Carassius gibelio (silver crucian carp): 127972824
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Entry
127972824 CDS
T08819
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127972824
04121 Ubiquitin system [BR:
cgib04121
]
127972824
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
127972824
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127972824
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
GAGA
hAT-like_RNase-H
Motif
Other DBs
NCBI-GeneID:
127972824
NCBI-ProteinID:
XP_052432606
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Position
B15:21160265..21162950
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AA seq
623 aa
AA seq
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MALVLVAKKGTTSPIWHFFGFRPDERGQPRDLTEAVCKICSCVIRAKDGQTTNLHDHLRV
RHPAEYATLPARAGPSKKASQGQQTITGAFAKGTKYKTDSDRWRQLTDAVTRFLAKEMVS
FNTVEKPSFKAMLHTFDKQYELPGRKYFSKTAIPNLFNEVRSNIMKGLGDVEYLALTTDM
WSSCNMMPYMSVTAHYINKEWTLQSKCLQTCFMPESHTADNLEEALREAINDWKLQEKQI
ACITTDNGANIVAAIRQLKWPWLSCFGHNLNLAINNSLAQQRASTDRAFGVCRAVNTAFS
HSWLRRRELQKAQVEMKLPEHSLITDCATRWGSKQQMVERILEQEQAIKRVLTQDKSRRP
LPQLTWQDMTVLESVNNALKPVADFTDILSGENYVTVSSLLPMLAHLEGVLEESVDDSKL
TADLKRVILEQMEGRYGDDTIQRMMRKATLLDPRYRGDHMKPPELHSTKSEIMEETVREI
DLSLPRPTPGPSHAGEDVEEPDAGVATVPKKKKWSLGSLLAKRAATAAAAKPTDEQKVES
EMTIYLQEMAIDGEEDPLTWWKTNEKRFPFMARLARKYLCICATSTPSERVFSTAGSVVT
PIRSLLKPDKVNMLVFLARNIEI
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggtattggttgctaaaaaaggtactacttcgcctatatggcatttttttgga
tttagacctgatgagagagggcagccaagggacctgactgaagctgtgtgcaagatctgc
tcatgtgtcatccgcgcaaaagatgggcagacgaccaatcttcatgaccacttgcgtgtt
cgccatccagcagaatatgccactttgcctgcacgtgctggacctagcaaaaaagctagc
cagggtcagcagacgataactggggcttttgcaaaaggcactaaatataaaaccgacagt
gacagatggaggcagttgacagatgcggtaactcgcttcctggccaaagaaatggtttcg
ttcaatacagtagagaagccgtccttcaaggccatgctgcatacctttgataaacagtat
gagctgccaggtcggaaatatttctcaaagacggctatcccaaaccttttcaacgaggtt
agaagtaacatcatgaaagggctgggtgatgtagaatatttggccctgacaacggacatg
tggtccagctgtaatatgatgccctacatgtcagtgacagcgcattatataaataaagag
tggacactgcagtccaaatgcttacaaacttgtttcatgcccgagagccatacagcagat
aatttggaagaagcactgcgcgaggcaataaatgactggaaactacaagagaaacaaatt
gcctgtataactaccgacaatggggcgaatattgttgcagccatccggcagttgaaatgg
ccatggttaagttgctttgggcacaacttgaacctggccataaacaactcgcttgcgcaa
cagagggccagcacagaccgagctttcggggtttgccgggcagtcaacactgcgttttcg
cacagctggctaaggcgacgtgaactgcagaaagcacaagtggaaatgaaactccctgag
cactcactgatcacggactgtgcaacacgatggggctcaaaacagcaaatggtggagaga
attctggagcaggagcaagccatcaaacgtgtgttaacccaagacaaaagccgccgccca
ctcccccagctgacatggcaagacatgactgttctggaatctgtgaacaacgcgctgaag
ccagtagcggacttcacggacattctctctggagaaaattacgtaacggtgtcctcactg
ctgcccatgttggcccatttagaaggtgtgctggaggagtcagttgatgattccaaactg
acagccgacctgaagcgtgtcatcctggagcagatggaaggcagatatggtgatgacacc
atccagaggatgatgcgtaaagcaacgctgcttgacccaaggtaccgaggggaccatatg
aaacctccagaacttcattctacaaaatctgaaataatggaagagactgtgagagagatt
gatctgtcgctgccaaggccaacaccaggtccctcacatgctggagaagatgtagaggaa
ccagatgccggcgtcgccaccgtgcctaagaaaaaaaagtggtctttaggcagccttctt
gcgaagagagcagccacagcagctgcagccaagcccactgatgagcaaaaggtcgagtca
gaaatgaccatttacctgcaggaaatggccatcgatggggaagaggacccactgacttgg
tggaaaacgaacgaaaaaaggtttccgttcatggccagattagcacggaaatatctgtgc
atatgtgctaccagtactccttcagagcgggtcttcagcacagcggggagtgtagttact
ccaattcgcagcttattgaaaccagacaaagtgaacatgttggtatttctggccagaaac
atcgaaatttaa
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