Carassius gibelio (silver crucian carp): 127972536
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Entry
127972536 CDS
T08819
Name
(RefSeq) double-strand break repair protein MRE11 isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03440
Homologous recombination
cgib03450
Non-homologous end-joining
cgib04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127972536
03450 Non-homologous end-joining
127972536
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
127972536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cgib03032
]
127972536
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127972536
DNA replication proteins [BR:
cgib03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
127972536
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
127972536
BRCA1-C complex
127972536
NHEJ (non-homologous end-joining)
MRX complex
127972536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mre11_DNA_bind
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
127972536
NCBI-ProteinID:
XP_052432082
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All DBs
Position
B15:27134276..27455016
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AA seq
720 aa
AA seq
DB search
MFMSKGHHFQCLHSMTSAGNTMDDEDTFKILIATDIHLGFLEKDAIRGNDTFVTFDEIMK
QAVQNEVDFVLLGGDLFHDNKPSRKTMHCCMEVMRKYCMGDRPIIFEILSDQAVNFSHSK
FPWVNYLDSNLNISIPVFSVHGNHDDPTGADGLCAIDLLSCAGLINHFGRSRSVEKLEIS
PVLLQKGNTRIALYGIGSIPDERLYRMFTNNQVTMLRPKEDEDGWFNLFVIHQNRSKHGA
TNYIPEQFLDDFLDLVVWGHEHECKIAPVRNEQQLFYVTQPGSSVITSLSPGEAVKKHIG
LLRVKGKKMNLQKIPLQTVRQFFIQDVTLSEHPDLFSPEQPNVMLKVMAFCQEKVEEMLE
EAERQRLGNSLTPQKPLIRLRVDYSGGFEVFNTMRFSQKFVDQVANPKDILHFIRHREAK
DDVKEEGMDFAAILSRPTSEVLQLRVEDLVKEYFQKAEKNVQLSLLTEQGMGKAVQEFVD
KEEKDAIEELIKYQLEKTQRFLRERRVEATEEKIDEEIRQFRDSKRNTAEEDEEVQEAII
RAKAHRDCSDSVRDDDLNLSDESADIAVESDEEYTSAPTIRGRGRGSRGSSRRGRGRGRG
RGSASKSGRDGHGQKGSLSSALTSKSIMDAFQGSTQRSSRGNTPKTYADELAQCVSIGKL
LIPYSRNVTNVSFHLLNCKFLRKHEFYQFESHSDPENVYKQKDHAEKEQIKGFWNQEGRN
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtttatgagcaaaggtcatcattttcagtgtctacacagtatgacatcagctggaaac
accatggacgacgaggacacattcaagatcctcattgctactgatattcacctcggtttt
ctagagaaggatgccataagaggaaatgacacattcgtaacctttgatgagatcatgaaa
caagccgtgcaaaatgaggttgactttgttttgttgggtggggatctcttccatgacaat
aaaccgtcccgcaagactatgcactgctgcatggaggtgatgaggaaatactgcatgggt
gaccggccaatcatctttgaaatcctcagtgatcaggctgtcaatttcagccacagcaaa
tttccatgggtgaactacttggacagtaatctcaacatctccatccctgtcttcagtgtg
catggtaaccatgatgatccaactggggctgatggcctatgtgctatagacctgttgagc
tgtgctggtctgatcaatcattttggccgcagtcgctcagtggagaaacttgagatcagt
ccagttcttctgcagaaaggaaataccaggattgcactttatggaattggttccattcca
gatgagagactctaccggatgttcaccaataaccaggtgaccatgcttcgtcccaaggag
gatgaagatggctggttcaacttatttgtcatccatcaaaacaggagtaagcatggggcg
acaaactacatccctgaacagtttttggatgatttcctagatttggtggtttggggtcat
gagcatgagtgtaaaattgctccagtccgtaacgaacagcagctcttctatgtcacacaa
cccggcagctccgtcatcacctcgctgtcaccaggagaggcagtcaaaaagcacattggg
ttattgagagtgaaagggaaaaaaatgaatcttcagaaaattcctctacagaccgtcagg
cagtttttcattcaggatgtgacactctcagagcaccctgaccttttcagcccagagcaa
cccaacgtcatgctcaaagtcatggctttctgccaggagaaggttgaagagatgcttgaa
gaggcagagagacagagacttgggaattctctaactccccagaaacctctcatcaggcta
cgagtggattatagcgggggttttgaagtttttaacactatgcgctttagtcagaagttt
gtagatcaagtggcaaatcccaaagacatcctgcattttatcagacacagagaggccaaa
gacgatgttaaagaagaaggtatggactttgcggcaattctctctcgtcccacctctgaa
gtcttacagctgagagtggaagatcttgtgaaagaatactttcagaaagctgagaagaat
gtgcagttgtctctgttgacggagcaaggcatgggaaaggcagtgcaggagtttgtggat
aaggaggagaaagatgctatagaagaactcataaagtaccagctggagaaaactcaacgg
ttcctcagagaacgacgggttgaagccacagaggagaagattgatgaggagattcgacag
tttcgagactcaaagaggaacacagcagaagaggatgaggaagtgcaagaggctattatt
cgtgcaaaagctcatagggactgcagtgattctgttagagatgatgacctcaacctatca
gatgagtcagctgacattgctgtggaatcagatgaagagtacacttctgctccaacaatc
cgtggaagggggcgtggctccagaggttcaagcagaagaggaagaggaagaggaagagga
agaggttctgcctcaaagtcagggcgggatggacatggacaaaaaggatctctctcaagt
gcactgacaagcaagtcaataatggatgcattccagggttcaacccagaggtcctctcgt
ggaaacacaccaaagacatatgctgatgagctggcccagtgtgtttcgattggcaaattg
cttataccatattccagaaatgtcacaaatgtgagtttccatttgctcaattgtaaattt
ttacgaaagcatgagttttaccagtttgaatctcattcagaccctgaaaatgtttacaaa
caaaaagatcatgcagaaaaagaacaaataaaagggttttggaaccaggaaggaagaaac
taa
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