Carassius gibelio (silver crucian carp): 127972538
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Entry
127972538 CDS
T08819
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169-like
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127972538
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127972538
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
127972538
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
127972538
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
127972538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-RING_10
zf-RING_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
127972538
NCBI-ProteinID:
XP_052432089
LinkDB
All DBs
Position
B15:24470045..24482052
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AA seq
620 aa
AA seq
DB search
MKMAALRSAKPAGVGQRSAPLSLEEARCPVCSEILLEPVTMPCGHSVCLHCFQRTVKLSS
LCCPLCRLRVSSWARKQSREKSLINTELWELIRRSHPERCRRRLEQRDGQTADGDIFRAP
VPIQKSGEMRQDLEKQKIKGGSNEETEERKKKIHRKEECGMLKLCQCPFCGLSDSENEKP
VGKRTRHVSAFVRKTRCSPAFNRGCLHSSAVQRSRSCTDSEDGRGKTRGNTHHVLPDKAI
ITHSYNAGILLSSENSRSFSAPVLSLDKRHHWRGIHTSSSSLVLQTKPERSISPESNDSI
SEELNHFKPIVCSPCTPPKRLSDGRLLEPTIVKSTPRNLTRSLHKSTSYEASPTILQKWK
QIEVDRQCFKVTSKGTVTSPIAEDVSLKLSPVEEWDGRLCSCAVAKDSSQDHQCICDSSA
KDRKDKPVVCNKRRLVFDQCSKEEARARVRSTTQTITDTLSAKRPSRCEELCKPTEICEA
MLDKHAGHCNHGTKGPENFVNEPTTRSCVLNRPTSRRGKKRSHKTKHLEDTLQTKVSRTD
VCDRLDEMIVQRMNREKEDRELALKLQRQFDRERQKVDRHKTSRNKYELRSWATHDGMVG
HNTRRSGRISKRNEHFNYSC
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggcggcgctgaggtccgccaaacccgctggagtggggcagaggagcgctcct
ctgagtctggaggaggcccggtgcccggtgtgctccgagatcctgctggagcctgtgacg
atgccttgtggacactcggtgtgcctgcactgcttccagcgcacggtgaagctgagcagc
ctgtgctgtccgctgtgccggctgcgggtgtccagctgggcccggaaacagtcccgggag
aagagcctgatcaacaccgagctctgggagctgatccgccgcagccatccggagagatgc
cggcggaggctggagcagagagacggacagaccgccgacggagacattttccgtgcacct
gtaccaattcagaaatctggagaaatgcgtcaagatttggagaaacaaaagattaagggt
ggaagcaatgaggaaaccgaagagagaaagaaaaaaatccacagaaaagaagagtgtggg
atgctgaagctttgtcaatgtcctttctgtgggctgtcagactcagagaatgaaaagccg
gtgggaaagaggacaagacatgtgtcagcatttgtgcgaaaaacaagatgctcccctgct
ttcaatagaggctgtcttcatagcagtgctgttcagaggagcaggagctgtacagattcg
gaggatggaagaggaaaaaccagaggaaacacacatcatgtccttcctgacaaggctatc
atcactcatagttacaacgctggaatccttctctcctcagaaaacagtcgttctttttca
gccccggtgctgagcctagataagagacaccactggcggggcatccatacctcatcctcg
tcgctcgtacttcaaacgaaaccagagaggtccattagccccgagagcaacgacagcata
tcagaagaactcaaccatttcaagcctattgtctgctcgccgtgcactccacccaaaagg
ctttccgatgggcgactgttggagcctacgatcgtgaagtcaaccccaaggaacttgaca
cgctctctgcacaagtccacaagctacgaggccagcccgaccatcttgcagaagtggaag
cagattgaagttgatcgtcagtgcttcaaggtgacctcaaaaggtacggtcacgagtccg
atcgcagaggacgtaagccttaaactgagtccggttgaagaatgggacggccgactctgc
agctgtgctgtagccaaggacagctcgcaagatcatcagtgcatttgtgattcaagtgct
aaggatcggaaggataaacctgtagtctgtaataaacgacggcttgtatttgatcaatgt
agcaaagaggaagctcgtgctcgcgtcaggtcgacaactcaaaccattacagatacttta
tccgcaaaaaggcctagcagatgtgaagaactctgtaaacccacagaaatttgtgaagcg
atgcttgataaacacgctggacactgtaatcacggtactaaaggcccggagaatttcgta
aatgagcctaccaccaggagctgtgtacttaacagacctacctcaagaaggggcaagaag
agaagccacaaaaccaaacatttggaagacaccctacagacaaaagtgtcccggacggat
gtctgtgacaggcttgatgaaatgattgtccagcgaatgaatcgggaaaaggaggatcga
gaactggcactaaagctacagagacagtttgacagagagcgtcaaaaagtggacaggcac
aaaacgagtcgtaacaaatacgaactccggtcctgggctacacatgatgggatggtagga
cataatacacgcagatcaggaagaatctccaaaagaaatgagcactttaactacagctgt
tga
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