Carassius gibelio (silver crucian carp): 127972809
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Entry
127972809 CDS
T08819
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127972809
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127972809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
127972809
NCBI-ProteinID:
XP_052432566
LinkDB
All DBs
Position
B15:complement(19817827..19863240)
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AA seq
770 aa
AA seq
DB search
MAAMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASIIRLTISYLHMRHFASQGDPPWSPLLEGENNCNKVRRTSHSLV
TDIFEQHLGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIRPHLRAEAGCQTSHESASSSASTSSLAGTPEPAPSSPCSPGGELSERGFF
IRMKSTLTKRGLHVKSSGYKVIHVTGRIRCRPALVPGSSRPLHRPMGLVALAHTLPPSTL
NEVRMESQMFVFRVNMDLQVTYCENRISDYMDLSPTEVVGRTCYHFIHAEDLDTIRQSHE
DLLRKGQVVTGYYRWLQRRGGYLWIQSCATVSINHKAPHERNVIWVNYVLSRPELADMPL
DLLQLPESLRAERLQASSSPRDTSPKAQGSAGTQPLKGRTETDHKGKEAFSNTAASRPEN
TRKRSHQSNAESGPPEVRRRMEVFRQREESPCTSSDQASDSEVEEDDERESEWDHNPSRK
RVKSEEGQLKQGNGANGASKIHNGRAVIQHLKSVVTSSGSNIKTEQEVMGTSVGAGSGRR
WSQAQPSSGGTNGSSPPSQPQNSTSTEAPSKGLFNPPSPTLSPSILASSLPRDDRSMHGG
RAPDFELLQRLTASGAAGRVLFHPLAIGPQGPQSLYAPSTIRYAPPEMPTAHAEGHRSDH
VAKTPTFFPHLQRIASLPPFSGFSPAEPTFPPTLPFCMNGLRGMAGTDED
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcggccatgccgttcgtcagcgagggcaagtgtgtgagcgtggagtgggacttccta
caggggctgctcgccaaaccacccaccttaccctgcttgcagaacttgaggaaggagaag
tctcgcaatgcagctcgttctcgacggggtaaggagaactttgagttcttcgaactggcg
aaaatgcttcccctccccggggcaataaccagccagctggacaaggcctccatcatccgc
ctcaccatcagttacctgcacatgagacactttgccagccagggagacccaccctggagc
cctctactggagggggagaacaactgcaacaaggtgcgaagaacaagccattcgttggtg
actgacatatttgaacagcacctgggagctcatcttctacagtctctggatggatttgtg
ttcgtggtcagtcaggaaggacgatttctttatatctcagagactgtttccatctacctt
ggcctttcacaggttgagttgactggcagtagtgtgttcgattacatccaccctgcggat
catgttgagatggcagagcgtcttggcattaggccacacctccgagcagaggcaggctgt
caaacatcccatgagagcgcttcaagctccgcctccacatcctcgctggccggcactcca
gaaccagcaccatctagtccctgttctccaggaggtgagttatcagaacgtggattcttc
atcaggatgaaatccaccctcaccaagcgtggcctccacgttaagtcctcgggctataaa
gtgattcatgtgacaggtcggattcggtgtcggccagccctggtgccaggctcctcccgc
cccttgcatcgaccaatgggattggttgctctggctcacacgcttccaccctccacactc
aatgaggtgcgcatggaaagtcaaatgtttgtcttcagagtcaacatggacctgcaggtc
acctactgtgagaacaggatttcagattatatggatctgagcccaactgaggtggtggga
cgcacctgctaccatttcatccatgcagaagacctggacaccatcaggcagagccatgaa
gacttgctgcggaaagggcaggttgtgacggggtattatcgctggttgcaaaggagagga
gggtatctgtggatccagtcctgtgccaccgtgtccattaaccacaaagcgccccatgag
cgtaacgttatctgggtcaactatgtgctcagtcgaccagagctggcagacatgcctttg
gacttattacaactcccagaaagcctgagggcagagaggcttcaagcaagctcctcccca
cgtgacacctctccaaaggcacaaggctccgcagggacacagccattgaaaggcaggacc
gagacagaccacaaagggaaggaagccttctcaaacactgctgccagtcgaccagagaac
accagaaagagatcgcaccagtctaatgctgaaagcggtcctcctgaggtgaggaggcgg
atggaggtttttcggcagagagaggaaagcccatgtacctcctcggaccaagccagtgac
agtgaggtggaagaggacgatgagagggagagcgagtgggaccacaacccctccagaaaa
cgggtgaagagcgaagaggggcagttgaagcaaggcaacggggccaatggagcaagtaag
atccacaacggtcgtgcagtgatccagcatcttaagagtgtggtgaccagttccgggtcg
aatattaagactgaacaagaagtaatgggaacaagtgtaggtgcaggttctggaaggcgt
tggagccaagctcaacccagcagtggagggaccaatggcagcagtccaccttcccaacct
caaaactcgacctcgacagaagctccatccaagggcctgttcaacccaccctccccgacc
ctgtcgccatccattctggcctcatccctgcccagagatgatcggtccatgcacggaggg
cgtgctccggacttcgaactgctgcagagactcactgctagtggggctgcaggacgtgtg
ctgtttcatcccctggctataggcccacaggggcctcagagtctctatgctcccagcact
attcgctacgccccacctgagatgcctacagctcacgctgaagggcaccgctcagaccat
gtggccaaaactcctactttctttccccacttgcaaaggatcgcctctctgcctcccttc
agtggattttctccagctgaacccacttttcctccaactctgcccttctgtatgaatgga
ctgaggggaatggcagggacagatgaggattga
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