcatgtgcgcaaaatcatcagggatcat
ggtgacatgacaaacagaaaatttcggcatgacaagagggtctaccttggagccttgaaa
tatatgccccatgcagtgcttaaactgctggagaacatgcccatgccctgggagcagatc
agagatgtccctgtgctctaccacatcactggtgccatttcctttgtaaatgaaatccca
tgggtgattgagccggtgtacatttctcagtggggtacaatgtggatcatgatgcgtcgt
gagaagcgagacagacggcactttaagcgcatgcgtttccccccattcgatgatgaagag
cctccattggattatgcagacaacatcctggacgttgagcctctggaggcaatccagatg
gagctggaccctgaggaggactcctctgtggcagaatggttatatgagcatcaacctctg
aaagataccacaaaatatgtgaacgggaccacatacagacgctggcagttcacgttacca
atgatgtctactctgtatcgattggctaatcagttgctaacagacttggtggataaaaac
tacttctacttgtttgacttgaaggctttcttcacctctaaagcgttgaacatggccatt
ccagggggaccaaaatttgagcctcttgtcagagacattaacctccaggatgaagactgg
aatgagttcaacgacatcaacaagatcatcatcagacaaccaatcaggactgaatacaaa
attgcattcccttacctatacaacaacctgccacatcatgtgcacctcacctggtaccac
acaccaaacgtggtgttcatcaagactgaggatcctgatctgcccgccttctattttgac
cctctgatcaaccccatctctcatagacactccatcaagatccaagagccactgcctgat
gatgatgaggagtttgaactgcctgagtatgttgagccattcctgaaggagacacctctc
tatactgacaacacagctaatggaattgcgctgttgtgggcacctcgtccatttaatctt
cgctcaggaagaactagacgtgccattgatgtgcctctcatcaaaaactggtatcgtgag
cattgccctgcgggccagcctgtaaaggtacgtgtgtcttaccagaagctcctgaagtac
tacgtgctgaatgctctgaaacacagaccacctaaggcacagaagaagagatacctgttc
cgctctttcaaggccaccaaattcttccagtccacaaagctggattgggtagaagtcggt
ctgcaggtgtgccggcagggctacaacatgcttaacctgctgattcacagaaagaacctg
aactaccttcacttggactacaacttcaacttgaagcctgtgaaaaccctcaccacaaag
gaacgtaagaagtccagattcgggaatgcgttccacttgtgccgtgaggttctgcgtttg
agcaagcttgtggtggatagccatgtgcagtacaggcttggaaatgttgactctttccag
ctgtcagatggactgcagtacatcttcgcccatgtcggtcagttgactggcatgtaccgc
tacaagtacaagctcatgaggcagatcagaatgtgcaaagatctgaagcatctcgtctac
taccgcttcaacacaggcccagtcggaaaaggtccaggctgtgggttctgggctccagga
tggagagtctggcttttcttcatgagaggaatcactcctcttctggagcgttggcttggc
aatcttctggccaggcagtttgagggtcgacactccaagggtgttgcaaagactgtgacc
aaacagcgtgtggaatctcactttgatctggagctgagagctgctgtgatgcatgacatc
ctggatatgatgcctgagggtatcaagcagaacaaggccagaaccatcttgcagcatctt
agcgagtcatggagatgctggaaggccaacatcccttggaaggttcctgggcttccaacc
cccattgagaacatgattctccgctacgtgaaggccaaagctgactggtggaccaacacc
gcccactacaaccgtgagagaatcagaagaggagccactgtggataagactgtctgcaag
aagaacctgggacgtctcactcgactctatctaaaggcagagcaggagagacagcacaat
tacctgaaggatggaccttacatcacagctgaggaggccgtggccatctacaccaccaca
gtgcactggttggagagtcgtcgattctctccaatccccttccctcctctgtcttacaaa
catgacactaagctgctcatcctggctttggagagactcaaggaggcttacagtgtgaag
tcgaggctgaaccagtcacagcgtgaggagttgggtctgattgagcaggcctatgacaac
cctcatgaggctctgtccagaatcaaacgtcacctcctcactcagagagccttcaaagaa
gtgggcattgagttcatggacctttacagtcacttggtgccggtttatgatgttgagcct
ctggaaaaaattaccgatgcatacctggatcagtacctctggtatgaagcagacaagcgg
agactttttccaccctggatcaaaccagctgatacagagccgcctccactgctggtgtac
aaatggtgccaaggaatcaacaacctgcaggatgtgtgggagacggcagaaggcgaatgc
aacgtcatgctggagtctcgctatgagaagatgtatgagaagattgacttgacactcctg
aacaggcttctacgtctcattgttgaccacaacattgccgattacatgacagccaaaaac
aacgttgtcattaattacaaggacatgaaccacacaaactcgtatggaatcatccgcggc
ttgcagtttgcgtctttcattgtgcagtactatgggctggtgatggacctgctggtgctg
ggtctgcacagagccagtgagatggctggacctccacagatgcccaatgacttcctcagc
ttccaggacacagccactgagagtgcccatcctatacgtctatactgcagatacatagac
cgcattcacatctttttcagattctctgctgatgaggcgagagatctgatccagaggtac
ttgaccgagcacccagaccccaacaatgagaacattgttggctacaacaataagaaatgc
tggccccgagatgctagaatgagactgatgaaacatgatgtgaacttgggccgtgctgtg
ttttgggacatcaaaaatcgcctgcctcgttctgtgaccacaattcagtgggagaacagc
tttgtgtctgtgtatagcaaggacaaccccaacctactcttcaacatgtgtggctttgag
tgtcgtatcctccccaagtgccgcactagttatgaggagtttacgcacaaagatggagtg
