Carassius gibelio (silver crucian carp): 127972704
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Entry
127972704 CDS
T08819
Name
(RefSeq) sodium-dependent serotonin transporter-like
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127972704
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgib02000
]
127972704
Transporters [BR:
cgib02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127972704
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
127972704
NCBI-ProteinID:
XP_052432389
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Position
B15:10599125..10613428
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AA seq
645 aa
AA seq
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MEMKQSEMMNREDGGEHEKEQESQENGRLVADSVAEKGQKSCSGPGQVSNGYPSTSPQSP
RDGAGAGTGGSTPGAFRTLVVQQTSLDPPRETWSKKMDFLLSVIGYAVDLGNVWRFPYIC
YQNGGGAFLLPYLLMAVFGGVPLFYMELALGQFHRSGCISIWKHICPIFKGIGFAICIIA
LYIAFYYNTIMAWALYYLLSSFRATLPWTTCTNQWNTPNCTQYLSTDLNVSWTDNSISPA
EEFYVRQVLQVHLSPGLHQLGWVSWQLALCLLFIFTVVYFSIWKGVKTSGKVVWVTATFP
YLVLLILLIRGATLPGAWRGVVFYLKPDWSKLLTTTVWLDAAAQIFFSLGPGFGVLLAFA
SYNPFHNNCYKDALITSSVNCLTSFLSGFVIFTVLGYMAEMRQQRVENVAKDAGPSLLFI
IYAEAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPHLLARRREWFVLG
LVCVCYLGALSTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGTTRFCNDVQLM
LGFAPGVFWRVCWVAICPCFLLFIIGSFLAFPPEVKLFDYLYPFWTTVLGYCIGVSSFIC
VPSYMVYHLITTKGTFKQRLLKGITPEAPGSSGPQRDTIVITNAV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaagcaatcagagatgatgaatcgagaggatgggggagagcatgagaaggaa
caggagtcacaagaaaacggaaggcttgttgcggacagcgttgcggagaagggtcagaaa
tcctgctctggacctgggcaggtctccaacggttatcccagcacatccccacaaagcccc
agggatggtgcgggtgctgggacggggggtagcacccctggagcattcaggactctggtg
gtccagcagaccagcttggatccacctagggagacctggagcaaaaagatggacttcttg
ctgtcggtgatagggtatgcggtggacctgggcaatgtgtggcgctttccctacatctgc
taccaaaacggagggggtgcctttcttctgccgtacctgctgatggctgtgtttggtggc
gtgccgctgttttacatggaactggctctgggccagtttcaccgcagcgggtgtatttcc
atctggaaacacatttgccccatcttcaagggtataggctttgctatctgcatcattgca
ctctacattgccttctactacaataccataatggcctgggctctctactacctcctgtcc
tcctttcgtgccacactgccctggaccacctgcaccaaccagtggaacactcccaactgc
acccaatacctgtccaccgacttgaatgtctcctggaccgacaactccatctctccagct
gaagagttctatgtacggcaggtcctgcaggttcatctgtcccctggtcttcatcagttg
ggctgggtgagctggcaactagccctctgtctgttgttcatcttcactgttgtgtacttc
agcatctggaaaggggtcaagacctccggcaaggtagtgtgggtgacagcaacctttccg
tacctggtgctgctgatcctgttgataagaggggccaccctgccgggagcatggagagga
gtggtcttctacctgaaacctgattggagcaaacttttaaccactacagtttggcttgat
gcagctgcacagatcttcttctctctgggtccaggctttggtgttctcctggcctttgcc
agctacaatccctttcataacaactgctacaaagatgcattaatcacaagctcagtgaac
tgtttgaccagtttcctgtcaggctttgtgatcttcactgtgctgggctacatggcagag
atgcgccaacaacgtgtggagaacgtagctaaagatgctggtcccagtctgctcttcatc
atctatgccgaggctatagccaatatgccggctgctacattcttcgccatcatattcttc
ctcatgataattatgctggggctggatagcacgtttgcaggtctggaaggggtaattaca
gccatgttggacgagttcccccacctgttggccaggaggagggaatggtttgtgctcggc
ctagtgtgtgtctgttatttgggcgccctctccactcttacctacggaggtgcgtttgtt
gttaaactattcgaggagtatgccacaggccctgctgttatcaccgtggtcttcctcgag
gtcatcgctgtttcctggttctatgggacgacacgtttctgcaacgatgtgcagctgatg
cttggctttgctcctggggtgttttggagggtctgctgggtagccatctgtccctgcttc
ctattgttcattattgggagtttcctggcattccctcccgaggtcaagctgtttgactac
ttgtaccctttctggaccacagttctcggctactgtattggagtctcctccttcatctgt
gtgccttcttatatggtctaccatctaatcaccaccaaagggaccttcaaacagcgtctg
ctaaagggcattacccctgaggctccggggtccagcggccctcagagagacacaattgtc
atcaccaacgccgtgtga
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