Carassius gibelio (silver crucian carp): 127972510
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Entry
127972510 CDS
T08819
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
KO
K06768
Down syndrome cell adhesion molecule-like protein 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cgib04515
]
127972510
Cell adhesion molecules [BR:
cgib04515
]
Immunoglobulin superfamily
Other
127972510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
fn3
ig
Ig_DSCAM-DSCAML_C
V-set
C2-set_2
C1-set
Pur_ac_phosph_N
Ig_5
Ig_6
V-set_CD47
Receptor_2B4
Sp38
fn3_2
ChitinaseA_N
DUF1461
Motif
Other DBs
NCBI-GeneID:
127972510
NCBI-ProteinID:
XP_052432013
LinkDB
All DBs
Position
B15:18909241..19045078
Genome browser
AA seq
2164 aa
AA seq
DB search
MTVPRRGGYERRDQSLPRFSALASPGLGLERSPGSIVTTPARSLAWPNTAQCTRRDCKTF
LRNIPAIYGMWLVTLLLLYSFQEVHSEDVVSTRLYFVNASLQRVTFSSSVGVSLPCPAGG
APHAVLRWYLATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENQAGK
IRSPSIRVKAVFREPYTVRVADQRSMRGNVAVFKCLIPSAVQEYVSVVSWEKDTVSIVPG
NRFFLTSYGALYISDVQKEDALSTYRCITKHKYSGETRQSNGARLSVLDPTETQPSVMDS
FQSGEVQVGRSIELPCIASGYPNPTIRWLKDGRPLPADSRWTRRLTGLTISDLRLEDSGN
YICEVTNSFGSKEVTGHLNVIEPLRVTLSPKNLKTGISSTVILSCAVQGSPHFTVSWFRN
TEPIVPDQHFSIQGSHNETLFITAAQKRHSGAYQCFATRKGQTAQDFSIILLEDGTPRIV
SSFSERVVAPGEPFSLMCAAKGAPPPTITWTLDDEPVARDSAHRASQYTLSDGSTVSHVN
VTNPQIRDGGVYRCAARNSAGSAEYQARINVRGPPSIRAMRNITAVAGRNTFINCRVIGY
PYYSIKWFKDGTTPLPDNHRQVVYENGTLKLSDVQKGADEGSYLCSVLIQPQLSISQTVY
VTVKVPPLIQPFDFPPTSIGKLMYIACVVSSGDMPIRITWRKDGQEIVSGTSGVTIETKE
FMSSLQISKVSLEHNGNYTCIASNDAATVSSERQLIVTVPPGFRVQPNNQDGIYGKSEVL
NCSVEGYPPPKVVWKHAKGIGNPQQYHPVPLTGRIQILSNGSLLIRHVLEEDRGYYLCQA
SNGVGSDISKSMILTVKIPAMITSHPNTTMAIKGQNKELNCTARGEYPIIIRWERGDTVI
DPDRNPRYSITTNSNEKSDEVISTLKLKPAERGDSVFFSCHAINSYGEGRGLIQLTVQEP
PDPPELEVREVKDRSMNLRWTQRFDGNSIITSYDIEYKNKSDPWELKHATRKISPTNNQA
NIVELHPASVYSIRMYSYNKIGRSQASKELTISTEEAPPDGPPMDVILQPMTSQSIRVTW
KAPKKELQNGVIRGYQIGYRENGPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQ
AFNRAGTGPSSSEINATTLEDVPSQPPQNVRAITVTSDEAVITWSEPPRMTLNGVLKGYR
VVFWSLYPDGGGCCGGQNLRLNQKWGEMQNITTIREQVELKGLEKFTNYSIQVLAYTQAG
DGVRSNVLYIQTREDHPGPPAGIKAVPSSATSVVVSWLPPIKPNGIIRKYTIYCSSPGSG
QPVRQKGAPSEYEANPELLIYRITHLTRGQQYLIWAAAVTTAGRGNISEKVTVEPAGKAP
AKILSFGGTVTTPWMKEVRLPCSSVGEPTPTIKWTKDSEDTAIPVTQDGHRNILSNGTLV
LRSVKAEDSGYYTCTATNTLGFDTIIVNLLVQVPPDQPRLTVSTTSTSSITLAWIPGDNG
GSSIRGFVLQYSVDNTEEWKDVFISSSERSFKLDNLRCGTWYKVKLAAKNSVGAGRISEI
IEAKTHGREPQFNKDQPLFTHINSTHARLNLQGWTSGGCPITAVLLEFRPKGTWAWQSVR
