Carassius gibelio (silver crucian carp): 127972863
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Entry
127972863 CDS
T08819
Name
(RefSeq) breast cancer type 2 susceptibility protein homolog
KO
K08775
breast cancer 2 susceptibility protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib03440
Homologous recombination
cgib03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
127972863
03460 Fanconi anemia pathway
127972863
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgib04121
]
127972863
03036 Chromosome and associated proteins [BR:
cgib03036
]
127972863
03400 DNA repair and recombination proteins [BR:
cgib03400
]
127972863
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
127972863
Chromosome and associated proteins [BR:
cgib03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
127972863
DNA repair and recombination proteins [BR:
cgib03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
127972863
FA (Fanconi anemia) pathway
Downstream FA components
127972863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
Tower
BRCA2_TR2
Motif
Other DBs
NCBI-GeneID:
127972863
NCBI-ProteinID:
XP_052432653
LinkDB
All DBs
Position
B15:complement(8749969..8764885)
Genome browser
AA seq
2710 aa
AA seq
DB search
MFDYFFHQIDKELGPLNPDWFEELTAKASRDEGRPDSSKVEEEETVKVPETSALTSQLFS
TPKIFKQLGFQSPASIPNEESPYEVANGDSSAFPWTESSPCLFGSAKDSQRFDRSSEKPR
DCFATSICDTTGLLDTPKRSLARSAKQISESLGAQINPDLSWTSSFNTPSSLTPTVILPK
TEERAPSSGLKDKEAIFVRKLFPSLSKGSASNATLSDTTLKPEAKSEPIQADDLGEKPVC
SPNTSTSSLWKQKVPCAIEDGDVRSTVQNVLDGAEDALSIFFGNSTSTLRRIKTKERIRR
RVTDSSKDVKSVVLTSEPEEKLMDDVETKSPSKNKDLIQWTPLSLSESILNGECPDSSLI
SNHNTVASSETNGDTFFNCIAGSSQTFSQSVRLKSYPEGAQCQKFLLDKSPAFMLSRKPR
KFVYQVPSSDLSDTVIGHKDTQSVCLDQMLKENPTVEEISSNLKESTVASENAVDYHTQP
QDVKRLSAEIHDLDLGLDMTQLSKAFAEDFTQEIMPKALLDVTVQCEQNGQVQSKAELEQ
KNEVGSHNDISNLADISMTSPNKSTVMLTTFEISHDSGCPTTFSDLDGTTALCADIKEFF
PSFKTANNKAISIQDEAIMKAKASLDEAAGDVLINTLNGTAPKCYQTIETLCKSDSGSTN
ANRLPTGQTIFSHHASRVCVSDAPKSDSPKSFKINISSCSSLQSNESDYKTGSKRNITVS
NVGSQTETLLKEKLGRGSDSSKCSHPNLDFKRSAERQTVFEVSSTHKSAAVNSSHGGDEE
NGTLTASQKADVTELCSLLEEANSQHEFTQFKPTNPGSDNHTEKEWDPDILNGIDFDDSF
NCDVVKGKHPVKTDTLSVNGSNRIQIEDAAKLPCAKSKKTQNAMVTLSVSEDRSLFDMKS
VQSYSSDNTPVNCFGFKTAKGTAISISEKSLNHARHFFEDDDQKAIFNREVEVDVGVIKP
EHAETEPSVNTSNSMNTKNKTYVKTKQDGNVSCGDVSRACKEINMQLAGNEGPEQNCLGE
KTDVVCVDSNSHFGFSTASGAKLKVSETALLEARRLLNDVDSLEESQTHKLVFSASGKHD
TSMSTTSLKKTKAVSWSNTSMKISQPQLVTEFSDGVDNSSFNSVKVFREQKSSSDPKEVL
AKIFSSETLSTKSEEGYGFQTASGKGVSISAGALKKAKAIFKDCDENIDLESAKMEGTNG