tggaatttgcagaacgaggtaacaaaggaaaggacagcacagtgtttcctgcgtgtagat
gatgagtccatgcagaggttccacaacagagtgcgacagattctgatggcttcagggtcc
accaccttcaccaagattgtgaacaagtggaacactgctctgattggtctgatgacatac
ttccgcgaagctgtggtcaacactcaagagcttttagacctgctggtgaagtgcgagaat
aagatccaaacgcgtatcaagattggattgaactccaaaatgcctagtcgtttccctcct
gtggtgttttacacccctaaggagttgggagggctgggaatgctttccatgggacacgta
ctgattccacagtctgaccttaggtggtccaaacagactgatgtgggcatcactcatttc
cgctctggtatgagtcatgaggaggatcagctgattcctaatctgtaccgctacatccag
ccgtgggagagcgagttcattgactcccagagagtttgggccgaatacgccctcaaacga
caagaggccattgctcagaacagacgtttgacactggaggacctggaggactcctgggac
agaggtattccacgtatcaacacactcttccagaaggacagacacactctggcttatgat
aaaggctggagagtcagaacagacttcaagcagtaccaggtgttgaagcaaaatccattc
tggtggactcatcagagacatgatgggaaattgtggaatttaaacaactatcgtaccgac
atgatccaggcacttggaggtgtggaaggcattcttgagcatacgcttttcaagggaacc
tacttccccacctgggagggtctcttttgggagaaggccagtggtttcgaagagtccatg
aaatggaagaaactcaccaatgctcagagatctggtctgaaccagatccctaatcgacga
ttcaccttgtggtggtctcctacaatcaacagagccaatgtatatgtgggtttccaagtg
cagttggacctcactggaatcttcatgcatggtaaaatcccaactctcaagatctctctg
atccagatcttcagagctcacttgtggcagaagattcatgagagtgttgtcatggatctc
tgtcaggtgtttgaccaagagctggatgctttggagatcgagactgtccagaaagagaca
atccatcctaggaagtcttacaaaatgaattcctcctgtgctgacattctgttgtttgcc
tcctacaagtggaacgtctcacgcccatcacttctagcagactcaaaggatgttatggac
agcaccaccacacagaagtactggattgacattcagctcagatggggtgactacgactcc
catgacattgagcgatacgccagggccaagttcttggactacaccactgacaacatgagt
atttacccatcacccactggagtcctgattgccctggatctggcctacaaccttcacagt
gcttatggtaactggttccctggtggcaaacctctgatccagcaggccatggcgaagata
atgaaggccaacccggctctttatgtgctgagagagcgaatccgcaagggtctgcagctc
tactcttcagagcccactgagccttacctgtcttcccagaactacggagaactcttctcc
aaccagatcatctggtttgtggatgacaccaatgtgtatagagtcaccatccacaagacc
tttgaaggtaacttgaccacaaaaccaatcaatggagccattttcatcttcaaccccaga
actggacagcttttcctgaaaatcattcacacatctgtatgggcaggacaaaagcgtctt
ggacagttggctaagtggaaaactgccgaagaagtggctgccctgatccgatcactgcct
gttgaagagcagcccaaacagattattgtgaccaggaagggcatgttggatcctcttgag
gtgcacttgctggacttccccaacatcgtaatcaagggctctgagctccagctgcccttc
caggcctgtctgaaagtggagaagtttggagacctcattctgaaggccacagagcctcag
atggtcctgttcaatctgtatgacgactggctgaagactatctcctcttacactgcattc
tctcgtttgatcttaatcctgagagcactccacgtcaacaacgaccgtgctaaagttatc
ctgaagcccgataaaaccacaatcactgagcctcaccacatctggcccacactgactgat
gaagagtggatcaaagtggaagtgcaactcaaagatctcatcctggctgactacggcaag
aagaacaatgtgaatgtggcatctttgacccagtctgaaatcagggacatcatcctgggt
atggagatctctgctccatcccagcagagacaacagatcgctgagatcgagaagcagacc
aaggagcagtctcagctaacagccacacaaactcgcactgtcaacaaacatggagatgag
attatcacctccaccaccagcaactacgagacgcagaccttctcttctaaaactgaatgg
agagttagggcgatctctgctgccaacttgcacttacgtactaaccacatctacgtgtca
tccgatgacattaaagaaactggctacacttacatccttcccaagaacgttctgaaaaag
ttcatctgcatctcggatctgcgtgctcagattgcaggttatctgtatggaaccagccct
ccagataaccctcaggtaaaggaaatccgctgcatcgtgatggtgccacagtggggtacg
catcagaccgttcacctgcccaaccagcttccacaacacgagtacttgaaggaaatggag
cctcttggctggatccatacacagcccaatgaatcgccccagctctctcctcaggatgta
accacccatgcgaaggtcatggctgacaacccatcctgggatggcgagaagaccatcatt
attacttgcagtttcacccctggttcctgcacgctgacggcttacaagctgactcccagt
ggatacgagtggggtcgacaaaacacagataaaggaaataaccccaaaggttacttgccc
tctcactacgaaagagtccaaatgcttttgtctgaccgtttccttggcttcttcatggtg
cctggccaagtctcctggaactacaacttcatgggtgttcgccatgatcccaacatgaaa
tatgatctacagttggccaacccgaaagagttctaccatgaagttcacaggccatctcac
ttcctcaactttgcttctctgcaggagggtgaaatttacaatgctgatcgagaagatatg
tatgcataa
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integrated database retrieval system
