Carassius gibelio (silver crucian carp): 127972533
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Entry
127972533 CDS
T08819
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K05636
laminin, beta 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04510
Focal adhesion
cgib04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127972533
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127972533
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
F5_F8_type_C
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
127972533
NCBI-ProteinID:
XP_052432080
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All DBs
Position
A4:complement(20694685..20719314)
Genome browser
AA seq
1766 aa
AA seq
DB search
MWIIQITALTISIALHGLAQSPNHNDKCREGSCYPASGDLLIGRAHRLTASSTCGLDGPE
TFCIDEKNYFECDSRETYNEFTSPNSHTIENVVTTFAPNRLKTWWQSENGVENVTIQLDL
EAEFHFTHLIMTFKTFRPAAMLIEHSADYGRSWQVYRYYAFNCTESYPHVPQGPIRKVYD
VICDSRYSGIQPSTGGEVIFRALDPALKIPDPYSPHIQNLLKITNLRIRMEKLHTLDDDL
FDEREEVKEKYYYALYDMVVRGNCFCYGHASKCAPVGDKAGVEGMVHSHCMCNHHTTGLN
CEECEDFYQDLPWRPAVGRETNACKRCECNHHSHSCHFDMAAYLSSGNRSGGVCDDCQHN
TEGQWCENCKPFYYKHPGRDIRDPRICEPCDCDPRGSLNGGLCDSATHVLRDMIAGQCRC
KANVEGQRCDHCKKGHYGLSDDPLGCQPCSCNPLGTFPKGSPCNIQTGSCYCKRLVTGRN
CDLCLPQHWGLSNDMDGCRPCDCDVGGALNNNCSRETGQCACKKHMFGRRCDQVHSGYYI
PALDHYIYEAEDALFGPEVKVVQRTLPLDRKPTWTGNGFVNIPEGETLRFNIYNLPRSME
YNLMIRYEPLLPDEWEKVVVQRERPRDTYPSAHCTSTYSDEQTISLHPGSRYVVLPGPVC
LEKGQNYTVKINFRQYSSYSYHTSPHTLVDSMVLLPEVQDLDLFSGGAQQWENWEMFQKY
RCMERSQGVIKIPLTNICKDFIFSVSALLHNGALECKCDPQGSLSTVCDNIGGQCRCRPN
VLGRNCDTCAPDTYLFGPSGCRPCDCNPLGSQNPFCHPTTGQCLCVPGAFGRQCGNCKPN
HWDFPQCQPCFCNGNSEQCHTVTGECLNCRGHTTGHNCERCESGYHRNTLLGSSEPCLPC
MCPNGPGSGMEFAESCYQNPSSLQMVCVCNSGYKGPKCEECASGYYGDPQVPGGRCHPCQ
CNGNINMQDPGSCDARTGACLKCLFHTDGNACQYCSHGYYGDAHTQNCRKCMCHLVGSSR
QSCADGLCECDRVSGQCPCLPGVVGQQCDRCAPNTWNINSGKGCLPCQCNPEHSYTASCD
RLTGECSCKPGFGGTTCEECRELFWGNPEVQCHACDCDPRGIATQQCDKMTGECVCVEGV
AGRRCDSCGRGYVGTFPDCGPCHHCFSEWDVNVGELTNRTQRLVDTVEDMKETGVATPYK
DIISSLDDETRQLGQILEDGKVQQMLTHMQRMLQQANEMASVLRMSIDRSEKDLENVSAD
NQHALESLKNLTEEAQNLQEISSDKQQQILNIKHSDPRGAADSIREYNKESGEAEFRVNK
AVSDPKSTVKESAQIRKAAETKLESKEEEFNRTHQLHLQRLDKIGSEMDSTDLSQLSHRL
CGGASGLDGCGNCGGLGCVSEDGMSQCGGEGCETIVTQIQETLNKVKKKDALHAIGEIGK
LSKMVSDARGHADKSKLNAQDVLVRANQSKARVEQANEELRDLIQQIRDFLTNETEPKRI
EEVADEVMKLSLPVSLPGALKNVTTEIREHVARLTQVDDILAQTAENAHTAERILQEAQA
ADERATALKQATDEVKETLEDTERAQTAASEKLKEVEKGINQTKHQIADVQSKTEATEFK
LSSSTVTLLDIEREVNELQQKTLETYSSENQTQKQTDNINAEIKHTEREFDSLMQHEYKL
ASGVIDQKGAAVFNAHQKAEQLRQEAKDLLKDATKKLQRLSELEKSFVAYQRILVEKAQE
MDGLESEARDVLQDLSQKITIYSTCA
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgtggattatccagatcacagctcttactatatctattgctttgcacggattggcacaa
tcacccaatcacaatgacaagtgcagagagggtagttgttaccctgcttcaggtgatttg