KLDVELKQPSSVQQPPQEVVCEEKDLQSEFSKHPSELLPPNGNCAFSTASGRKVSVSAGA
LQRAKDLLSGSVDAFSCADGSPKTKQVLDIQMDTSSIRKRKGFSTAGGKAVAISAAGLQK
AKNLFGDCEEERLSSKDLQHQCLGDLSKEPLTKVQEAFAGCSDISFSHEHETGNSTGKNT
GFSTAGGKKVTFSATALQRAKSLFKDCEEASFDSGSLQHQGCEGLSTASGKVNISEKALS
EVRATFTGYDDTSLRHGPENSSGNNIGFSTAGGKKVAVSITALQRAESLFKDCDEENVSS
KEVLPQTKCSESSEDIVDGNLKFEQINKKNYGFSTASGKGVCVSKVALEEASKLFRDCDA
QVNITDSQLLQGDSSKCRPQHKDRQIETTLHSLPSKATQNEPAKLDLHSLNFNSCTDTQQ
KYFEQEAMACTEALLADDDLNESSSLAMTEDKKSPPVNNVQTQGSFAQNRRKRPFDSRNL
ADSGQPPLKRQLLSEFDQTLDAKTTGLTPLKTCPNGTLRDRRVFSYNVHLKPNVTGPDWH
PVDQKSNNLERPCSTVSVQNRHNSDHTEGVFVPPFQKGMKTGTSNCQDVSKVSTGFIPPF
KKKNKETTEPRNQIDQNIISASHSDSVAQYCDRTSLHEGSKPKPTISVERIPLKVMDAEE
KDTEAYRETLNLARDMQDMRLRKKKKQSIRPLPGSLYLAKNSDAPRTGLRDAVGRKCPGQ
YTQEELYQHGVHLNILQITSENAESFRFDCNDFFKRELLMESGGLQLADGGWLVPDNKGT
VGKEEFYRALCDTPGVDPKLISEAWVFNHYRWIVWKRASMERTFPDLMGSLCLTPEQVLL
QLKFRYDVEVDHSKRSALRRIMERDDTPAKTLVLCVCGVAQTCQNPEKPVKDDKTPNAKM
ESCVVWLTDGWYPIKGLLDPPLTAMLNKGRLRIGDKIVSSGAELVGSQEACPPLEAPESL
MLKISANSTRRARWDTKLGYHRDPRPISLPLSSLFTAGGVVSCVNIVVLRTYPTQWMEKK
PNGVFIFRNDRAEDREARKHSNSKQKSMDLLISKIQTQFEKEMEGKNKTRERRRTFSRHE
IEALQDGEELYEAVERDLAVEAHLSARQMDAVHKYRCCLEEKRQAELQERVQKVVMEAQA
AEGGCPNRDVTPVWKLSITDANDLQSNCVYTLNIWRPSQDLYGLLREGHRYRAYHLATSE
GKKRSGIAHIQLTATKKTFFQDVEVSPEWLHQHFRARECARFRELQDPQFSSPCGEVDIV
GCIVSIEGKQGHPPLLHLVDENFDLVSVRTYSSLEQLALEELVKLRALVALSNLQMRPLS
GPVPSLYAGEQAVFSVNPKESHLQEAMICLKTFVQTCERFFSIAEEKVSDVVPSGVVGSF
RSPRTPGVQSNPKINGRVTPQQKSSVFSPFTPLNRSAPVPANSEGKDSKSLKRRRCSDYL
SRIPSPPPLTPLKSTASPYVNRTFNPPRRSVTPKPPQNESPRASRPPPGEEKWVHDEELA
MIDTQGLLEG
NT seq
8133 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactatttctttcatcaaattgacaaagagcttggacctcttaatcctgactgg
tttgaggagttgactgcaaaagcttccagagatgaaggacgtcctgacagttcaaaagtt
gaggaggaagagactgtcaaagtaccagagacatcagccctgactagtcagctgttttct
acacccaaaatattcaagcaactaggctttcagtcccctgcttccattcctaatgaggag
tctccttatgaagtggctaatggagactcgtcagcttttccctggacagaatcaagccct
tgtttgtttggttcagccaaagacagtcaaagatttgatagatcctctgaaaaacctaga
gattgctttgcaacttccatatgcgacaccacaggccttctggacacaccaaaaaggtct
ttggcacgttcagcaaaacagatatctgagagtcttggggcacaaatcaaccctgaccta
tcctggaccagttcctttaacacaccgtcctctttgactcccactgtgatattgcccaaa
acagaggaacgcgctccatcaagtggcctcaaagacaaggaagcaatttttgtgcgcaaa
ctcttcccgtctctttcgaaaggctctgcaagcaatgcaacattgagtgatacaacacta
aaaccagaagccaaaagtgagcctattcaggctgatgaccttggagaaaagcctgtttgc
tctcctaatacaagtacaagtagtctgtggaagcagaaggttccctgcgctatagaggat
ggggatgtccgcagcacagtacagaatgttcttgatggtgctgaagatgcgttgtcaata
ttcttcggcaacagcacttcaactctgcgaagaatcaaaaccaaagagaggatcagaagg