TNASADIFLAELREATWYELKMKTCNSAGCGNQSSQFATLDYDGSTIPPIKSARGEGDDV
KKLFSIGCPVILVTLGMALLFIIRKKRKEKRLKRLRDAKSLAEMLISSKNNRSFDTPVKG
PPQGPRLHIDIPRVQLLIEDKEGIKQIGEDKATIPVTDTEFSQSVNPQSFCTGVSVHHPA
LIQNTGPLIDMSDIRPGTNPVSRKSVKSAHSTRNRYSSQWTLTKCQASTPARTLTSDWRT
VGSQHGITVTESDSYSASLSQDTDKGRNSMVSTESASSTYEELARAYEHAKLEEHLQHAK
FEITECFISDSSSDQMTTGTNDNADSMTSMSTPSEPGICRFTASPPKPQDYDRGKNVAVP
IPHRANKSEYCNLPLYMKTDPFFRKQAELHDPCPVVPPREASIRSLAARAYHTQGRHMTL
DPSKQQALTLGHGGLSSLTSSGASGTSGPASSGAAGSSSISSGTATLPQRTLTMPSTSST
SSAPSGAAAAGAGASSSSTGGSGPTPGSSKVGGSRDSLLESSSSGLGRLQKQNAGAYSKS
YTLV
NT seq
6495 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcccgcggaggggagggtacgagaggcgggaccagagtcttccccgcttctcg
gcgctggcgagtccgggactagggctggagagatcgccggggagcatcgtcaccactcct
gcacggagcctcgcctggccgaatactgcacagtgcacacgtcgggattgcaaaacattc
ctgagaaatatacctgctatttatggcatgtggctggtaactttactcctgctgtattct
tttcaagaagtgcacagcgaggatgtggtctcgacgcggctgtactttgtgaatgcttcc
ctgcagagagtgaccttctccagctcagtgggggtgtccctgccctgtcctgcgggtggc
gccccccatgccgtcctccgctggtacctggccaccggcgacgacatctatgacgtgcca
cacatccgccacgttcatgccaacggcacgctgcagctctaccccttctccccctctgcc
ttcaacagcttcattcatgataatgactacttctgcactgccgagaaccaggccggcaag
atccgcagccctagcatccgtgtcaaagcagtgttcagggaaccttacacagttcgcgtg
gcggaccaaaggtccatgcggggcaacgtggccgtcttcaagtgcctcatcccctctgct
gtgcaggagtacgtcagtgtggtgtcctgggagaaggacactgtctccatcgtcccaggt
aacaggtttttcctgacatcatatggggccctctacatatctgacgttcagaaagaggat
gccctctctacctaccgctgcatcaccaagcacaagtacagcggagaaaccagacagagc
aatggggctcgtctctctgtgctggaccccactgaaacccagccttctgtgatggacagt
ttccagtcaggagaagtacaagtggggcgaagcatagagttgccctgcatcgcctccggt
taccccaaccccacaatccgctggttgaaagatgggaggccacttcctgctgattcccgc
tggacacggcgactaactggcctcacaatcagtgatctccgtctggaagactctggaaac
tacatctgtgaagtcaccaacagctttggttccaaagaggtcacaggacaccttaatgtc
atcgagcctctgagagtcacattgtcccctaagaacctgaaaacaggcatcagcagcaca
gtgattctgtcctgtgccgttcagggctcgccccacttcaccgtctcctggtttcgcaac
acagaacccattgtgcctgaccagcacttctccatccagggatcccacaacgagactctc
ttcatcacagcagcccaaaaaagacactcaggggcatatcagtgctttgccacccgcaag
ggtcagaccgcacaggacttctccattatactgcttgaggacggcaccccacggattgtc
tcgtctttcagtgagcgcgtagtagcccctggcgagcccttctctctcatgtgcgcggcc
aaaggtgctccaccccccaccattacctggacgttggacgacgagccggtagcgcgggac
tcggcgcaccgggccagccagtacacgctctccgacggctccactgtctcgcacgtcaac
gtcaccaacccccagatccgagacgggggcgtgtaccgctgcgccgcacgcaactcggcc
ggtagcgccgagtaccaagcgcgcataaacgtaagaggtcctcccagtatccgggccatg
cggaatatcacagctgtggctggtcgcaacactttcattaactgtcgtgtgattggctac