ctgatagggagagcacatcgtcttacggcctcctccacctgcggactggatggaccagag
acattctgcattgatgagaaaaactattttgaatgtgattcccgagagacgtacaatgag
ttcaccagccccaacagccacaccattgagaatgtggtgacaaccttcgctcccaaccgc
ctcaaaacctggtggcagtccgagaacggagttgaaaatgtgaccattcagctggatttg
gaagccgaattccacttcacacacctcatcatgacctttaagaccttccggccagcagcc
atgctgattgagcattcggcagattatggaaggagctggcaggtgtatcgttactatgct
tttaactgcactgaatcctatccgcacgtccctcaggggccaatcagaaaagtgtatgat
gtcatttgtgacagccgctattcaggcattcagccatcaacaggaggagaagtcatcttt
agggcacttgatcctgctttaaagattcctgacccttacagcccacacattcagaactta
ctgaagatcacaaacttgcggatacggatggaaaagttgcatactttagatgatgatctg
tttgatgagcgagaggaggttaaagagaaatactattatgctctatacgacatggttgtc
cgtggcaactgtttctgctatggccacgcctccaagtgtgcgccagtcggggataaggca
ggggtcgagggcatggttcatagtcattgcatgtgcaatcaccacaccactggactgaac
tgtgaagagtgtgaggacttttaccaagatctgccctggagaccagcagtgggcagagag
acaaatgcttgcaagagatgtgagtgtaaccatcactcgcattcctgtcatttcgacatg
gcggcgtatctgtcatcgggaaatagaagtggaggagtgtgtgatgactgtcagcacaac
acagagggccagtggtgtgagaactgcaagcccttctactacaagcaccctggcagggac
atcagagaccccaggatctgtgagccctgtgattgtgacccacgtggttctctgaacgga
ggcttatgtgacagtgctacacatgttctaagagatatgattgccggacagtgtcgttgc
aaagctaatgtggagggacaacgttgtgaccactgcaaaaagggacactatggcctcagt
gacgacccattaggctgtcagccatgcagctgtaatcctctaggtacattcccaaaagga
agcccctgtaatatacagacaggaagttgctactgcaaacgtcttgtgaccggacgaaac
tgtgacctgtgtctgccacagcactggggtctcagtaatgatatggatggctgcagacct
tgtgactgtgacgtaggtggggctttgaataataattgttctagggagacagggcagtgt
gcatgtaagaaacatatgtttggtaggcgttgtgaccaggtgcattctggatactacatt
ccggcactggaccactatatttatgaggctgaggatgctttgtttggaccagaagtaaaa
gtggttcaaagaacattacctttggatcgtaaacccacctggacgggtaatggatttgtg
aatataccagagggtgaaacactgaggttcaacatttacaatttaccacgatctatggaa
tacaacttaatgatccgctatgaaccactgttgccagatgaatgggagaaggttgtagta
cagagagagcgccccagagacacttacccatcagcacactgcacttctacatatagtgat
gagcagaccatctcactgcaccctggatccagatatgtagttctgcctggtccagtgtgt
ttggagaagggtcagaattacacagtaaaaattaacttccgccagtactcatcatacagc
tatcacacttctcctcacacacttgttgattcaatggtgcttttgccagaggtgcaagac
ctggatctattttctggtggagcccagcagtgggaaaactgggagatgttccagaaatac
cgatgtatggaacgcagccagggtgttattaaaatccccttaaccaatatttgcaaagat
tttatcttcagtgtgtcggcactactgcacaatggagctcttgagtgtaagtgtgacccc
caaggttctctgagcacagtgtgtgacaatatcggtggacagtgtcggtgtcgacccaac
gttttaggtaggaactgtgacacctgtgccccggacacctacctatttggaccctcggga
tgtagaccatgtgactgtaacccacttggctctcagaaccctttctgccaccccacgacg
ggccaatgtttatgtgtgccaggggcatttgggcgccagtgtggcaactgtaagcccaac
cattgggacttccctcagtgccagccctgcttctgtaatgggaacagtgaacaatgccac
acggttacgggcgagtgtctgaactgcaggggtcacaccacaggccacaactgtgagagg
tgtgaaagtggttatcaccgtaacacactgctgggctccagtgagccatgtctcccttgt
atgtgtcctaatggacctggaagcggaatggagtttgctgagagctgttaccaaaatccc