agagtaaccgattcttcaaaggatgtcaagtcagttgttctaacttcagaaccagaagag
aaattaatggatgatgtagaaacaaaaagcccaagcaaaaataaagatctcattcagtgg
actccactgagtttatcagaatccattcttaatggagaatgtccggactcatctttgata
agcaatcacaacactgtagcatcgagtgaaactaatggtgatacttttttcaactgcatt
gcaggaagtagccaaactttttcacagagtgttagactcaagtcttatccagaaggagct
cagtgtcagaagtttttgttagacaaatcgcctgctttcatgctttctagaaagcccaga
aagtttgtgtatcaagtgccaagttcagatctgtcagatacagtaattggacacaaagat
actcaatcagtatgcttggatcaaatgctcaaagaaaatcccacagttgaggagatatct
agtaaccttaaagaatccacagtcgccagtgaaaatgcagtcgattatcatacacagcca
caagatgtcaaaaggttatctgcagaaatccatgatcttgatcttggactggatatgaca
cagctttccaaggcatttgcagaggatttcacacaagaaataatgccaaaggcactgctt
gatgtgactgtacagtgtgaacaaaatggccaagtgcaaagtaaagcagaacttgagcag
aagaacgaagttggtagtcacaacgacatttctaatttagcagacatatctatgacctct
ccaaacaagtcaacagtcatgcttaccacttttgaaatcagtcacgacagtggttgcccc
accaccttttctgatttggatggtacgacagccttgtgcgcagacatcaaagagtttttt
ccttcttttaaaacggcaaacaacaaggccatttccatacaggatgaggctataatgaag
gccaaagcatcattagatgaagctgcaggggatgtgttgatcaacacgttaaatggaact
gctccaaaatgttatcagactatagaaacattgtgcaaatcagattcaggaagcactaat
gcaaatagattgcccacaggacagaccatcttctctcaccatgcttccagagtgtgtgtt
agtgatgctccaaagagtgacagtccaaagagctttaaaattaatatttcaagctgctct
tcactgcagtcaaatgaatctgattataaaaccggttcaaagaggaatattacagtttca
aatgttggctctcaaacagagactcttttgaaagagaaattggggagaggttcagactca
tcaaagtgcagtcatccaaatttggatttcaagagaagtgctgaaagacagactgtgttc
gaggttagcagcacacacaaatccgccgcagtgaactccagccatggtggggatgaggag
aatggcactttgacagcatctcaaaaggctgatgttacagaattgtgcagtcttttggag
gaagcaaatagtcaacatgaatttacccagttcaaaccgacaaatcctggctcagacaac
cacacagagaaagagtgggatcccgatatactcaacggaattgactttgatgatagtttt
aactgtgatgttgtgaaaggaaagcatcccgtcaagacagacactctttcagtaaatggt
tctaatcgcattcaaattgaagatgctgccaaattaccatgtgccaagtcaaagaaaaca
caaaatgccatggtgactttgtcagtgtctgaagaccgttctttatttgatatgaagagt
gttcagtcttattccagtgataatactccagtcaattgttttggttttaaaactgctaaa
gggacagctataagcatctcagaaaagagtttaaaccacgcaaggcacttttttgaagat
gacgatcagaaagccatatttaatagggaagtcgaggtggatgttggagtaataaagcca
gagcatgctgaaacagagccttcagttaatacttctaacagcatgaacacaaaaaataaa
acctatgttaagactaaacaagatggaaatgtcagctgcggagatgtcagtagagcttgt
aaagagataaatatgcagttggcaggaaatgaaggaccagagcagaattgtttaggtgaa
aaaacagatgttgtttgtgttgactccaatagtcattttggatttagtacagctagtgga
gcaaagctgaaagtgtctgaaacggctcttttggaagcaagaagacttcttaatgatgtt
gacagcttagaggagtcacaaactcacaaactcgttttcagtgcttctggaaaacatgat
acctctatgtcaacaactagccttaagaaaacaaaagcagtttcttggagtaatacatct