ccctattactccatcaagtggtttaaagatgggacaacgccgttgccagacaaccatcgt
caggtggtgtatgagaacggcactctgaagttgagtgatgtgcagaagggtgcggatgag
gggtcgtatctgtgcagcgtgcttatccaaccccagctctccattagccagactgtctac
gtcacagtcaaagttcctccccttatccagccttttgacttccctcccacctccatcggt
aagctgatgtacatagcttgcgtggtctcttccggagacatgccaatccggatcacctgg
aggaaggacgggcaggagatcgtgtcaggaacatcaggagtcaccatcgaaaccaaggag
ttcatgagctcccttcagatctccaaagtttcattggagcacaatggaaactacacctgt
attgccagcaatgatgcagcaactgtcagttcagagagacaacttatagtaacagttccc
cctggttttcgggttcagcccaataaccaagatggaatctatggcaagtcagaagttctg
aactgctctgtggaagggtaccctcctcctaaagttgtctggaagcatgccaaaggtata
gggaacccccagcagtaccatccagttccactgacaggtcgcatccagatcctgtccaat
ggttctctgctgatccgccatgttttagaggaagaccggggatattacctgtgtcaggcc
agcaatggagtggggtccgacatcagcaagagcatgatactcactgttaaaattccagct
atgatcacttcccacccaaacactaccatggccataaaggggcagaacaaggagttaaac
tgtactgcccggggcgagtaccccatcatcatccgctgggagcgaggtgacaccgttatt
gaccctgatcgtaaccctcggtactccatcactaccaattccaacgagaaaagcgatgaa
gttatttccacactaaagctgaagccagcagagcgaggggattccgtctttttctcctgc
cacgccatcaactcatacggcgagggccgagggctcatccagctgacggtgcaagaaccc
cctgaccccccagagctggaggttcgagaggtcaaagatcgaagcatgaacctgaggtgg
acgcaacggttcgacggcaacagtatcatcaccagttacgacatagagtacaagaacaaa
tccgacccgtgggagctgaaacatgccacacgtaagatctcccccactaacaaccaggcc
aatatagtggagctccacccggcgtccgtgtacagcattcgcatgtactcctacaacaag
attggacgcagtcaagccagcaaagagctgaccatcagcacagaggaagcacctcctgat
gggccacccatggatgtgattttacagccaatgacctctcaaagtatccgtgtcacctgg
aaggcacctaagaaagagctacagaatggagtgatccgtggctatcagattggttatagg
gagaatggaccgggcagtaatggacagtacagtatagtggagatgaaagccacaggtgac
agtgaggtgtacaccctggataacttgaagaagtttgctcagtatggtgtggtggtccag
gcattcaaccgagccggaacaggaccttccagctctgagatcaatgccacaacacttgag
gatgttcctagccagccgccccagaatgtacgggccattacggtgacatcagacgaggcg
gtgatcacgtggtccgagcccccaaggatgaccctgaatggggttttgaagggctaccgt
gtggtgttctggtccctctaccccgatggaggtgggtgctgtgggggccagaaccttagg
ctcaatcagaaatggggagagatgcagaacatcactaccattcgtgagcaggtggagctg
aagggtttggagaagttcacaaactacagcattcaggttcttgcctacacacaggcagga
gatggcgtccgcagcaacgtactctacatacagaccagagaagaccatcctggtcctcca
gcgggcattaaagctgtgccatcctctgccaccagtgtggtggtttcctggcttccccct
ataaagcccaatggtatcatccgaaaatacacaatttactgttccagccctggatcaggc
caaccggtgagacaaaaaggggcacccagtgaatatgaagccaaccctgagctgctgata
tacagaatcacccatctgacccggggtcagcagtatttgatctgggcagccgccgttacc
acagctggtcggggcaatatcagtgagaaggtgactgtggagcctgctggaaaagctcct
gctaaaatcctgtctttcggaggaacggtgaccactccgtggatgaaggaagttcggctg