agctctctccaaatggtctgtgtctgcaactcaggctacaaaggacctaagtgtgaggaa
tgtgcctctggttattatggtgaccctcaggtaccaggagggcgttgccatccgtgtcag
tgtaatggaaatattaacatgcaggaccctggatcatgtgatgcccgcactggtgcctgt
ctcaaatgcctgtttcacactgatggcaatgcatgccagtactgcagtcatgggtattat
ggagacgcccatactcagaactgcaggaaatgtatgtgccatctcgtgggaagttccagg
caaagttgtgctgacggcctgtgtgagtgtgacagggttagcgggcagtgcccatgtctg
cctggtgtggtgggtcagcaatgtgaccgctgtgcccccaacacatggaacatcaacagt
ggaaaaggatgcctaccttgccagtgcaaccctgagcattcttacacagcctcgtgcgac
cggctgaccggtgagtgttcctgtaagcctggttttggaggtacaacatgtgaggaatgc
agggaactgttctggggcaatcctgaggtccagtgccacgcatgtgactgtgatccacga
ggcattgccactcaacagtgtgataagatgactggcgagtgtgtgtgtgtagagggtgta
gccggccggaggtgtgactcatgtggtcgtggctacgttgggacctttcctgactgtggg
ccctgtcatcattgtttcagcgaatgggatgttaatgtgggagagctgaccaatcgcacg
cagagactggtagatacagtagaggacatgaaagagactggtgtggctacgccctataaa
gacatcatatcaagtctggatgatgaaaccaggcagctcggacaaattctggaagatggc
aaggttcagcaaatgctcacacacatgcagaggatgctgcagcaagccaatgagatggct
tcagtcctgagaatgtctatagaccgatctgaaaaagatctggagaatgtatctgctgac
aatcagcacgctctggagagccttaaaaacctgacagaggaggcccaaaacctacaagag
atctcctctgataaacagcagcagattctgaacatcaaacattcagaccccagaggtgcg
gcggacagcatcagagagtataacaaggaatctggcgaggcagagtttcgtgtcaataaa
gctgtctctgacccaaaaagtacggttaaagagtctgctcagatacggaaagctgctgag
accaaactagaaagcaaagaggaagaatttaaccggacgcatcagctgcatttacagagg
ctggacaaaattggatctgaaatggactccacagacctttcacaactaagccatcggctg
tgtggaggggcgtctggtctagatggttgcggaaactgtggtggtctgggatgtgtgagc
gaggatggcatgtcccagtgtgggggggaaggatgtgagaccattgtgactcaaattcaa
gagaccttgaacaaagtcaaaaaaaaagatgccctgcacgctataggagaaataggcaag
cttagcaagatggtgtcagatgctcgaggacatgcagataagtccaagcttaatgctcag
gatgtgttagtgagagccaatcagagcaaggcacgagtggaacaggccaatgaggagctc
agagacctcattcagcaaatacgagacttcctcacaaacgaaactgaaccaaagcgtata
gaggaagtagctgatgaggtgatgaaactgagtttgccagtgtcactgcctggtgctctg
aagaacgtgaccacagagatccgcgagcatgtggccagactgacccaggtggatgatatt
ctggcccagacggcagagaacgcacacactgcagagagaatcctgcaagaagcacaggct
gccgatgagagagctactgcactgaaacaggccactgatgaggtgaaggaaactctagag
gatactgagcgtgctcagactgctgccagcgaaaaactgaaagaggtggagaaaggcata
aaccaaacaaaacatcaaatcgctgatgtacaatcaaaaactgaagcgactgagttcaaa
ctgagtagcagcacagtaacacttctggatattgagagagaggttaatgaactccaacag
aaaactctagaaacgtacagcagtgaaaatcaaactcagaaacaaactgataacatcaac
gcagaaatcaagcacacagaacgggagtttgactcactcatgcaacatgagtacaaactg
gccagtggtgtcatagatcagaagggagcagctgtgtttaatgctcatcagaaagctgag
caactccgtcaggaagcaaaggatctactgaaagatgccacaaagaaactacagagactg
agtgagttggagaaatcatttgtggcatatcagcgcattctggtggagaaagctcaggag
atggatgggctggagagtgaggccagagatgtactgcaagatctcagtcagaaaatcact
atctacagcacctgcgcttaa
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integrated database retrieval system