atgaaaataagtcagccacaattagtaactgaattttctgatggtgttgataattcttcc
ttcaatagtgtgaaggtctttcgagaacagaaatctagcagtgatcctaaagaagttctt
gcaaagattttttcctcagaaactctatcgactaagtcagaggaaggctatggctttcag
actgccagtgggaaaggagtttccatttcggctggtgccctgaagaaggcaaaggccata
tttaaagactgtgatgaaaatattgacttggaatctgcaaaaatggagggaacgaatggc
aaactggatgttgaactcaaacaaccttcttcagtccagcaaccccctcaggaagtagta
tgtgaggagaaagaccttcagagtgaattttctaagcatccttctgagttgcttcctcct
aatggcaactgtgctttcagtactgctagtggtaggaaagtgtccgtctcagctggagca
ctacagagagctaaagatctgttgtcggggtctgttgatgctttctcatgtgctgatgga
tctccaaagacaaagcaggtgcttgatatccaaatggacactagctctataagaaaacgc
aaaggattctctacagcaggagggaaggctgtggctatctctgctgctgggctgcaaaag
gcaaagaatctctttggagattgtgaagaggagagattgtcttctaaagatcttcagcac
caatgtttaggtgatctctcaaaagagccactgactaaggtacaggaggcatttgcaggc
tgcagtgatatctccttcagccatgagcatgagactgggaattctacaggaaaaaacact
ggattctctacagctggtggaaagaaggtgactttctctgctactgccttgcaaagggca
aagagtctttttaaagattgtgaagaggctagctttgattctgggagtcttcagcatcaa
ggctgtgaaggtttaagcactgccagtggcaaagttaatatctctgaaaaggcactgagt
gaggtgagagcgacatttacaggttatgatgacacttccttgcgtcatggacctgaaaat
tcttcaggaaacaacataggattctctacagcaggagggaagaaagtggctgtctctatt
actgcacttcaaagggccgagagtctttttaaagattgtgacgaggaaaatgtatcatct
aaggaagtcttacctcaaactaagtgttctgaaagcagtgaggacatagtagatggaaac
ctaaagtttgaacaaataaacaagaaaaactatggtttcagcactgcgagtggtaaaggt
gtgtgtgtatcaaaagttgcccttgaggaagcttctaaattattcagagattgtgatgct
caagttaatattactgatagccagctactacagggtgattcctcaaaatgccgtcctcaa
cataaagacagacaaatcgaaaccactctacattctttgccatctaaagcaactcagaat
gaacctgcaaagctagacttgcactctttgaattttaacagttgcacagatacccagcag
aagtactttgagcaggaagcaatggcttgcactgaagctttactggcagatgatgacctg
aatgaatcgtccagtttggcaatgacagaggacaaaaaaagtccacctgttaataatgta
cagacacagggatcttttgcccagaacagaagaaagcgtccatttgattccagaaatcta
gcagattcaggtcagcctcctttgaaaagacaacttctctcagagtttgatcaaacatta
gatgcaaagaccacaggtctcactccactgaaaacctgtccaaacggaactctaagagac
aggcgtgtcttcagttataatgtccacctcaagccgaatgtcactggtccagattggcat
cctgttgaccaaaagtcaaataacctagagcgaccatgttcaactgtgtctgtccaaaac
agacacaactctgaccatacagaaggggtgttcgtgcccccttttcaaaagggtatgaag
actgggacatcaaactgtcaagatgtctctaaagtgtccactggttttataccacctttc
aagaagaaaaacaaagaaacaactgagcctagaaatcaaatagaccaaaatattatttct
gcatcacatagtgatagtgttgcacaatactgtgataggacgagtctgcatgagggttct
aaacctaaaccaaccatttcagtggaaagaatacctctgaaagtcatggatgctgaagag
aaagacacagaggcatacagagagaccttgaacctagccagggatatgcaagacatgaga
ctccgaaagaagaaaaaacagtctattcgtcctttacctggcagcctttaccttgctaag
aattctgatgcccccaggacaggtctgagagatgctgtgggacgcaaatgtcctggtcaa