ccgtgcagctcagtgggagagccaacacccaccatcaaatggaccaaagacagtgaggac
actgccatcccagttactcaagatggtcaccggaatattctttcaaacggtaccctggtg
ctgcgctctgtgaaagctgaggattctgggtactacacctgcacggccaccaacacactg
ggttttgacacaatcatcgtaaacctgctggtacaagtgcctccagatcaaccacgtttg
acagtttccaccacatccacttcttcaatcactctggcttggatccctggagacaatgga
ggaagttccatcagaggtttcgtgctgcagtattcagtagataacactgaggagtggaag
gatgtcttcattagctccagtgaacgatctttcaagttggacaacctgcgttgtggtacc
tggtacaaagtcaagcttgcagcaaaaaacagtgtgggagctggtcgcatcagcgagatc
attgaggccaagactcacggcagagagccgcagttcaataaagaccagcccctcttcact
cacatcaactccacccacgcccgcctcaacctccagggctggacgagcggcggctgcccc
atcactgctgtcctgctagagttccgccccaaaggcacctgggcttggcagagcgtgcgc
accaatgcctcagctgacatattcctcgccgagttgcgtgaggccacttggtatgagcta
aagatgaagacatgcaacagcgccgggtgcggaaaccagagctcccagtttgccaccctg
gattatgacggtagcactattccacctattaagtcagcacgaggggaaggggatgatgtt
aaaaagcttttctctatcggctgccctgtcatcctcgtcacactgggcatggccctactt
ttcataattcgcaagaaacgcaaagaaaagagactcaagagacttagagatgctaagagc
ttggctgagatgctcatcagcagtaagaacaatcgaagttttgacactcctgtgaaaggc
ccacctcagggaccccgactgcacatagacatcccccgcgtgcaactgctcatcgaggac
aaagagggaatcaagcagataggtgaagacaaggccaccatccctgtgacagacactgag
ttcagccaatcagtgaaccctcaaagcttctgtacgggtgtgtctgtgcaccaccccgcc
ctcatccaaaacacaggacctttgattgacatgtcagacatcaggccgggcaccaatcca
gtatcgaggaagagcgtgaagtctgcgcacagcacgagaaaccgctattccagccagtgg
actctgactaaatgccaggcgtccacacctgctcgcactctcacctcagattggcggaca
gtgggctcccagcatggcatcacggtcacagagagtgacagctacagtgccagcctgtct
caggacacagataagggacgaaacagtatggtgtccacagagagtgcgtcttccacctac
gaggagctggcccgagcttatgaacatgctaagctggaggagcacctgcagcatgccaag
ttcgagatcaccgagtgttttatctctgacagctcctctgatcagatgaccacaggcacc
aacgataatgcagacagcatgacctctatgagcacaccatccgaaccaggcatctgtcgc
ttcactgcctctccgcccaaaccgcaggattacgaccgcggcaaaaacgttgcagtgccc
attccccaccgcgccaacaagagtgagtactgtaacctccccctttacatgaagaccgac
cctttcttccggaaacaggcggagctgcacgacccctgtcctgtggtcccgcctcgcgag
gcctccattcgaagccttgccgcccgggcctaccacacacagggccgccacatgacatta
gacccctccaagcagcaggccctaacgctgggccacggtggcctgagcagcctgaccagc
tcaggggcctctggtacatcgggcccagcttcaagcggggccgctgggagctccagcatc
agctcaggcacagccaccctgccccagaggactctaaccatgcccagcacctcctccacc
tcctcggccccaagcggggcagctgccgctggagcaggagccagctcgagctccacggga
ggcagcggcccgacgcctggcagttccaaggttgggggatccagagactctctgcttgag
agcagctcgtccggcctgggcagactgcaaaagcagaatgctggggcgtactccaaatcc
tacactctggtgtag
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integrated database retrieval system
