Carassius gibelio (silver crucian carp): 127972775
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Entry
127972775 CDS
T08819
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03015
mRNA surveillance pathway
cgib04261
Adrenergic signaling in cardiomyocytes
cgib04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127972775
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cgib01009
]
127972775
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgib03019
]
127972775
03036 Chromosome and associated proteins [BR:
cgib03036
]
127972775
Protein phosphatases and associated proteins [BR:
cgib01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
127972775
Messenger RNA biogenesis [BR:
cgib03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
127972775
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
127972775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
127972775
NCBI-ProteinID:
XP_052432543
LinkDB
All DBs
Position
A1:complement(7014054..7024261)
Genome browser
AA seq
464 aa
AA seq
DB search
MHLILCICIYTYFCMCVCFFFFFTEKMNTNLFLSFFVADVISTVEFNQTGDLLATGDKGG
RVVIFHRETESKSESEELGESGEYNVYSTFQSHEPDFDYLKSLEIEEKINKIRWLPQQNA
AHFLLSTNDKTIKLWKVSERDKRPEGYNLKDEEGRIKDISTVTSLQVPVLKPTDLMVEVR
PRRIFANGHTYHVNSISVNSDGETYLSADDLRINMWHLDITDRSFNIVDIKPANMEDLTE
VITAAEFHPQHCHLFVYSSSKGTLRLCDMRESALCDKHSKIFEEPEDPGNRSFFSEIISS
VSDVKFSHSGRYLLTRDYLTVKVWDLNMEKGPVETYQVHEYLRGKLCSLYENDCIFDKFE
CVWNSTDSVIMTGAYNSFFRMFDRETGRGVTLEAWRESSKPRAVLRTRRVYTGGRRRRGD
VGVDSLDFSKKILHMAWHPAENIIAIAATNNLYIFQDRVNAENQ
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgcatttaatattatgcatttgtatttacacatatttttgtatgtgtgtgtgtttcttt
ttttttttcactgaaaaaatgaacacaaacctgtttctttctttctttgtagctgatgtc
atttctacagtggagtttaaccagacgggggatctgctggccacaggagataaggggggg
cgagtggtcatcttccatagagaaacagagtctaaaagtgaatctgaagagctgggagaa
tcgggtgagtataatgtctacagcacgttccagagtcacgaaccggactttgactatctg
aagagtttggaaatcgaggagaagatcaataagatccgctggctgccacagcaaaacgct
gcccactttctcctctctaccaacgataaaactataaagttatggaaggtgagcgagaga
gacaagcggccagagggctacaatctgaaggacgaagaagggcgaataaaggacatctcc
accgtgacctcactacaggtgccggtcctgaagcccactgacctgatggttgaggtgcgg
ccgaggagaatctttgccaacggccacacctaccacgtcaactccatctcagtcaatagc
gatggcgagacatatctgtctgctgatgatctcaggatcaacatgtggcacctggatatc
acagatcgaagcttcaacattgtggacattaagccggctaatatggaggacctgacggag
gtaataacagctgcagagttccacccacagcactgccacctgtttgtatacagcagcagt
aaaggcacgctacgcctctgtgacatgagagagtctgcactctgtgacaagcactccaaa
atctttgaggagccagaggacccaggcaatcgatctttcttttctgagatcatctcgtcg
gtttctgatgttaagttcagccatagtggacgctatctgctcaccagagactacttgact
gtcaaagtatgggacctcaacatggagaagggcccagtcgagacctaccaggtgcatgag
tacctaagaggcaaactctgctctttgtatgaaaacgactgcatctttgacaagtttgag
tgtgtctggaatagcacagacagtgtaatcatgacaggagcatataacagttttttccgg
atgtttgatcgtgagaccggtcgcggtgtaaccctcgaggcatggcgtgagagcagtaaa
ccgcgtgccgtgctgcggactcgccgcgtttacaccgggggccggcgtcgccggggggac
gtgggcgtggacagtctggacttctctaaaaagattctgcacatggcttggcacccggct
gaaaacatcatcgccatcgcagccactaacaacctctatatctttcaggacagggtcaat
gcggaaaaccagtga
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