tacacacaggaggagctgtatcagcatggtgtacatctcaatatcttacaaataacaagt
gagaatgctgaatcattcagatttgactgtaatgacttcttcaaacgtgagcttctcatg
gagtctggtggtctccagctggcagatggaggctggttggttccagacaataagggtact
gtgggaaaagaggaattttatagagcattgtgtgacacccctggtgttgatcccaaattg
atcagtgaagcctgggtattcaaccattaccgatggattgtatggaaacgggcctccatg
gaaagaacttttccagatttgatgggaagcctgtgtttgactccagagcaagtacttctg
cagctcaaattcagatatgatgtggaggtggaccatagtaagagatctgcactcaggagg
atcatggagagggatgacactccagctaagacattagtgctctgtgtatgtggtgttgct
cagacttgtcaaaatcccgaaaagccagtgaaagatgacaaaactcctaatgcaaagatg
gagtcctgtgtggtctggctcacagatggctggtaccccatcaaaggcttgttagaccct
ccactcactgccatgctaaacaagggccgtctccgtatcggtgataagattgtgagcagt
ggagccgagttggttggttcccaagaagcctgtcctccactggaagctcctgaatctctg
atgctaaagatttcagccaacagcacaagacgagctcgatgggacactaaattggggtac
caccgcgaccctcggcctattagcctcccactatcatcactgttcactgctggaggtgtt
gtgagctgtgtgaacattgtggtgttgagaacttaccccactcagtggatggagaagaag
cccaatggtgtctttatatttcgcaatgatcgtgcagaagatcgagaggccagaaaacac
agcaactccaagcaaaaatccatggatcttcttatttccaaaatacagacccaatttgaa
aaagaaatggaaggtaaaaataaaactcgagaacgaaggaggacatttagtcgacatgag
attgaagctctgcaggatggggaagagttgtatgaggcagttgagagggatcttgctgtt
gaggcccatctaagtgcgagacaaatggatgcagtgcataagtacagatgctgtttggag
gaaaagaggcaggcagagcttcaggagcgtgtgcagaaggttgtaatggaagcccaggcg
gccgagggtgggtgtcctaatcgagatgtcactcctgtttggaagctcagtattactgat
gccaatgacctgcagagcaactgtgtttacaccctgaatatctggcgcccttcacaagac
ttgtatggcttgctaagagagggccacagatatagggcttatcacctcgccacatcagag
gggaagaaacgctcaggcattgctcacattcaactcactgccaccaagaaaacattcttc
caggacgttgaggtgtctccagaatggttgcatcagcatttccgtgctcgagaatgcgca
cgcttcagagaacttcaagaccctcagttcagctcaccttgtggggaggtggacattgtg
ggatgcattgtctccatagagggcaaacaaggccatcccccattactgcatcttgtggat
gagaactttgacctggtctctgtgagaacctacagtagtctggagcagttagctctagaa
gagctggtaaagctgcgagcactggtcgctcttagtaatcttcagatgagaccgctctct
gggcctgtgccaagcctttatgcaggagaacaagcagtattctccgtaaaccccaaagaa
tcccatctgcaagaagctatgatctgtctgaagacttttgttcagacttgtgagcgtttt
ttcagcattgcggaggagaaagtctcagatgtggttccttcaggtgtcgtgggctctttt
cggtctccaagaactcctggtgtgcagtctaatccaaaaatcaatggcagagtaacccca
cagcagaaaagcagtgttttctcgcctttcactccactgaataggagcgctcctgtacct
gctaacagcgagggaaaagattccaaaagtttgaaaagaagacgctgttcagattacctg
tcacgtatcccgtcccctccacccctcactcctctgaaatctacagcttctccttacgtt
aacaggaccttcaatcccccacggagatctgtgactcccaaacctccacagaacgagtca
cctcgagcctctcgtcccccaccgggagaggagaagtgggtgcatgatgaagagctggcg
atgatagacacccaggggttactggaaggctga
DBGET
integrated database retrieval system
